BLASTX nr result

ID: Glycyrrhiza24_contig00021642 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00021642
         (617 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003539270.1| PREDICTED: uncharacterized protein LOC100783...   186   2e-45
ref|XP_003637139.1| E3 ubiquitin-protein ligase RNF14 [Medicago ...   177   1e-42
ref|XP_003616299.1| E3 ubiquitin-protein ligase RNF19B [Medicago...   166   4e-39
ref|XP_003600199.1| Ubiquitin-protein ligase/ zinc ion binding p...   155   5e-36
ref|XP_003600198.1| Putative E3 ubiquitin ligase [Medicago trunc...   154   1e-35

>ref|XP_003539270.1| PREDICTED: uncharacterized protein LOC100783146 [Glycine max]
          Length = 509

 Score =  186 bits (473), Expect = 2e-45
 Identities = 90/204 (44%), Positives = 116/204 (56%), Gaps = 42/204 (20%)
 Frame = -1

Query: 533 CGICFDFKPDSDMFRGSSKCNHPFCADCISKHVAAQIDKNVLPKVNCPNPNCCVELKPEH 354
           C ICFD KP SDMF    KCNH FC  C+SK+V  QI +N+L  + CPN NC VELKPE+
Sbjct: 303 CDICFDDKPVSDMFE-EGKCNHLFCTHCMSKYVTTQIQQNILKVIMCPNANCSVELKPEY 361

Query: 353 LQPILPKQVFVLWESARA--------------------------------------RRFC 288
              IL  +V V WE+                                         R FC
Sbjct: 362 FHNILASEVIVRWETVMCESMIVELEKTYCPFKDCSVLLVNDGEKVVTSAECPSCHRLFC 421

Query: 287 AECKVPCHEGLNCNCKEFQKL----DEKDLDRKFVELAKSEMWQTCPKCSIYVQRSGGCE 120
           A+CKVP H  +  +C+EFQ++    DEK L+ KF +LAK E WQ CP+C+++VQR  GC+
Sbjct: 422 AQCKVPWHGSM--SCEEFQEIERNKDEKVLENKFFKLAKEEKWQKCPRCTMFVQRREGCD 479

Query: 119 HITCRCECNFCYMCGKDWVYGHTC 48
           H+TCRC C+FCY+CGK+W+  H C
Sbjct: 480 HMTCRCGCDFCYICGKNWMLVHNC 503


>ref|XP_003637139.1| E3 ubiquitin-protein ligase RNF14 [Medicago truncatula]
           gi|355503074|gb|AES84277.1| E3 ubiquitin-protein ligase
           RNF14 [Medicago truncatula]
          Length = 237

 Score =  177 bits (450), Expect = 1e-42
 Identities = 97/231 (41%), Positives = 123/231 (53%), Gaps = 50/231 (21%)
 Frame = -1

Query: 590 DAHNHKHTKMNGQSSLQQRCGICFDFKPDSDMFRGSS------KCNHPFCADCISKHVAA 429
           DAH  K T           CGICFD K DSD+F   S      KCNH FC DCI K+V  
Sbjct: 18  DAHEAKKT-----------CGICFDTKTDSDIFNIRSTILKRRKCNHLFCVDCICKYVEV 66

Query: 428 QIDKNVLPKVNCPNPNCCVELKPEHLQPILPKQVFVLWE--------------------- 312
           QI+ N   KV CP+PNC V+ KP+HL+ ILPKQ+ V WE                     
Sbjct: 67  QINDNAY-KVLCPSPNCFVKYKPKHLKHILPKQLIVKWEFLASELSKPSEPKTYCPYANC 125

Query: 311 ----------------SARA----RRFCAECKVPCHEGLNC-NCKEFQKLDEKDLDRKFV 195
                           S+R     R+FCA+CKVP H G+NC   ++F++ D+ DLD+KF+
Sbjct: 126 SVLLGKENDIGREFNSSSRCPSCHRQFCAKCKVPWHAGMNCQKFQQFKRNDKNDLDKKFL 185

Query: 194 ELAKSEMWQTCPKCSIYVQRSGGCEHITCRCECNFCYMCGK--DWVYGHTC 48
            LAK + W+ CP C +YV++S GC  + CRC C FCY CGK   +   HTC
Sbjct: 186 VLAKEQQWKRCPNCFMYVKKSAGCSLMKCRCGCKFCYKCGKKRSFTSAHTC 236


>ref|XP_003616299.1| E3 ubiquitin-protein ligase RNF19B [Medicago truncatula]
           gi|355517634|gb|AES99257.1| E3 ubiquitin-protein ligase
           RNF19B [Medicago truncatula]
          Length = 340

 Score =  166 bits (419), Expect = 4e-39
 Identities = 92/209 (44%), Positives = 113/209 (54%), Gaps = 39/209 (18%)
 Frame = -1

