BLASTX nr result

ID: Glycyrrhiza24_contig00021602 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00021602
         (561 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK40149.1| unknown [Medicago truncatula]                          213   2e-53
ref|XP_003606781.1| Copper transporter [Medicago truncatula] gi|...   205   5e-51
ref|NP_001238742.1| uncharacterized protein LOC100306175 [Glycin...   199   3e-49
ref|XP_002313412.1| copper transporter [Populus trichocarpa] gi|...   161   8e-38
ref|XP_002280121.1| PREDICTED: copper transporter 6 [Vitis vinif...   148   7e-34

>gb|AFK40149.1| unknown [Medicago truncatula]
          Length = 164

 Score =  213 bits (541), Expect = 2e-53
 Identities = 111/151 (73%), Positives = 125/151 (82%), Gaps = 6/151 (3%)
 Frame = -1

Query: 483 HMPGMDGMAMSPKAXXXXSN-GTTIMMGHKMH----MTFFWGKDALILFDNWPAGKTGMY 319
           H  GM+GM M PK+    S+   T+MMGHKMH    MTFFWGKDALILF+NWP G TGMY
Sbjct: 8   HGGGMEGMTMPPKSPPSSSSTNNTMMMGHKMHGMMHMTFFWGKDALILFNNWPNGDTGMY 67

Query: 318 VLALIVVFVMSLLVELLSRTRFIKSDSNTFAAGLVQTLLHLVRVGLSYLVMLALMSFNGG 139
           VLALI+VFVM++L+ELLSRTRFIK  SN  AAGL QTLLH++RVGL+YLVMLALMSFNGG
Sbjct: 68  VLALILVFVMAVLIELLSRTRFIKPGSNHVAAGLFQTLLHVLRVGLAYLVMLALMSFNGG 127

Query: 138 VFLVAVLGHALGFFLCSRAFKKP-HHDEGFD 49
           VFLVAVLGHALGFFLCS AF+KP  HDE +D
Sbjct: 128 VFLVAVLGHALGFFLCSSAFRKPKQHDEAYD 158


>ref|XP_003606781.1| Copper transporter [Medicago truncatula]
           gi|355507836|gb|AES88978.1| Copper transporter [Medicago
           truncatula]
          Length = 307

 Score =  205 bits (521), Expect = 5e-51
 Identities = 108/154 (70%), Positives = 121/154 (78%), Gaps = 3/154 (1%)
 Frame = -1

Query: 501 DTDMDEHMPGMDGMAMSPKAXXXXSNGTTIMMGHK---MHMTFFWGKDALILFDNWPAGK 331
           D DMD       GMAM+PK+    ++  T+MMG     MHMTFFWGKDALILFDNWPAG 
Sbjct: 2   DHDMDH------GMAMAPKSSSSTND--TMMMGQMHDMMHMTFFWGKDALILFDNWPAGN 53

Query: 330 TGMYVLALIVVFVMSLLVELLSRTRFIKSDSNTFAAGLVQTLLHLVRVGLSYLVMLALMS 151
           +G YVLALI+VF MS+L+E LS TRFIK  SN   AGLVQTLLH++RVGL+YLVMLALMS
Sbjct: 54  SGKYVLALILVFAMSILIEFLSSTRFIKPGSNPIVAGLVQTLLHVLRVGLAYLVMLALMS 113

Query: 150 FNGGVFLVAVLGHALGFFLCSRAFKKPHHDEGFD 49
           FNGGVFLVAVLGHA+GFF  SRAFKKPH DE FD
Sbjct: 114 FNGGVFLVAVLGHAVGFFFRSRAFKKPHQDENFD 147



 Score =  186 bits (471), Expect = 3e-45
 Identities = 94/140 (67%), Positives = 113/140 (80%), Gaps = 4/140 (2%)
 Frame = -1

Query: 471 MDGMAMSPKAXXXXSNGTTIMMGHKM----HMTFFWGKDALILFDNWPAGKTGMYVLALI 304
           MD M+M+PK+     N +T+MM  KM    HMTFFWGKD+LILF+NWPAG T  YV+AL 
Sbjct: 167 MDEMSMAPKSSSS--NNSTMMMSLKMQGMIHMTFFWGKDSLILFNNWPAGNTSKYVMALF 224

Query: 303 VVFVMSLLVELLSRTRFIKSDSNTFAAGLVQTLLHLVRVGLSYLVMLALMSFNGGVFLVA 124
           ++F+ S+L+ELLS T F K  SN   AGLVQTLLH++RVGL+YL+MLALMSFNGGVFLV 
Sbjct: 225 MIFIASMLMELLSYTPF-KPGSNRMVAGLVQTLLHVLRVGLAYLIMLALMSFNGGVFLVV 283

