BLASTX nr result

ID: Glycyrrhiza24_contig00021656 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00021656
         (269 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003602221.1| RING finger protein [Medicago truncatula] gi...   138   5e-31
ref|XP_003526705.1| PREDICTED: putative RING-H2 finger protein A...   130   1e-28
gb|ACU24071.1| unknown [Glycine max]                                  128   4e-28
ref|XP_002513558.1| ring finger protein, putative [Ricinus commu...   110   9e-23
ref|XP_002318390.1| predicted protein [Populus trichocarpa] gi|2...   100   2e-19

>ref|XP_003602221.1| RING finger protein [Medicago truncatula]
           gi|355491269|gb|AES72472.1| RING finger protein
           [Medicago truncatula]
          Length = 388

 Score =  138 bits (347), Expect = 5e-31
 Identities = 69/91 (75%), Positives = 75/91 (82%), Gaps = 2/91 (2%)
 Frame = -2

Query: 268 LDTVCQMNEPIIRFPFHIEGRPQAMTCGYKGFKVLC--SEEGQTLLNLPYWGELKIQTIN 95
           LDTVC MNEP+IRFPFHIE + Q  TCGY GFKVLC  SE+ QTLLNLPY   L IQ IN
Sbjct: 34  LDTVCHMNEPLIRFPFHIEEK-QTNTCGYPGFKVLCNESEKNQTLLNLPYMENLSIQKIN 92

Query: 94  YAAQELYVNDPNNCLPKRLLSLNLSGSPYDA 2
           YA QEL+VNDPNNCLPK+LLSLNLS SP+DA
Sbjct: 93  YAKQELFVNDPNNCLPKQLLSLNLSTSPFDA 123


>ref|XP_003526705.1| PREDICTED: putative RING-H2 finger protein ATL21A-like [Glycine
           max]
          Length = 385

 Score =  130 bits (326), Expect = 1e-28
 Identities = 64/90 (71%), Positives = 74/90 (82%), Gaps = 1/90 (1%)
 Frame = -2

Query: 268 LDTVCQMNEPIIRFPFHIEGRPQAMTCGYKGFKVLCSEEGQTLLNLPYWGE-LKIQTINY 92
           LD+VCQ +EP+IRFPF IEG  Q  +CG+ GF V C+  GQTLLNL Y GE L+IQ INY
Sbjct: 32  LDSVCQTHEPVIRFPFRIEGE-QENSCGHPGFSVSCNHNGQTLLNLSYCGEELRIQRINY 90

Query: 91  AAQELYVNDPNNCLPKRLLSLNLSGSPYDA 2
           AAQ+L+VNDPNNCLPKRLLSLNLS SP+DA
Sbjct: 91  AAQQLWVNDPNNCLPKRLLSLNLSASPFDA 120


>gb|ACU24071.1| unknown [Glycine max]
          Length = 385

 Score =  128 bits (322), Expect = 4e-28
 Identities = 63/90 (70%), Positives = 74/90 (82%), Gaps = 1/90 (1%)
 Frame = -2

Query: 268 LDTVCQMNEPIIRFPFHIEGRPQAMTCGYKGFKVLCSEEGQTLLNLPYWGE-LKIQTINY 92
           LD+VCQ +EP+IRFPF IEG  Q  +CG+ GF V C+  GQTLLNL Y GE L+IQ INY
Sbjct: 32  LDSVCQTHEPVIRFPFRIEGE-QENSCGHPGFSVSCNHNGQTLLNLSYCGEELRIQRINY 90

Query: 91  AAQELYVNDPNNCLPKRLLSLNLSGSPYDA 2
           AAQ+L+VNDPNNCLP+RLLSLNLS SP+DA
Sbjct: 91  AAQQLWVNDPNNCLPERLLSLNLSASPFDA 120


>ref|XP_002513558.1| ring finger protein, putative [Ricinus communis]
           gi|223547466|gb|EEF48961.1| ring finger protein,
           putative [Ricinus communis]
          Length = 377

 Score =  110 bits (276), Expect = 9e-23
 Identities = 53/88 (60%), Positives = 64/88 (72%), Gaps = 1/88 (1%)
 Frame = -2

Query: 268 LDTVCQMNEPIIRFPFHIEGRPQAMTCGYKGFKVLC-SEEGQTLLNLPYWGELKIQTINY 92
           L++ C  NEP+IRFPF IE R Q  +CGY GF V C +    TLL LPY G   +Q I+Y
Sbjct: 27  LNSACARNEPVIRFPFRIENR-QFKSCGYPGFDVSCDTNTNHTLLELPYSGTFTVQAIDY 85

Query: 91  AAQELYVNDPNNCLPKRLLSLNLSGSPY 8
           A QEL++NDPNNCLPKR+LSLNLS SP+
Sbjct: 86  ATQELWINDPNNCLPKRILSLNLSNSPF 113


>ref|XP_002318390.1| predicted protein [Populus trichocarpa] gi|222859063|gb|EEE96610.1|
           predicted protein [Populus trichocarpa]
          Length = 237

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 46/88 (52%), Positives = 61/88 (69%), Gaps = 1/88 (1%)
 Frame = -2

Query: 268 LDTVCQMNEPIIRFPFHIEGRPQAMTCGYKGFKVLCSEEGQTLLNLPYWGELKIQTINYA 89
           L T C  NEP+IRFP  I+ R Q+ +CG+ GF + C    +TLL LP  G+ ++Q I+YA
Sbjct: 30  LKTACSRNEPVIRFPLRIKNR-QSRSCGFPGFDISCGSSNETLLELPSSGKFRVQAIDYA 88

Query: 88  AQELYVN-DPNNCLPKRLLSLNLSGSPY 8
            QE+ +N DP NCLP R+LSLNLS SP+
Sbjct: 89  GQEILINDDPENCLPGRILSLNLSNSPF 116


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