BLASTX nr result

ID: Glycyrrhiza24_contig00021661 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00021661
         (992 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003606020.1| F-box family protein [Medicago truncatula] g...   286   7e-75
ref|XP_003602875.1| FBD-associated F-box protein [Medicago trunc...   254   2e-65
ref|XP_003526558.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g...   252   1e-64
ref|XP_003608305.1| F-box/LRR-repeat protein [Medicago truncatul...   244   2e-62
ref|XP_003617104.1| F-box family-9 [Medicago truncatula] gi|3555...   238   2e-60

>ref|XP_003606020.1| F-box family protein [Medicago truncatula]
           gi|357476013|ref|XP_003608292.1| F-box family protein
           [Medicago truncatula] gi|355507075|gb|AES88217.1| F-box
           family protein [Medicago truncatula]
           gi|355509347|gb|AES90489.1| F-box family protein
           [Medicago truncatula]
          Length = 489

 Score =  286 bits (731), Expect = 7e-75
 Identities = 164/283 (57%), Positives = 198/283 (69%), Gaps = 1/283 (0%)
 Frame = -1

Query: 989 NVQRLGFSVECDIENILPCFFSSQTLTSLELYVSPKGCYSSGKILFPKSLNLPALTILQL 810
           NVQRLG SV+ DI +ILPC  S +TLTSL+L VSPKG ++ G+ LFPKSL+LPALT L L
Sbjct: 128 NVQRLGISVKGDICHILPCVSSCRTLTSLKLSVSPKGRHNYGRTLFPKSLDLPALTSLHL 187

Query: 809 ENFAFCASDDDHVEPFSAFIRLNSLILHCCTVRDAQTLCISSATLVNLTMRSNSSEFSKI 630
            NF FCASD    EPFS F +LNSL++  CTV+DAQ LCI S TLVNLTMR++SS+  KI
Sbjct: 188 GNFVFCASDKGRTEPFSGFNKLNSLVIDNCTVKDAQILCILSETLVNLTMRNHSSDVYKI 247

Query: 629 ELFAPSLCSFAFTGNPHQKLCGSHLSSVTQVSIDAEMWSNDXXXXXXXXXXXXXLSGIKS 450
           EL APSL +FAFTG P+QKLCGS+LSSV QV+IDAEM SN              L+ IKS
Sbjct: 248 ELSAPSLSTFAFTGTPYQKLCGSNLSSVKQVNIDAEMLSNYTEPPLVLLSWLLELANIKS 307

Query: 449 LTVTTTTLRILDMVPDLLEVKLPSLCYLKSLKVKPRPLSNRFFTMXXXXXXXXXXXKSRK 270
           LTV+ +TL++L ++PDLL+ KL SLC LKSL+V+ +PLS                     
Sbjct: 308 LTVSASTLQVLSLIPDLLKDKLTSLCNLKSLRVQLKPLS--------------YGLSMTL 353

Query: 269 EAAKLLIAFKAGW-PSSPIPDGILDFLLLNSPLSKVDIIDFSR 144
             AKL    KAG  PSSPIPDGI+DFL+ NSP ++VDIID SR
Sbjct: 354 RTAKLQKEVKAGQEPSSPIPDGIVDFLIQNSPSAEVDIIDSSR 396


>ref|XP_003602875.1| FBD-associated F-box protein [Medicago truncatula]
           gi|355491923|gb|AES73126.1| FBD-associated F-box protein
           [Medicago truncatula]
          Length = 403

 Score =  254 bits (649), Expect = 2e-65
 Identities = 156/281 (55%), Positives = 188/281 (66%), Gaps = 2/281 (0%)
 Frame = -1

Query: 989 NVQRLGFSVECDIENILPCFFSSQTLTSLELYVSPKGCYSSGKILFPKSLNLPALTILQL 810
           NVQ L  S  CDIE I    FS +TLT L+LY  P+      K LFPKSLNLPALTIL L
Sbjct: 125 NVQELKLSYLCDIELISNSIFSCKTLTCLKLYAYPRTDIKE-KTLFPKSLNLPALTILHL 183

Query: 809 ENFAFCASDDD-HVEPFSAFIRLNSLILHCCTVRDAQTLCISSATLVNLTMRSNSSEFSK 633
            NFAFC SD++  VEPFS F RLNSL+L+ C ++DA TLCISSATLVN T+RS S ++ K
Sbjct: 184 GNFAFCPSDNNPQVEPFSTFKRLNSLVLYNCALKDAVTLCISSATLVNFTVRSYSYDYYK 243