Query: 123 VLGHALGFFLCSRAFKKPHH 64
           VLGHALGFF+CSRAFK+PHH
Sbjct: 284 VLGHALGFFVCSRAFKEPHH 303


>ref|NP_001238742.1| uncharacterized protein LOC100306175 [Glycine max]
           gi|255627769|gb|ACU14229.1| unknown [Glycine max]
          Length = 155

 Score =  199 bits (505), Expect = 3e-49
 Identities = 104/151 (68%), Positives = 121/151 (80%), Gaps = 4/151 (2%)
 Frame = -1

Query: 489 DEHMPGMDGMAMSPKAXXXXSNGTTI--MMGHKM--HMTFFWGKDALILFDNWPAGKTGM 322
           D HM GM GM  +P +     NGTT+  MM HKM  HMTFFWGKDA ILF+NWP GK+GM
Sbjct: 3   DGHMHGMGGMVPTPPST----NGTTMTMMMHHKMMMHMTFFWGKDADILFNNWPGGKSGM 58

Query: 321 YVLALIVVFVMSLLVELLSRTRFIKSDSNTFAAGLVQTLLHLVRVGLSYLVMLALMSFNG 142
           YVLAL+ VFVM++LVELLS TRFIK  SN   +GL++TLLH++RVGL+YLVMLALMSFNG
Sbjct: 59  YVLALVFVFVMAVLVELLSHTRFIKPGSNHVVSGLIKTLLHVLRVGLAYLVMLALMSFNG 118

Query: 141 GVFLVAVLGHALGFFLCSRAFKKPHHDEGFD 49
           GVFLVAVLGHALGFF+ + AF KP  +EGFD
Sbjct: 119 GVFLVAVLGHALGFFVSTVAFNKPPQNEGFD 149


>ref|XP_002313412.1| copper transporter [Populus trichocarpa]
           gi|222849820|gb|EEE87367.1| copper transporter [Populus
           trichocarpa]
          Length = 155

 Score =  161 bits (407), Expect = 8e-38
 Identities = 87/151 (57%), Positives = 104/151 (68%), Gaps = 7/151 (4%)
 Frame = -1

Query: 495 DMDEHMPGMDGMAMSPKAXXXXSNGTTIMMGHKM--HMTFFWGKDALILFDNWPAGKTGM 322
           D D H+PGM     +P       NGT   M HKM  HMTFFWGKD LILF  WP   TGM
Sbjct: 2   DPDHHLPGMSPPPSTPM------NGTD-GMDHKMMTHMTFFWGKDTLILFSGWPGTSTGM 54

Query: 321 YVLALIVVFVMSLLVELLSRTRFIKSDSNTFAAGLVQTLLHLVRVGLSYLVMLALMSFNG 142
           YVLAL+ +FV+++LVE LS  R +K  SN  AAGL+Q L+H VRVGL+Y+VMLA+MSFNG
Sbjct: 55  YVLALVFIFVLAVLVEWLSHCRLVKPGSNNVAAGLIQALMHAVRVGLAYMVMLAVMSFNG 114

Query: 141 GVFLVAVLGHALGFFLC-SRAFK----KPHH 64
           GVF+VAV GH +GFF+  SR FK     P+H
Sbjct: 115 GVFIVAVAGHLVGFFIFGSRVFKDTEMPPYH 145


>ref|XP_002280121.1| PREDICTED: copper transporter 6 [Vitis vinifera]
           gi|321496078|gb|ADW93916.1| copper transporter [Vitis
           vinifera]
          Length = 151

 Score =  148 bits (373), Expect = 7e-34
 Identities = 76/125 (60%), Positives = 88/125 (70%)
 Frame = -1

Query: 468 DGMAMSPKAXXXXSNGTTIMMGHKMHMTFFWGKDALILFDNWPAGKTGMYVLALIVVFVM 289
           D M MSP             M   MHMTF+WGK+A ILF  WP  ++GMY LALIVVFVM
Sbjct: 6   DHMHMSPPPANSTGMSPMHHMEMMMHMTFYWGKEAEILFSGWPGARSGMYALALIVVFVM 65

Query: 288 SLLVELLSRTRFIKSDSNTFAAGLVQTLLHLVRVGLSYLVMLALMSFNGGVFLVAVLGHA 109
            ++VE LS  R IK  S   AAGLVQTLLH +R+GL+Y+VMLALMSFNGGVFLVAV GHA
Sbjct: 66  GIIVEWLSYCRLIKPGSTHAAAGLVQTLLHTIRIGLAYMVMLALMSFNGGVFLVAVAGHA 125

Query: 108 LGFFL 94
           +GF +
Sbjct: 126 VGFLV 130


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