BLASTX nr result

ID: Glycyrrhiza24_contig00021669 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00021669
         (315 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003526188.1| PREDICTED: pentatricopeptide repeat-containi...   169   3e-40
ref|XP_003541012.1| PREDICTED: pentatricopeptide repeat-containi...   167   6e-40
gb|ACU24165.1| unknown [Glycine max]                                  167   8e-40
ref|XP_003539564.1| PREDICTED: pentatricopeptide repeat-containi...   161   5e-38
ref|XP_003541878.1| PREDICTED: pentatricopeptide repeat-containi...   153   1e-35

>ref|XP_003526188.1| PREDICTED: pentatricopeptide repeat-containing protein At4g04790,
            mitochondrial-like [Glycine max]
          Length = 1117

 Score =  169 bits (427), Expect = 3e-40
 Identities = 86/104 (82%), Positives = 92/104 (88%)
 Frame = +1

Query: 4    ANVKPDSHTFSYLISNCETEEDINKYYEELNQSGTQPTKKIFMALINAYAACGELEKAKQ 183
            ANVKPDSHTF YLI NCETEEDI KY EE+ QSG   TK+IFMALIN+YAA G+LEKAKQ
Sbjct: 812  ANVKPDSHTFYYLIQNCETEEDIIKYCEEMKQSGVHATKQIFMALINSYAASGKLEKAKQ 871

Query: 184  VVLDPRIPLKSLNDIKSVLVSALASHGQLSEALLIYEEIKKAGH 315
            VVLD  IP KSLN+IKSVLVSALASHGQLSEALL+YEEIKKAGH
Sbjct: 872  VVLDSNIPNKSLNEIKSVLVSALASHGQLSEALLVYEEIKKAGH 915


>ref|XP_003541012.1| PREDICTED: pentatricopeptide repeat-containing protein At4g04790,
           mitochondrial-like [Glycine max]
          Length = 346

 Score =  167 bits (424), Expect = 6e-40
 Identities = 85/104 (81%), Positives = 93/104 (89%)
 Frame = +1

Query: 4   ANVKPDSHTFSYLISNCETEEDINKYYEELNQSGTQPTKKIFMALINAYAACGELEKAKQ 183
           ANVKPDS T+SYLI NCE EEDI KY EE+ QSG Q TK+IFMALIN+YAA G++EKAKQ
Sbjct: 77  ANVKPDSQTYSYLIRNCEKEEDIMKYCEEIKQSGVQATKQIFMALINSYAASGKMEKAKQ 136

Query: 184 VVLDPRIPLKSLNDIKSVLVSALASHGQLSEALLIYEEIKKAGH 315
           VVLDP IP KSLN+IKSVLVSALASHGQLSEALL+YEEIKKAGH
Sbjct: 137 VVLDPIIPNKSLNEIKSVLVSALASHGQLSEALLVYEEIKKAGH 180


>gb|ACU24165.1| unknown [Glycine max]
          Length = 378

 Score =  167 bits (423), Expect = 8e-40
 Identities = 85/104 (81%), Positives = 93/104 (89%)
 Frame = +1

Query: 4   ANVKPDSHTFSYLISNCETEEDINKYYEELNQSGTQPTKKIFMALINAYAACGELEKAKQ 183
           ANVKPDS TFSYLI NCE EEDI KY EE+ QSG Q TK+IFMALIN+YAA G++EKA+Q
Sbjct: 109 ANVKPDSQTFSYLIRNCEKEEDIMKYCEEIKQSGVQATKQIFMALINSYAASGKMEKAEQ 168

Query: 184 VVLDPRIPLKSLNDIKSVLVSALASHGQLSEALLIYEEIKKAGH 315
           VVLDP IP KSLN+IKSVLVSALASHGQLSEALL+YEEIKKAGH
Sbjct: 169 VVLDPIIPNKSLNEIKSVLVSALASHGQLSEALLVYEEIKKAGH 212


>ref|XP_003539564.1| PREDICTED: pentatricopeptide repeat-containing protein At4g04790,
           mitochondrial [Glycine max]
          Length = 755

 Score =  161 bits (408), Expect = 5e-38
 Identities = 81/104 (77%), Positives = 91/104 (87%)
 Frame = +1

Query: 4   ANVKPDSHTFSYLISNCETEEDINKYYEELNQSGTQPTKKIFMALINAYAACGELEKAKQ 183
           A+VKPDS TFSYLISN ETEEDI KYYEEL QSG   TK+IFMAL+NAYAACG+LEKAK+
Sbjct: 518 ADVKPDSQTFSYLISNSETEEDIVKYYEELKQSGIVATKQIFMALVNAYAACGQLEKAKK 577

Query: 184 VVLDPRIPLKSLNDIKSVLVSALASHGQLSEALLIYEEIKKAGH 315
           V+LDP IP KSLN IK  LVS LASHG+LSEAL+IYEEIK++GH
Sbjct: 578 VILDPLIPPKSLNQIKGFLVSVLASHGKLSEALVIYEEIKQSGH 621


>ref|XP_003541878.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21880,
           mitochondrial-like [Glycine max]
          Length = 705

 Score =  153 bits (387), Expect = 1e-35
 Identities = 78/104 (75%), Positives = 89/104 (85%)
 Frame = +1

Query: 4   ANVKPDSHTFSYLISNCETEEDINKYYEELNQSGTQPTKKIFMALINAYAACGELEKAKQ 183
           A+VKPDS TFS LISN ET+EDI KYYEEL QSG   TK+IFMALINAYAACG+LEKAK+
Sbjct: 472 ADVKPDSQTFSCLISNSETKEDIAKYYEELKQSGIVATKQIFMALINAYAACGQLEKAKK 531

Query: 184 VVLDPRIPLKSLNDIKSVLVSALASHGQLSEALLIYEEIKKAGH 315
           V+LDP IP KSLN IK  LVS LASHGQLS AL+IY++IK++GH
Sbjct: 532 VILDPLIPPKSLNQIKGFLVSVLASHGQLSGALVIYDKIKQSGH 575


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