BLASTX nr result

ID: Glycyrrhiza24_contig00021593 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00021593
         (538 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003605934.1| Exosome complex exonuclease RRP6 [Medicago t...   231   4e-59
ref|XP_003526329.1| PREDICTED: uncharacterized protein LOC100791...   139   2e-31
emb|CAN79186.1| hypothetical protein VITISV_035853 [Vitis vinifera]   115   5e-24
emb|CBI28799.3| unnamed protein product [Vitis vinifera]              114   7e-24
ref|XP_002524188.1| 3'-5' exonuclease, putative [Ricinus communi...   106   3e-21

>ref|XP_003605934.1| Exosome complex exonuclease RRP6 [Medicago truncatula]
            gi|355506989|gb|AES88131.1| Exosome complex exonuclease
            RRP6 [Medicago truncatula]
          Length = 974

 Score =  231 bits (590), Expect = 4e-59
 Identities = 122/181 (67%), Positives = 141/181 (77%), Gaps = 2/181 (1%)
 Frame = -2

Query: 537  QVGMSPHERRKFEKKRGFSFRHSTGSTAVLPQQENHADCAPRMSNVDTLNVDALDGSYAN 358
            QVGM+PHERRKFEKKRG S +HSTGS + +P + N  D AP MSN DTL VD LDGSY N
Sbjct: 753  QVGMTPHERRKFEKKRGVSSKHSTGSASAVPYEGNDTDYAPGMSNGDTLKVDTLDGSYVN 812

Query: 357  KETRKVDRELLMEKDDFGKPFLASDLAVEGATSNGNTILVKATDY--NESSNSAVNVDNS 184
            +ETR  D      +DD GKP LASDLAV+ ATSNGNTI+VK TD+  +E+S S V+ D S
Sbjct: 813  EETRSGDN----RQDDSGKPSLASDLAVDKATSNGNTIVVKTTDHDDDETSYSLVDTDES 868

Query: 183  LIRRQPNVVSDISYPPRDEESTQAKHNSKLSLLGHGPHGKQVVEHLLKEYGEDGIGEFCQ 4
            L + QPNVVSD     +DE++TQAKH+SKLSLLGHGPHGKQVV+HLLKEYGEDGI EFCQ
Sbjct: 869  LNKMQPNVVSD-EESIKDEDTTQAKHHSKLSLLGHGPHGKQVVDHLLKEYGEDGIREFCQ 927

Query: 3    R 1
            R
Sbjct: 928  R 928


>ref|XP_003526329.1| PREDICTED: uncharacterized protein LOC100791485 [Glycine max]
          Length = 873

 Score =  139 bits (351), Expect = 2e-31
 Identities = 84/180 (46%), Positives = 104/180 (57%), Gaps = 1/180 (0%)
 Frame = -2

Query: 537  QVGMSPHERRKFEKKRGFSFRHSTGSTAVLPQQENHADCAPRMSNVDTLNVDALDGSYAN 358
            QVGM+PHERR+FEKKRGFSF+HS G+TA + +Q+NH+                ++G+ + 
Sbjct: 710  QVGMTPHERRRFEKKRGFSFKHSIGNTATVQKQDNHS----------------INGTAS- 752

Query: 357  KETRKVDRELLMEKDDFGKPFLASDLAVEGATSNGNTILVKATDYNESSNSAVNVDNS-L 181
                                          ATSN N I V+ TDYNESS+SA+NVD+S L
Sbjct: 753  ------------------------------ATSNRNMITVETTDYNESSDSAINVDDSCL 782

Query: 180  IRRQPNVVSDISYPPRDEESTQAKHNSKLSLLGHGPHGKQVVEHLLKEYGEDGIGEFCQR 1
              RQ N +S+              HNSKLSLLGHGPHGK+VVE+LLKEYGEDGI  FCQR
Sbjct: 783  SSRQENGLSE--------------HNSKLSLLGHGPHGKRVVEYLLKEYGEDGIRAFCQR 828


>emb|CAN79186.1| hypothetical protein VITISV_035853 [Vitis vinifera]
          Length = 951

 Score =  115 bits (287), Expect = 5e-24
 Identities = 71/181 (39%), Positives = 98/181 (54%), Gaps = 3/181 (1%)
 Frame = -2

Query: 534  VGMSPHERRKFEKKRGFSFRHSTGSTAVLPQQENHADCAPRMSNVDTLNVDALDGSYANK 355
            VGMSPHER++ E+K+G S +HS G+     +QE++A         + L VD   G    K
Sbjct: 693  VGMSPHERKRLERKKGMSLKHSKGAGFPNKEQESNARSMGTSPIDNALKVDGEGGLNTTK 752

