BLASTX nr result

ID: Glycyrrhiza24_contig00021693 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00021693
         (628 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003548317.1| PREDICTED: probable cyclic nucleotide-gated ...   293   2e-77
ref|XP_003534112.1| PREDICTED: probable cyclic nucleotide-gated ...   292   4e-77
gb|AFK49438.1| unknown [Lotus japonicus]                              286   2e-75
ref|XP_003548315.1| PREDICTED: probable cyclic nucleotide-gated ...   273   1e-71
ref|XP_003534111.1| PREDICTED: probable cyclic nucleotide-gated ...   271   7e-71

>ref|XP_003548317.1| PREDICTED: probable cyclic nucleotide-gated ion channel 20,
            chloroplastic-like [Glycine max]
          Length = 766

 Score =  293 bits (750), Expect = 2e-77
 Identities = 146/158 (92%), Positives = 153/158 (96%)
 Frame = -1

Query: 628  AICERLRQKTYIKGSRILRQGGLVEKMVFVVRGKLESIGEDGIRVPLSEGDACGEELLTW 449
            AICERLRQKTYIKGS+IL QGGLVEKMVFVVRGKLESIGEDG R+PLSEGD+CGEELLTW
Sbjct: 609  AICERLRQKTYIKGSKILSQGGLVEKMVFVVRGKLESIGEDGTRIPLSEGDSCGEELLTW 668

Query: 448  YLEHSSVSTDGRKVRLPGQRLVSNRTVRCLTNVEAFSLCAADLEEVTILFTRFLRSPRVQ 269
            YLEHSSVSTDGRKVRLPGQRLVSNRTVRCLTNVE+FSL A+D+EEVTILFTRFLRSP VQ
Sbjct: 669  YLEHSSVSTDGRKVRLPGQRLVSNRTVRCLTNVESFSLSASDIEEVTILFTRFLRSPCVQ 728

Query: 268  GALRYESPYWRSLAATRIQVAWRYRKKRLSRVNSSQSN 155
            GALRYESPYWRSLAATRIQVAWRYRKKRLSRVNSS S+
Sbjct: 729  GALRYESPYWRSLAATRIQVAWRYRKKRLSRVNSSPSD 766


>ref|XP_003534112.1| PREDICTED: probable cyclic nucleotide-gated ion channel 20,
            chloroplastic-like [Glycine max]
          Length = 766

 Score =  292 bits (747), Expect = 4e-77
 Identities = 145/158 (91%), Positives = 153/158 (96%)
 Frame = -1

Query: 628  AICERLRQKTYIKGSRILRQGGLVEKMVFVVRGKLESIGEDGIRVPLSEGDACGEELLTW 449
            AIC+RLRQKTYIKGS+IL QGGLVEKMVFVVRGKLESIGEDG R+PLSEGD+CGEELLTW
Sbjct: 609  AICDRLRQKTYIKGSKILSQGGLVEKMVFVVRGKLESIGEDGTRIPLSEGDSCGEELLTW 668

Query: 448  YLEHSSVSTDGRKVRLPGQRLVSNRTVRCLTNVEAFSLCAADLEEVTILFTRFLRSPRVQ 269
            YLEHSSVSTDGRKVRLPGQRLVSNRTVRCLTNVE+FSL A+D+EEVTILFTRFLRSP VQ
Sbjct: 669  YLEHSSVSTDGRKVRLPGQRLVSNRTVRCLTNVESFSLSASDIEEVTILFTRFLRSPCVQ 728

Query: 268  GALRYESPYWRSLAATRIQVAWRYRKKRLSRVNSSQSN 155
            GALRYESPYWRSLAATRIQVAWRYRKKRLSRVNSS S+
Sbjct: 729  GALRYESPYWRSLAATRIQVAWRYRKKRLSRVNSSPSD 766


>gb|AFK49438.1| unknown [Lotus japonicus]
          Length = 197

 Score =  286 bits (733), Expect = 2e-75
 Identities = 141/155 (90%), Positives = 150/155 (96%)
 Frame = -1

