BLASTX nr result

ID: Glycyrrhiza24_contig00021578 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00021578
         (996 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003600887.1| DNA replication complex GINS protein PSF3 [M...   313   4e-83
gb|AFK34889.1| unknown [Medicago truncatula]                          311   2e-82
ref|XP_003552381.1| PREDICTED: DNA replication complex GINS prot...   309   6e-82
ref|XP_003538465.1| PREDICTED: DNA replication complex GINS prot...   304   2e-80
gb|ACU18990.1| unknown [Glycine max]                                  304   2e-80

>ref|XP_003600887.1| DNA replication complex GINS protein PSF3 [Medicago truncatula]
           gi|355489935|gb|AES71138.1| DNA replication complex GINS
           protein PSF3 [Medicago truncatula]
          Length = 186

 Score =  313 bits (802), Expect = 4e-83
 Identities = 160/186 (86%), Positives = 163/186 (87%), Gaps = 1/186 (0%)
 Frame = +3

Query: 216 MAKYYXXXXXXXXXXXXXXXFQKAASGVGI-DPSSETDFIEAGSKVELPFWLAHELQLRQ 392
           MA YY               FQKAASGVGI DPSSETDFIEAGSKVELPFWLAHELQLRQ
Sbjct: 1   MANYYDMDDILVEEEIVSVIFQKAASGVGIIDPSSETDFIEAGSKVELPFWLAHELQLRQ 60

Query: 393 AVSVNVPPCFNQKTRLEIQADSASVDLRSRCPFFYEFGCKIAPIVGDRTIGFLLLSAFKS 572
           AVSVNVPPCFNQKTRLEIQAD A VDLRSRCP+FYEFGCKIAPIVGDRTIGFLLLSAFK+
Sbjct: 61  AVSVNVPPCFNQKTRLEIQADCACVDLRSRCPYFYEFGCKIAPIVGDRTIGFLLLSAFKN 120

Query: 573 RYKEVLTKAHTLAFAAGSKFWTILTKEEIHLYETAQSAMASFKKWRMGGPRFQIASILGR 752
           RYKEVLTKAHT A AAGSKFWTILT EEI+LYETAQSAMASFKKWRMGGPRFQIASILGR
Sbjct: 121 RYKEVLTKAHTAAIAAGSKFWTILTNEEINLYETAQSAMASFKKWRMGGPRFQIASILGR 180

Query: 753 KRKSTE 770
           KRK TE
Sbjct: 181 KRKPTE 186


>gb|AFK34889.1| unknown [Medicago truncatula]
          Length = 186

 Score =  311 bits (797), Expect = 2e-82
 Identities = 159/186 (85%), Positives = 162/186 (87%), Gaps = 1/186 (0%)
 Frame = +3

Query: 216 MAKYYXXXXXXXXXXXXXXXFQKAASGVGI-DPSSETDFIEAGSKVELPFWLAHELQLRQ 392
           MA YY               FQKAASGVGI DPSSETDFIEAGSKVELPFWLAHELQLRQ
Sbjct: 1   MANYYDMDDILVEEEIVSVIFQKAASGVGIIDPSSETDFIEAGSKVELPFWLAHELQLRQ 60

Query: 393 AVSVNVPPCFNQKTRLEIQADSASVDLRSRCPFFYEFGCKIAPIVGDRTIGFLLLSAFKS 572
           AVSVNVPPCFNQK RLEIQAD A VDLRSRCP+FYEFGCKIAPIVGDRTIGFLLLSAFK+
Sbjct: 61  AVSVNVPPCFNQKARLEIQADCACVDLRSRCPYFYEFGCKIAPIVGDRTIGFLLLSAFKN 120

Query: 573 RYKEVLTKAHTLAFAAGSKFWTILTKEEIHLYETAQSAMASFKKWRMGGPRFQIASILGR 752
           RYKEVLTKAHT A AAGSKFWTILT EEI+LYETAQSAMASFKKWRMGGPRFQIASILGR
Sbjct: 121 RYKEVLTKAHTAAIAAGSKFWTILTNEEINLYETAQSAMASFKKWRMGGPRFQIASILGR 180

Query: 753 KRKSTE 770
           KRK TE
Sbjct: 181 KRKPTE 186


>ref|XP_003552381.1| PREDICTED: DNA replication complex GINS protein PSF3-like [Glycine
           max]
          Length = 184

 Score =  309 bits (792), Expect = 6e-82
 Identities = 156/185 (84%), Positives = 162/185 (87%)
 Frame = +3

Query: 216 MAKYYXXXXXXXXXXXXXXXFQKAASGVGIDPSSETDFIEAGSKVELPFWLAHELQLRQA 395
           MAKYY               FQKAASGVGIDPSS   FIE GSKVELPFWLAHELQLRQA
Sbjct: 1   MAKYYDIDDIIVEEETVSVIFQKAASGVGIDPSSSI-FIETGSKVELPFWLAHELQLRQA 59

