BLASTX nr result

ID: Glycyrrhiza24_contig00021596 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00021596
         (265 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003541953.1| PREDICTED: WRKY transcription factor 6 [Glyc...    82   3e-14
ref|XP_003540834.1| PREDICTED: WRKY transcription factor 6-like ...    64   2e-08
ref|XP_003526336.1| PREDICTED: probable WRKY transcription facto...    61   8e-08

>ref|XP_003541953.1| PREDICTED: WRKY transcription factor 6 [Glycine max]
          Length = 614

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 44/78 (56%), Positives = 50/78 (64%)
 Frame = -2

Query: 234 MARGGGLSIDSDPTGSFFHHKPIVLNSFPEDXXXXXXXXSHHPKWKLGHNMDGTVNKRXX 55
           MARGGGLSIDSDP GSF  H+PIVLNSFPED          H KWKLG NMD TV+++  
Sbjct: 1   MARGGGLSIDSDPIGSFLPHEPIVLNSFPEDNKDNNNSRQQH-KWKLGTNMDATVSRKSS 59

Query: 54  XXXXXXXXXTIPFQVNLS 1
                    TIPFQ +L+
Sbjct: 60  PSSTSNTNTTIPFQDHLT 77


>ref|XP_003540834.1| PREDICTED: WRKY transcription factor 6-like [Glycine max]
          Length = 614

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 39/82 (47%), Positives = 48/82 (58%), Gaps = 4/82 (4%)
 Frame = -2

Query: 234 MARGGGLSIDSDPTGSFFHHKPIVLNSFPEDXXXXXXXXSHHPKWKL----GHNMDGTVN 67
           M R GGLS+DSDP GSFF HKPIVLNSF  +        +H+P+WK      +NMD TV 
Sbjct: 1   MIRRGGLSMDSDPIGSFFLHKPIVLNSFSAE-----DTNNHNPEWKKLSLHNNNMDATVT 55

Query: 66  KRXXXXXXXXXXXTIPFQVNLS 1
            +           TIPF++NLS
Sbjct: 56  TK---------DYTIPFRINLS 68


>ref|XP_003526336.1| PREDICTED: probable WRKY transcription factor 31-like [Glycine max]
          Length = 628

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 41/81 (50%), Positives = 46/81 (56%), Gaps = 4/81 (4%)
 Frame = -2

Query: 234 MARGGGL-SIDSDPTGSFFHHKPIVLNSFPEDXXXXXXXXSHHPKWK---LGHNMDGTVN 67
           M RGGGL S+DSDP GSFF HKPIVLNSFP +          + KWK   L HNMD T +
Sbjct: 1   MVRGGGLQSMDSDPIGSFFLHKPIVLNSFPAEDT--------NNKWKKLSLHHNMDATAS 52

Query: 66  KRXXXXXXXXXXXTIPFQVNL 4
                        TIPFQV+L
Sbjct: 53  N--------TKDNTIPFQVSL 65


Top