BLASTX nr result

ID: Glycyrrhiza24_contig00021704 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00021704
         (490 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003549029.1| PREDICTED: pentatricopeptide repeat-containi...   110   1e-22
ref|XP_002274656.2| PREDICTED: pentatricopeptide repeat-containi...    68   9e-10
emb|CBI32673.3| unnamed protein product [Vitis vinifera]               68   9e-10
emb|CAN83542.1| hypothetical protein VITISV_021357 [Vitis vinifera]    64   2e-08

>ref|XP_003549029.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42450,
           mitochondrial-like [Glycine max]
          Length = 506

 Score =  110 bits (275), Expect = 1e-22
 Identities = 53/81 (65%), Positives = 67/81 (82%)
 Frame = +2

Query: 248 LTETLHAQATKRDTNVVQTNIQPCSLDSTSFHVACHMFEEMSDLTVSSATAIIGGFAKWH 427
           +T+T HA ATK + +V  ++I P +LDST+FHVAC +FEEMSDLTV+SAT +I GF K H
Sbjct: 1   MTKTHHANATKHEASVAHSDINPYNLDSTTFHVACQLFEEMSDLTVASATTMIQGFVKRH 60

Query: 428 CHEEAIYLFSRLLASKIIRPN 490
           CHE+AIYLFS++LASK IRPN
Sbjct: 61  CHEDAIYLFSKMLASK-IRPN 80


>ref|XP_002274656.2| PREDICTED: pentatricopeptide repeat-containing protein At5g42450,
           mitochondrial-like [Vitis vinifera]
          Length = 538

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 38/90 (42%), Positives = 56/90 (62%), Gaps = 2/90 (2%)
 Frame = +2

Query: 227 HVVSCGYLTET--LHAQATKRDTNVVQTNIQPCSLDSTSFHVACHMFEEMSDLTVSSATA 400
           H ++C  L E+  +H +A K  T +++ +I      S +   AC +F+E+ +  V SATA
Sbjct: 22  HALACNQLKESQRIHGRAIKLGTTILEPDIVCSYSASKALWDACKLFDEVPNWDVVSATA 81

Query: 401 IIGGFAKWHCHEEAIYLFSRLLASKIIRPN 490
            IG FA++H HEEAIY FSR+LA   I+PN
Sbjct: 82  TIGCFARYHHHEEAIYFFSRMLALN-IKPN 110


>emb|CBI32673.3| unnamed protein product [Vitis vinifera]
          Length = 819

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 38/90 (42%), Positives = 56/90 (62%), Gaps = 2/90 (2%)
 Frame = +2

Query: 227 HVVSCGYLTET--LHAQATKRDTNVVQTNIQPCSLDSTSFHVACHMFEEMSDLTVSSATA 400
           H ++C  L E+  +H +A K  T +++ +I      S +   AC +F+E+ +  V SATA
Sbjct: 303 HALACNQLKESQRIHGRAIKLGTTILEPDIVCSYSASKALWDACKLFDEVPNWDVVSATA 362

Query: 401 IIGGFAKWHCHEEAIYLFSRLLASKIIRPN 490
            IG FA++H HEEAIY FSR+LA   I+PN
Sbjct: 363 TIGCFARYHHHEEAIYFFSRMLALN-IKPN 391


>emb|CAN83542.1| hypothetical protein VITISV_021357 [Vitis vinifera]
          Length = 795

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 37/88 (42%), Positives = 53/88 (60%), Gaps = 2/88 (2%)
 Frame = +2

Query: 233 VSCGYLTET--LHAQATKRDTNVVQTNIQPCSLDSTSFHVACHMFEEMSDLTVSSATAII 406
           ++C  L E+   H +A K  T +++ +I      S     AC +F+E+ +  V SATA I
Sbjct: 281 LACNQLKESQRAHGRAVKLGTTILEPDIVCSYSASKELWDACKLFDEVPNWDVVSATATI 340

Query: 407 GGFAKWHCHEEAIYLFSRLLASKIIRPN 490
           G FA++H HEEAIY FSR+LA   I+PN
Sbjct: 341 GCFARYHHHEEAIYFFSRMLALN-IKPN 367


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