Query: 632 IELFAPSLCSFAFTGNPHQKLCGSHLSSVTQVSIDAEMWSNDXXXXXXXXXXXXXLSGIK 453
           IEL AP L +FAF G P QKL GS LS V  V IDAE+ S +             L+  K
Sbjct: 244 IELCAPCLGTFAFIGKPFQKLSGSSLSYVKHVDIDAEILSMEMEPPLFLLNWLFKLTNTK 303

Query: 452 SLTVTTTTLRILDMVPDLLEVKLPSLCYLKSLKVKPRPLSNRFFTMXXXXXXXXXXXKSR 273
           SLTVT +TL++L +  D+L++KLPSL  LKSLKVK  PL+ RF  M           KSR
Sbjct: 304 SLTVTASTLQVLSLNSDVLKIKLPSLGNLKSLKVKREPLAYRFRKM--LMEAKLQEIKSR 361

Query: 272 KEAAKLLIAFKAGW-PSSPIPDGILDFLLLNSPLSKVDIID 153
           KEAAKL  +FKAG  PS+PIPDGI++FLL NSP ++V ++D
Sbjct: 362 KEAAKLRKSFKAGLEPSAPIPDGIINFLLQNSPSAQVYMVD 402


>ref|XP_003526558.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g78750-like [Glycine
           max]
          Length = 384

 Score =  252 bits (643), Expect = 1e-64
 Identities = 150/288 (52%), Positives = 194/288 (67%), Gaps = 6/288 (2%)
 Frame = -1

Query: 989 NVQRLGFSVECDIENILPCFFSSQTLTSLELYVSPKGCYSSGKILFPKSLNLPALTILQL 810
           NV++LG SV+CDI ++  C FS QTLTSL+L V P+G Y  G  LFPKSLNL ALT L L
Sbjct: 115 NVRQLGISVKCDIRDVPQCVFSCQTLTSLKLSVCPRG-YIYGSTLFPKSLNLTALTTLHL 173

Query: 809 ENFAFCASDDDH---VEPFSAFIRLNSLILHCCTVRDAQTLCISSATLVNLTMRSNSS-E 642
           ++F FC  DDD     EPF A  RL  L +  CTV+DA+ LCISSATLV+LTMRS+ S +
Sbjct: 174 QHFTFCKGDDDDDDMAEPFYACRRLCDLTIDYCTVKDARILCISSATLVSLTMRSDQSGD 233

Query: 641 FSKIELFAPSLCSFAFTGNPHQKLCGSHLSSVTQVSIDAEMWSNDXXXXXXXXXXXXXLS 462
           F KI L  P+LC+FAFTG P+Q+L GS+LSS+ +VSIDAE+WS               L+
Sbjct: 234 FYKIVLSTPNLCAFAFTGAPYQQLLGSNLSSLERVSIDAEIWSTSLESPLILLSWLLELA 293

Query: 461 GIKSLTVTTTTLRILDMVPDLLEVKLPSLCYLKSLKVKPRPLSNRFFTMXXXXXXXXXXX 282
            +KSLTV+ +TL++L ++P+LL++KLP L  LKSLKV+ +PLS  F              
Sbjct: 294 NVKSLTVSASTLQVLFLIPELLKIKLPCLGNLKSLKVELKPLSPIF-------------- 339

Query: 281 KSRKEAAKLLIAFKAGWPSS--PIPDGILDFLLLNSPLSKVDIIDFSR 144
             R +AAK   ++KA    S  P+PDGI+DFLL NSP +KVD+IDF+R
Sbjct: 340 SMRLKAAK---SWKAALKPSPPPMPDGIVDFLLQNSPSAKVDMIDFAR 384


>ref|XP_003608305.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355509360|gb|AES90502.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 482

 Score =  244 bits (624), Expect = 2e-62
 Identities = 147/280 (52%), Positives = 179/280 (63%), Gaps = 3/280 (1%)
 Frame = -1

Query: 989 NVQRLGFSVECDIENILPCFFSSQTLTSLELYVSPK-GCYSSGKILFPKSLNLPALTILQ 813
           ++Q LG SV  D   I+ C  S + LTSL L + PK G  S+  ILFPKSLNLP LT L 
Sbjct: 136 HLQDLGISVNGDCGLIMSCVSSCRALTSLMLSIYPKDGICSNSGILFPKSLNLPTLTNLY 195