Query: 628 AICERLRQKTYIKGSRILRQGGLVEKMVFVVRGKLESIGEDGIRVPLSEGDACGEELLTW 449
           A+CERLRQKTYIKGS+IL QG L+EKMVFVVRGKLESIGEDG R+PLSEGDACGEEL+TW
Sbjct: 38  AVCERLRQKTYIKGSKILSQGSLIEKMVFVVRGKLESIGEDGTRMPLSEGDACGEELMTW 97

Query: 448 YLEHSSVSTDGRKVRLPGQRLVSNRTVRCLTNVEAFSLCAADLEEVTILFTRFLRSPRVQ 269
           YLEHSSVS+DGRKVRLPGQRLVSNRTV+CLTNVEAFSL AADLEEVTILFTRFLRSP+VQ
Sbjct: 98  YLEHSSVSSDGRKVRLPGQRLVSNRTVKCLTNVEAFSLSAADLEEVTILFTRFLRSPQVQ 157

Query: 268 GALRYESPYWRSLAATRIQVAWRYRKKRLSRVNSS 164
           GALRYESPYWRSLAA RIQVAWRYR+KRLSRVNSS
Sbjct: 158 GALRYESPYWRSLAANRIQVAWRYRQKRLSRVNSS 192


>ref|XP_003548315.1| PREDICTED: probable cyclic nucleotide-gated ion channel 20,
            chloroplastic-like [Glycine max]
          Length = 772

 Score =  273 bits (699), Expect = 1e-71
 Identities = 136/161 (84%), Positives = 148/161 (91%)
 Frame = -1

Query: 628  AICERLRQKTYIKGSRILRQGGLVEKMVFVVRGKLESIGEDGIRVPLSEGDACGEELLTW 449
            AICERL+QKTYIKGS++L QG LVEKMVFVVRG LES G+DG  VPLSEGDACGEELLTW
Sbjct: 610  AICERLKQKTYIKGSKVLSQGSLVEKMVFVVRGTLESFGDDGTMVPLSEGDACGEELLTW 669

Query: 448  YLEHSSVSTDGRKVRLPGQRLVSNRTVRCLTNVEAFSLCAADLEEVTILFTRFLRSPRVQ 269
            YLEHSSVSTDG+KVR+ GQRL+SNRTVRCLTNVEAFSL AADLEE+TILFTRFLR+P VQ
Sbjct: 670  YLEHSSVSTDGKKVRVQGQRLLSNRTVRCLTNVEAFSLRAADLEELTILFTRFLRNPHVQ 729

Query: 268  GALRYESPYWRSLAATRIQVAWRYRKKRLSRVNSSQSN*SL 146
            GALRY SPYWRSLAA RIQVAWRYRKKRLSR N+SQS+ +L
Sbjct: 730  GALRYVSPYWRSLAANRIQVAWRYRKKRLSRANTSQSDQTL 770


>ref|XP_003534111.1| PREDICTED: probable cyclic nucleotide-gated ion channel 20,
            chloroplastic-like [Glycine max]
          Length = 770

 Score =  271 bits (693), Expect = 7e-71
 Identities = 135/163 (82%), Positives = 148/163 (90%)
 Frame = -1

Query: 628  AICERLRQKTYIKGSRILRQGGLVEKMVFVVRGKLESIGEDGIRVPLSEGDACGEELLTW 449
            AICERL+QKTYIKGS++L QGGLVEKMVFVVRGKLES G+DG  VPLSEGDACGEELLTW
Sbjct: 608  AICERLKQKTYIKGSKVLSQGGLVEKMVFVVRGKLESFGDDGTIVPLSEGDACGEELLTW 667

Query: 448  YLEHSSVSTDGRKVRLPGQRLVSNRTVRCLTNVEAFSLCAADLEEVTILFTRFLRSPRVQ 269
            YLEHSSVSTDG+K+R+ GQR +SNRT+RCLTNVEAFSL AADLEE+TILFTRFLR+P V 
Sbjct: 668  YLEHSSVSTDGKKLRVQGQRFLSNRTIRCLTNVEAFSLHAADLEELTILFTRFLRNPHVL 727

Query: 268  GALRYESPYWRSLAATRIQVAWRYRKKRLSRVNSSQSN*SLRS 140
            GALR  SPYWRSLAA RIQVAWRYRKKRLSR N+SQSN +L S
Sbjct: 728  GALRNVSPYWRSLAANRIQVAWRYRKKRLSRANTSQSNQTLMS 770


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