Query: 396 VSVNVPPCFNQKTRLEIQADSASVDLRSRCPFFYEFGCKIAPIVGDRTIGFLLLSAFKSR 575
           VSVNVPPCFNQKTR E+ ADSA VDLRSRCPFFYEFGCKIAPIVGDRTIGFLLLSAFKSR
Sbjct: 60  VSVNVPPCFNQKTRQELHADSAGVDLRSRCPFFYEFGCKIAPIVGDRTIGFLLLSAFKSR 119

Query: 576 YKEVLTKAHTLAFAAGSKFWTILTKEEIHLYETAQSAMASFKKWRMGGPRFQIASILGRK 755
           YKE+LTKAH++AFAAGSKFWTILTKEEI+LYETAQSAMASFKKWRMGGPRFQIAS+LGRK
Sbjct: 120 YKEILTKAHSVAFAAGSKFWTILTKEEIYLYETAQSAMASFKKWRMGGPRFQIASVLGRK 179

Query: 756 RKSTE 770
           RKS E
Sbjct: 180 RKSKE 184


>ref|XP_003538465.1| PREDICTED: DNA replication complex GINS protein PSF3-like isoform 1
           [Glycine max] gi|356539971|ref|XP_003538466.1|
           PREDICTED: DNA replication complex GINS protein
           PSF3-like isoform 2 [Glycine max]
          Length = 184

 Score =  304 bits (779), Expect = 2e-80
 Identities = 153/185 (82%), Positives = 160/185 (86%)
 Frame = +3

Query: 216 MAKYYXXXXXXXXXXXXXXXFQKAASGVGIDPSSETDFIEAGSKVELPFWLAHELQLRQA 395
           MAKYY               FQ+AASGVGIDPSS    IE GSKVELPFWLAHELQLRQA
Sbjct: 1   MAKYYDIDDIIIEEETVSVIFQRAASGVGIDPSSSI-LIETGSKVELPFWLAHELQLRQA 59

Query: 396 VSVNVPPCFNQKTRLEIQADSASVDLRSRCPFFYEFGCKIAPIVGDRTIGFLLLSAFKSR 575
           VSVNVPPCFNQKTR E+ ADSA VDLRSRCPFFYEFGCKIAPIVGDRTIGFLLL+AFKSR
Sbjct: 60  VSVNVPPCFNQKTRQELHADSAGVDLRSRCPFFYEFGCKIAPIVGDRTIGFLLLTAFKSR 119

Query: 576 YKEVLTKAHTLAFAAGSKFWTILTKEEIHLYETAQSAMASFKKWRMGGPRFQIASILGRK 755
           YKE+LTKAHT+AFA GSKFWTILTKEEI+LYETAQSAMASFKKWRMGGPRFQIAS+LGRK
Sbjct: 120 YKEILTKAHTVAFAPGSKFWTILTKEEIYLYETAQSAMASFKKWRMGGPRFQIASVLGRK 179

Query: 756 RKSTE 770
           RKS E
Sbjct: 180 RKSKE 184


>gb|ACU18990.1| unknown [Glycine max]
          Length = 184

 Score =  304 bits (779), Expect = 2e-80
 Identities = 153/185 (82%), Positives = 160/185 (86%)
 Frame = +3

Query: 216 MAKYYXXXXXXXXXXXXXXXFQKAASGVGIDPSSETDFIEAGSKVELPFWLAHELQLRQA 395
           MAKYY               FQ+AASGVGIDPSS   FIE GSKVELPFWLAHELQLRQA
Sbjct: 1   MAKYYDIDDIIIEEETVSVIFQRAASGVGIDPSSSI-FIETGSKVELPFWLAHELQLRQA 59

Query: 396 VSVNVPPCFNQKTRLEIQADSASVDLRSRCPFFYEFGCKIAPIVGDRTIGFLLLSAFKSR 575
           VSVNVPPCFNQKTR E+ ADSA VDLRSRCPFFYEFGCKIAPIVGDRTIGFLLL+AFKSR
Sbjct: 60  VSVNVPPCFNQKTRQELHADSAGVDLRSRCPFFYEFGCKIAPIVGDRTIGFLLLTAFKSR 119

Query: 576 YKEVLTKAHTLAFAAGSKFWTILTKEEIHLYETAQSAMASFKKWRMGGPRFQIASILGRK 755
           YKE+LTKAHT+AFA GSKFWTILTKEEI+LYETAQSAMASFKKWRMGGPRFQIAS+LGRK
Sbjct: 120 YKEILTKAHTVAFAPGSKFWTILTKEEIYLYETAQSAMASFKKWRMGGPRFQIASVLGRK 179

Query: 756 RKSTE 770
           RK  E
Sbjct: 180 RKFKE 184


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