Query: 812 LENFAFCASDDDHVEPFSAFIRLNSLILHCCTVRDAQTLCISSATLVNLTMRSNSSEFSK 633
           L NF FC  ++   EPF AF +L SL++  C VRDAQ L ISS TLVN  MR+ S +F+K
Sbjct: 196 LTNFNFCGGENGCAEPFLAFPKLTSLVIRSCRVRDAQILRISSETLVNFKMRNYSEDFAK 255

Query: 632 IELFAPSLCSFAFTGNPHQKLCGSHLSSVTQVSIDAEMWSNDXXXXXXXXXXXXXLSGIK 453
           IEL APSLC+F FTG P QK+CGS LSSV QV I AEM+S               L+ +K
Sbjct: 256 IELCAPSLCTFTFTGTPVQKICGSGLSSVKQVKIKAEMFSRWDEPPLILFDWLLNLANVK 315

Query: 452 SLTVTTTTLRILDMVPDLLEVKLPSLCYLKSLKVKPRPLSNRFF--TMXXXXXXXXXXXK 279
           SL V++TTLRIL +VPDLLEVKLPSLC LKS+++K    SN+     +           K
Sbjct: 316 SLMVSSTTLRILSLVPDLLEVKLPSLCNLKSMEIKLETCSNQMALPNLVKEAMLKKAAAK 375

Query: 278 SRKEAAKLLIAFKAGWPSSPIPDGILDFLLLNSPLSKVDI 159
           SRKEAAKL  AFKA     PIPDGI++FL  NS  ++V+I
Sbjct: 376 SRKEAAKLRKAFKARLEPPPIPDGIVEFLRQNSQSAEVNI 415


>ref|XP_003617104.1| F-box family-9 [Medicago truncatula] gi|355518439|gb|AET00063.1|
           F-box family-9 [Medicago truncatula]
          Length = 402

 Score =  238 bits (607), Expect = 2e-60
 Identities = 145/289 (50%), Positives = 182/289 (62%), Gaps = 1/289 (0%)
 Frame = -1

Query: 989 NVQRLGFSVECDIENILPCFFSSQTLTSLELYVSPKGCYSSGKILFPKSLNLPALTILQL 810
           N+QRL   V C I  I P  FS QTLT LELY   +        LFPKSLNLP+LT L L
Sbjct: 122 NIQRLRLYVGCHIAQIPPSVFSCQTLTHLELYFGEQ-------TLFPKSLNLPSLTSLYL 174

Query: 809 ENFAFCASDDDHVEPFSAFIRLNSLILHCCTVRDAQTLCISSATLVNLTMRSNSSEFSKI 630
           +NFAFCA ++   EPFSAF RLNSL L  C VRD  TLCISSATLV+ T+RS+S +F +I
Sbjct: 175 KNFAFCADENGRAEPFSAFNRLNSLFLCGCAVRDTLTLCISSATLVSFTVRSHSYDFYEI 234

Query: 629 ELFAPSLCSFAFTGNPHQKLCGSHLSSVTQVSIDAEMWSNDXXXXXXXXXXXXXLSGIKS 450
           EL  PSL +F FTG  ++K+ GS LS V  V ID E++  D             L+ IKS
Sbjct: 235 ELCTPSLGTFGFTGKSYKKIFGSGLSCVKHVDIDVEIFHMDMQPSLILLGWLLGLTDIKS 294

Query: 449 LTVTTTTLRILDMVPDLLEVKLPSLCYLKSLKVKPRPLSNRFFTMXXXXXXXXXXXKSRK 270
           LTVT +TL++L +  ++L+ KLPSL  LK LKV  +PL+  F  +           + RK
Sbjct: 295 LTVTASTLQVLCLNSNILKTKLPSLGNLKLLKVNKKPLAYGFRKL--LIDIKVQKIRPRK 352

Query: 269 EAAKLLIAFKAGW-PSSPIPDGILDFLLLNSPLSKVDIIDFSR*NVHST 126
           E AKL  +FKAG  PS+PIPDGI+DFL+ NSPL+ V+I+D +     ST
Sbjct: 353 EGAKLRKSFKAGLEPSAPIPDGIVDFLIQNSPLADVEIVDCTWRKTQST 401


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