BLASTX nr result

ID: Glycyrrhiza24_contig00021607 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00021607
         (433 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329111.1| predicted protein [Populus trichocarpa] gi|2...    87   1e-15
ref|XP_002316920.1| predicted protein [Populus trichocarpa] gi|2...    87   1e-15
ref|XP_002532684.1| conserved hypothetical protein [Ricinus comm...    79   4e-13
ref|NP_001118635.1| uncharacterized protein [Arabidopsis thalian...    65   4e-09
gb|AAF35418.1| hypothetical protein [Arabidopsis thaliana] gi|15...    65   6e-09

>ref|XP_002329111.1| predicted protein [Populus trichocarpa] gi|222869780|gb|EEF06911.1|
           predicted protein [Populus trichocarpa]
          Length = 108

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 46/108 (42%), Positives = 64/108 (59%), Gaps = 1/108 (0%)
 Frame = -1

Query: 367 MQSNPEKQNKESLQLPPKGSIC-GHKSSEGATYLGMSHRFRPACTCSNRPGSVRCARHGY 191
           M++  +KQ +  LQ P + S+  G++         +S R R  CTCSNRPGSVRC++HGY
Sbjct: 1   METISQKQTRGRLQPPARQSLGEGNRVRRNNQVASISPRPRSTCTCSNRPGSVRCSKHGY 60

Query: 190 VVPGERLKKRVASKEIXXXXXXXXXXXXXXXXLNFKPTPSRLSNMSMA 47
           +VP ++L++  A+ EI                 NF+PTPSRLSNMSMA
Sbjct: 61  LVPSDKLRRNQANTEILRRALAPPNRRLTLRWFNFQPTPSRLSNMSMA 108


>ref|XP_002316920.1| predicted protein [Populus trichocarpa] gi|222859985|gb|EEE97532.1|
           predicted protein [Populus trichocarpa]
          Length = 109

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 47/109 (43%), Positives = 66/109 (60%), Gaps = 2/109 (1%)
 Frame = -1

Query: 367 MQSNPEKQNKESLQLPPKGSIC-GHKSSEGATYLGMSHRFRPACTCSNRPGSVRCARHGY 191
           M+S  +KQ +  LQLP + ++  G +       + +  R R  CTCSNRPGSVRC++HGY
Sbjct: 1   MESMSQKQARGRLQLPTRQALGEGSRVRRNNQVVSIPPRPRSTCTCSNRPGSVRCSKHGY 60

Query: 190 VVPGERL-KKRVASKEIXXXXXXXXXXXXXXXXLNFKPTPSRLSNMSMA 47
           +VPG++L ++  A+KE+                 NF+PTPSRLSNMSMA
Sbjct: 61  MVPGDKLIRRHQANKELLRRALAPPNRRLTLRWFNFRPTPSRLSNMSMA 109


>ref|XP_002532684.1| conserved hypothetical protein [Ricinus communis]
           gi|223527581|gb|EEF29697.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 117

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 46/117 (39%), Positives = 63/117 (53%), Gaps = 10/117 (8%)
 Frame = -1

Query: 367 MQSNPEKQNKESLQLPPKGSICGHKSSEG---------ATYLGMSHRFRPACTCSNRPGS 215
           MQS  +    E  +LP +  + G+ +            ++    S R R  CTCSNRPGS
Sbjct: 1   MQSLSQTLTTERPRLPARKPVTGNATENNRVRRNYYQHSSGPASSPRPRSTCTCSNRPGS 60

Query: 214 VRCARHGYVVPGERLKK-RVASKEIXXXXXXXXXXXXXXXXLNFKPTPSRLSNMSMA 47
           VRC++HGYV+P ++L++   AS+EI                 NF+PTPSRLSNMSMA
Sbjct: 61  VRCSKHGYVLPSDKLRRHHQASREILRRALAPPNRKMSLRWWNFRPTPSRLSNMSMA 117


>ref|NP_001118635.1| uncharacterized protein [Arabidopsis thaliana]
           gi|26450598|dbj|BAC42411.1| unknown protein [Arabidopsis
           thaliana] gi|332642164|gb|AEE75685.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 106

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 36/75 (48%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
 Frame = -1

Query: 268 GMSHRFRPACTCSNRPGSVRCARHGYVVPG-ERLKKRVA--SKEIXXXXXXXXXXXXXXX 98
           G   R R ACTCS RPGS +CARHG+VVP  ERL ++ +  S+E+               
Sbjct: 30  GSGLRVRVACTCSGRPGSTKCARHGFVVPSDERLMRKASDGSREVLRRALTPPIRRMNLR 89

Query: 97  XLNFKPTPSRLSNMS 53
            LNF+PTPSRL  MS
Sbjct: 90  WLNFRPTPSRLCKMS 104


>gb|AAF35418.1| hypothetical protein [Arabidopsis thaliana]
           gi|15795117|dbj|BAB02381.1| unnamed protein product
           [Arabidopsis thaliana]
          Length = 406

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 40/70 (57%), Positives = 44/70 (62%), Gaps = 3/70 (4%)
 Frame = +3

Query: 45  QAMDMLESLLGVGLKFNHLRPKRRGGGVSALLNISLLATRFFNL---SPGTTYP*RAHRT 215
           Q  D+L+  LGVG KFNH R  RR GGV AL N SLL +  F +   S GTT P RAH  
Sbjct: 298 QTEDILQRRLGVGRKFNHRRFIRRIGGVKALRNTSLLPSLAFRISLSSLGTTNPCRAHFV 357

Query: 216 EPGRLEHVQA 245
           EPGR E VQA
Sbjct: 358 EPGRPEQVQA 367


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