BLASTX nr result

ID: Glycyrrhiza24_contig00021711 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00021711
         (585 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003538103.1| PREDICTED: F-box protein At2g27310-like [Gly...   135   5e-30
gb|AFK44578.1| unknown [Medicago truncatula]                          126   3e-27
ref|XP_003539477.1| PREDICTED: F-box protein At2g27310-like [Gly...   113   3e-23
ref|XP_003541964.1| PREDICTED: F-box protein At2g27310-like [Gly...   109   4e-22
gb|AFK34418.1| unknown [Medicago truncatula]                           92   5e-17

>ref|XP_003538103.1| PREDICTED: F-box protein At2g27310-like [Glycine max]
          Length = 341

 Score =  135 bits (340), Expect = 5e-30
 Identities = 73/107 (68%), Positives = 84/107 (78%)
 Frame = +1

Query: 1   VQCVVKVTCCGRPVNGELHVRAVNLVMENTEGGHVSGKEGVAILQRAMETGERKRVNGNA 180
           VQC+VKVTCCG+ V GELHVR VNLVME+TEG  VSGKE V ILQRAME GERKRV+   
Sbjct: 236 VQCLVKVTCCGK-VGGELHVREVNLVMEDTEGRRVSGKESVEILQRAMENGERKRVDHVR 294

Query: 181 NIMKERFEEFTCLTRERRESKHRRQKARDAVSMLLAFLACVLFSFLA 321
           +  K+RF +FTCL +ERRE K RR+KARD VS  LA +A +LF FLA
Sbjct: 295 D--KDRFMKFTCLMKERRERKFRREKARDLVSTFLALVALLLFCFLA 339


>gb|AFK44578.1| unknown [Medicago truncatula]
          Length = 118

 Score =  126 bits (316), Expect = 3e-27
 Identities = 65/107 (60%), Positives = 81/107 (75%)
 Frame = +1

Query: 1   VQCVVKVTCCGRPVNGELHVRAVNLVMENTEGGHVSGKEGVAILQRAMETGERKRVNGNA 180
           VQC+VKVTCCG+   GEL++R V+LVME+ EGG VSGKEGV IL +AME GERK+V+   
Sbjct: 12  VQCMVKVTCCGK-AGGELYMRGVSLVMEDMEGGEVSGKEGVGILMKAMEFGERKKVS-EV 69

Query: 181 NIMKERFEEFTCLTRERRESKHRRQKARDAVSMLLAFLACVLFSFLA 321
             M+ER+E F  L RERRE K +RQK RD VS ++AF+ CV F +LA
Sbjct: 70  GEMEERYERFLGLIRERREMKFKRQKVRDGVSTIVAFVVCVWFCYLA 116


>ref|XP_003539477.1| PREDICTED: F-box protein At2g27310-like [Glycine max]
          Length = 362

 Score =  113 bits (282), Expect = 3e-23
 Identities = 61/108 (56%), Positives = 81/108 (75%), Gaps = 1/108 (0%)
 Frame = +1

Query: 1   VQCVVKVTCCGRPVNGELHVRAVNLVMENTEGGHVSGKEGVAILQRAMETGERKRVNGNA 180
           VQCVVKVTCCG+ V G +HVR V+L ME+TEG HV G++GV ILQ AME G+R+++  +A
Sbjct: 255 VQCVVKVTCCGK-VGGAMHVREVSLTMEDTEGRHVMGRDGVVILQDAMENGKREKL--DA 311

Query: 181 NIMKERFEEFTCLTRERRESKHRRQKARDAVSMLLAF-LACVLFSFLA 321
              KERFE+F+ + RE RE K RR +A D V+ML+AF +  +LF F+A
Sbjct: 312 EKAKERFEKFSIVKREIRERKMRRDRAMDMVAMLIAFAVFALLFCFMA 359


>ref|XP_003541964.1| PREDICTED: F-box protein At2g27310-like [Glycine max]
          Length = 326

 Score =  109 bits (272), Expect = 4e-22
 Identities = 61/108 (56%), Positives = 78/108 (72%), Gaps = 1/108 (0%)
 Frame = +1

Query: 1   VQCVVKVTCCGRPVNGELHVRAVNLVMENTEGGHVSGKEGVAILQRAMETGERKRVNGNA 180
           VQCVVKVTCCG+   G +HVR V+L ME+TEG HV GK+ V ILQ AME G+RK+++   
Sbjct: 219 VQCVVKVTCCGK-AGGAMHVREVSLTMEDTEGRHVMGKDSVVILQDAMENGKRKKLDEVE 277

Query: 181 NIMKERFEEFTCLTRERRESKHRRQKARDAVSMLLAF-LACVLFSFLA 321
              KERFE+F+ + RE RE K RR KA D V+ML+AF +  +LF F+A
Sbjct: 278 --AKERFEKFSIVKREIRERKMRRDKAMDMVAMLVAFAVFALLFWFMA 323


>gb|AFK34418.1| unknown [Medicago truncatula]
          Length = 111

 Score = 92.4 bits (228), Expect = 5e-17
 Identities = 51/106 (48%), Positives = 72/106 (67%)
 Frame = +1

Query: 1   VQCVVKVTCCGRPVNGELHVRAVNLVMENTEGGHVSGKEGVAILQRAMETGERKRVNGNA 180
           VQC+VKVTCCG+ V GE+HV  V+  ME+ +G H+ G++ + IL  AME GER +V+ + 
Sbjct: 4   VQCMVKVTCCGK-VGGEMHVTGVSFSMEDMDGRHLIGRDSLGILVGAMEKGERWKVDIDR 62

Query: 181 NIMKERFEEFTCLTRERRESKHRRQKARDAVSMLLAFLACVLFSFL 318
              K+RFEEF    RERRE K RR++  D   M++  +A V+F+FL
Sbjct: 63  E--KKRFEEFCGRKRERREKKLRRERVMD---MIIMVIAIVVFAFL 103


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