Query: 354  ETRKVDRELLMEKDDFGKPFLASDLAV--EGATSNGNTILVKATDYNESSNSAV-NVDNS 184
                         +  GK    +DL +  E   S+ N +    ++ +E  +  V + DN 
Sbjct: 753  G------------EACGKQENGNDLEITMEVLASDSNNLSSDRSETSEMKDMCVMDTDNC 800

Query: 183  LIRRQPNVVSDISYPPRDEESTQAKHNSKLSLLGHGPHGKQVVEHLLKEYGEDGIGEFCQ 4
              R Q     D+ YP  +  ++  KHN KLSLLGHGPHGK+VV+HLLKEYGEDGI +FCQ
Sbjct: 801  ESRSQSEGTLDLFYPKSBGNASP-KHNPKLSLLGHGPHGKEVVDHLLKEYGEDGIRQFCQ 859

Query: 3    R 1
            R
Sbjct: 860  R 860


>emb|CBI28799.3| unnamed protein product [Vitis vinifera]
          Length = 935

 Score =  114 bits (286), Expect = 7e-24
 Identities = 71/181 (39%), Positives = 97/181 (53%), Gaps = 3/181 (1%)
 Frame = -2

Query: 534  VGMSPHERRKFEKKRGFSFRHSTGSTAVLPQQENHADCAPRMSNVDTLNVDALDGSYANK 355
            VGMSPHER++ E+K+G S +HS G+     +QE++A         + L VD   G    K
Sbjct: 722  VGMSPHERKRLERKKGMSLKHSKGAGFPNKEQESNARSMGTSPIDNALKVDGEGGLNTTK 781

Query: 354  ETRKVDRELLMEKDDFGKPFLASDLAV--EGATSNGNTILVKATDYNESSNSAV-NVDNS 184
                         +  GK    +DL +  E   S+ N +    ++ +E  +  V + DN 
Sbjct: 782  G------------EACGKQENGNDLEITMEVLASDSNNLSSDRSETSEMKDMCVMDTDNC 829

Query: 183  LIRRQPNVVSDISYPPRDEESTQAKHNSKLSLLGHGPHGKQVVEHLLKEYGEDGIGEFCQ 4
              R Q     D+ YP +   +   KHN KLSLLGHGPHGK+VV+HLLKEYGEDGI +FCQ
Sbjct: 830  ESRSQSEGTLDLFYP-KSNGNASPKHNPKLSLLGHGPHGKEVVDHLLKEYGEDGIRQFCQ 888

Query: 3    R 1
            R
Sbjct: 889  R 889


>ref|XP_002524188.1| 3'-5' exonuclease, putative [Ricinus communis]
            gi|223536557|gb|EEF38203.1| 3'-5' exonuclease, putative
            [Ricinus communis]
          Length = 977

 Score =  106 bits (264), Expect = 3e-21
 Identities = 81/191 (42%), Positives = 100/191 (52%), Gaps = 13/191 (6%)
 Frame = -2

Query: 534  VGMSPHERRKFEKKRGFSFRHSTGSTAVLPQQENHADCAPRMSNVDTLNV-DALDGSYA- 361
            VGMSPHERR+FEKKRG S + S  +  +    E   D     S+V+  ++ D  D S   
Sbjct: 731  VGMSPHERRRFEKKRGLSLKRSANN--ICSNNELVHDVTMVKSSVENNSITDTPDSSQTI 788

Query: 360  NKETRKVDRELLMEKDDFGKPFLASDLAVEGATSNGNTILVKAT---DYNESSNS----- 205
            N E R      + E  DF   F  +D  V G +SN     V A    D N + N      
Sbjct: 789  NSELRTE----VKEDQDF---FKTTDPDV-GVSSNLQVADVSAAAHKDMNSNENEVSDGK 840

Query: 204  ---AVNVDNSLIRRQPNVVSDISYPPRDEESTQAKHNSKLSLLGHGPHGKQVVEHLLKEY 34
               A N  ++     PN +   +YP        +K+NSKLSLLGHGPHGKQVVEHLLKEY
Sbjct: 841  EICAGNDGDTCEINPPNGIVCSNYPTHGGHGL-SKNNSKLSLLGHGPHGKQVVEHLLKEY 899

Query: 33   GEDGIGEFCQR 1
            G+DGI EFCQR
Sbjct: 900  GDDGIREFCQR 910


Top