Query: 557 GQSSLQQRCGICFDFKPDSDMFRGSSKCNHPFCADCISKHVAAQIDKNVLPKVNCPNPNC 378
           GQSS +  CGICFD   DS+MF  S+ CNHPFC  CI K+             N P    
Sbjct: 150 GQSS-KIFCGICFDSVTDSNMF--STGCNHPFCTKCICKY-------------NVPY--- 190

Query: 377 CVELKPEHLQPILPKQVFVLWESARA---------------------------------- 300
            VELKPEHLQ ILPK++ V WESA                                    
Sbjct: 191 -VELKPEHLQYILPKKIIVDWESANCENSISLKDKIYCPYNNCSLLMVNDAACAVTSCEC 249

Query: 299 ----RRFCAECKVPCHEGLNCNCKEFQK-LDEKDLDRKFVELAKSEMWQTCPKCSIYVQR 135
               R FC +CKVP H  +NC  ++FQK + E  LD+ F++LAK E WQ CPKCS++VQ+
Sbjct: 250 SSCHRLFCVQCKVPWHTDMNC--RQFQKSMSENQLDKNFLKLAKREKWQRCPKCSMHVQK 307

Query: 134 SGGCEHITCRCECNFCYMCGKDWVYGHTC 48
           +GGC H+ CRC  +FCYMCG+ W  GHTC
Sbjct: 308 TGGCMHMHCRCGFHFCYMCGRHWQQGHTC 336


>ref|XP_003600199.1| Ubiquitin-protein ligase/ zinc ion binding protein [Medicago
           truncatula] gi|355489247|gb|AES70450.1|
           Ubiquitin-protein ligase/ zinc ion binding protein
           [Medicago truncatula]
          Length = 206

 Score =  155 bits (392), Expect = 5e-36
 Identities = 83/176 (47%), Positives = 107/176 (60%), Gaps = 10/176 (5%)
 Frame = -1

Query: 545 LQQRCGICFDFKPDSDMFRGSSKCNHPFCADCISKHVAAQIDKNVLPKVN---CPNPNCC 375
           ++  CGICFD K +SDMF+ ++KCNH +C DCI K+V  QI  N L KV    CP+PNC 
Sbjct: 42  MKHTCGICFDLKTNSDMFQ-TTKCNHFYCLDCIRKYVTFQIS-NYLVKVKVITCPSPNCF 99

Query: 374 VELKPEHLQPILPKQVFVLW-----ESARARRFCAECKVPCHEGLNCNCKEFQKLDEKDL 210
           VELKP+ LQ ILPKQV   W     ES+ + +F +  +           K FQ      L
Sbjct: 100 VELKPKQLQHILPKQVTFRWRSLICESSISLKFISYAR-----------KLFQNFK---L 145

Query: 209 DRKFVELAKSEMWQTCPKCSIYVQRSGGCEHITCRCECNFCYMCGKDWVYGH--TC 48
           D+  V+LAK E W+ CPKCS Y++RS GC+++ CRC C FCY CG+    GH  TC
Sbjct: 146 DKSLVKLAKKERWRRCPKCSFYIERSEGCDNMLCRCGCRFCYNCGRKHANGHARTC 201


>ref|XP_003600198.1| Putative E3 ubiquitin ligase [Medicago truncatula]
           gi|355489246|gb|AES70449.1| Putative E3 ubiquitin ligase
           [Medicago truncatula]
          Length = 201

 Score =  154 bits (389), Expect = 1e-35
 Identities = 75/159 (47%), Positives = 103/159 (64%), Gaps = 2/159 (1%)
 Frame = -1

Query: 545 LQQRCGICFDFKPDSDMFRGSSKCNHPFCADCISKHVAAQIDKNVLPK--VNCPNPNCCV 372
           ++  C ICFD K +SDMF+ ++KCNH +C DCI K+V  QI+ N++    + CP+PNC V
Sbjct: 42  MKHTCDICFDLKTNSDMFQ-TTKCNHFYCLDCICKYVTFQINNNLVKVKVITCPSPNCSV 100

Query: 371 ELKPEHLQPILPKQVFVLWESARARRFCAECKVPCHEGLNCNCKEFQKLDEKDLDRKFVE 192
           +LKP+ LQ ILPKQV   WES        +  +P  + ++   K  Q ++   LD KF+E
Sbjct: 101 KLKPKQLQHILPKQVTFRWES-----LIHKSSIP-FKLMSYGRKLIQNIE---LDMKFLE 151

Query: 191 LAKSEMWQTCPKCSIYVQRSGGCEHITCRCECNFCYMCG 75
           LAK E W+ CP+CS YV+R  GC H+ CRC C+FCY CG
Sbjct: 152 LAKRESWKKCPRCSFYVERINGCNHMMCRCGCDFCYNCG 190


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