BLASTX nr result

ID: Glycyrrhiza24_contig00021574 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00021574
         (1002 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003606020.1| F-box family protein [Medicago truncatula] g...   239   1e-60
ref|XP_003608305.1| F-box/LRR-repeat protein [Medicago truncatul...   233   4e-59
ref|XP_003608221.1| F-box/LRR-repeat protein [Medicago truncatul...   224   3e-56
ref|XP_003602875.1| FBD-associated F-box protein [Medicago trunc...   221   2e-55
ref|XP_003606071.1| F-box family protein [Medicago truncatula] g...   212   1e-52

>ref|XP_003606020.1| F-box family protein [Medicago truncatula]
            gi|357476013|ref|XP_003608292.1| F-box family protein
            [Medicago truncatula] gi|355507075|gb|AES88217.1| F-box
            family protein [Medicago truncatula]
            gi|355509347|gb|AES90489.1| F-box family protein
            [Medicago truncatula]
          Length = 489

 Score =  239 bits (609), Expect = 1e-60
 Identities = 133/211 (63%), Positives = 158/211 (74%), Gaps = 1/211 (0%)
 Frame = -1

Query: 1002 EPFSAFIRLNSLILHCCTVRDAQTLCISSATLVNLTMHNNSSEFSKIELSAPSLFTFAII 823
            EPFS F +LNSL++  CTV+DAQ LCI S TLVNLTM N+SS+  KIELSAPSL TFA  
Sbjct: 201  EPFSGFNKLNSLVIDNCTVKDAQILCILSETLVNLTMRNHSSDVYKIELSAPSLSTFAFT 260

Query: 822  GTPYQKLCGSHLSSVTQVSIDAEMWSNYPKFPLVLLSWLQELAGIKSLTVTTTTLQILDM 643
            GTPYQKLCGS+LSSV QV+IDAEM SNY + PLVLLSWL ELA IKSLTV+ +TLQ+L +
Sbjct: 261  GTPYQKLCGSNLSSVKQVNIDAEMLSNYTEPPLVLLSWLLELANIKSLTVSASTLQVLSL 320

Query: 642  VPDLLEVKLPSMCYLKSLKVKPEPLSDMFATILRDIKLKQAVAKSRKEAAKLRKAFKAGW 463
            +PDLL+ KL S+C LKSL+V+ +PLS   +  LR               AKL+K  KAG 
Sbjct: 321  IPDLLKDKLTSLCNLKSLRVQLKPLSYGLSMTLR--------------TAKLQKEVKAGQ 366

Query: 462  -PSSPIPDGILGFLLQNSQSAEVDIMDFSSY 373
             PSSPIPDGI+ FL+QNS SAEVDI+D S +
Sbjct: 367  EPSSPIPDGIVDFLIQNSPSAEVDIIDSSRF 397


>ref|XP_003608305.1| F-box/LRR-repeat protein [Medicago truncatula]
            gi|355509360|gb|AES90502.1| F-box/LRR-repeat protein
            [Medicago truncatula]
          Length = 482

 Score =  233 bits (595), Expect = 4e-59
 Identities = 126/206 (61%), Positives = 153/206 (74%), Gaps = 2/206 (0%)
 Frame = -1

Query: 1002 EPFSAFIRLNSLILHCCTVRDAQTLCISSATLVNLTMHNNSSEFSKIELSAPSLFTFAII 823
            EPF AF +L SL++  C VRDAQ L ISS TLVN  M N S +F+KIEL APSL TF   
Sbjct: 210  EPFLAFPKLTSLVIRSCRVRDAQILRISSETLVNFKMRNYSEDFAKIELCAPSLCTFTFT 269

Query: 822  GTPYQKLCGSHLSSVTQVSIDAEMWSNYPKFPLVLLSWLQELAGIKSLTVTTTTLQILDM 643
            GTP QK+CGS LSSV QV I AEM+S + + PL+L  WL  LA +KSL V++TTL+IL +
Sbjct: 270  GTPVQKICGSGLSSVKQVKIKAEMFSRWDEPPLILFDWLLNLANVKSLMVSSTTLRILSL 329

Query: 642  VPDLLEVKLPSMCYLKSLKVKPEPLSDMFA--TILRDIKLKQAVAKSRKEAAKLRKAFKA 469
            VPDLLEVKLPS+C LKS+++K E  S+  A   ++++  LK+A AKSRKEAAKLRKAFKA
Sbjct: 330  VPDLLEVKLPSLCNLKSMEIKLETCSNQMALPNLVKEAMLKKAAAKSRKEAAKLRKAFKA 389

Query: 468  GWPSSPIPDGILGFLLQNSQSAEVDI 391
                 PIPDGI+ FL QNSQSAEV+I
Sbjct: 390  RLEPPPIPDGIVEFLRQNSQSAEVNI 415


>ref|XP_003608221.1| F-box/LRR-repeat protein [Medicago truncatula]
            gi|355509276|gb|AES90418.1| F-box/LRR-repeat protein
            [Medicago truncatula]
          Length = 597

 Score =  224 bits (570), Expect = 3e-56
 Identities = 119/198 (60%), Positives = 151/198 (76%), Gaps = 1/198 (0%)
 Frame = -1

Query: 1002 EPFSAFIRLNSLILHCCTVRDAQTLCISSATLVNLTMHNNSSEFSKIELSAPSLFTFAII 823
            +PFSAF +LNSL+L+ C + DAQ L ISS TLV+L MH+NSS FS+IELS PSL TF I 
Sbjct: 334  DPFSAFTKLNSLVLYGCKIEDAQILKISSETLVDLAMHHNSSNFSQIELSTPSLCTFTIT 393

Query: 822  GTPYQKLCGSHLSSVTQVSIDAEMWSNYPKFPLVLLSWLQELAGIKSLTVTTTTLQILDM 643
            G P QK+CGS LSSV QV+IDA+M SN+ + P+VLLSWL +LA +KSL V++ TLQIL +
Sbjct: 394  GIPNQKICGSGLSSVKQVNIDAKMHSNFEESPMVLLSWLLDLANVKSLIVSSITLQILSL 453

Query: 642  VPDLLEVKLPSMCYLKSLKVKPEPL-SDMFATILRDIKLKQAVAKSRKEAAKLRKAFKAG 466
            VPD+LEV+L S+C LKS+++K EPL + +    + +  LK+  AKS KEA KL+KAFKAG
Sbjct: 454  VPDILEVELHSLCNLKSMEIKLEPLQTQLGLPRVVNAMLKKVAAKSSKEATKLQKAFKAG 513

Query: 465  WPSSPIPDGILGFLLQNS 412
                PIPDGI+ FL QNS
Sbjct: 514  LEPPPIPDGIVDFLRQNS 531


>ref|XP_003602875.1| FBD-associated F-box protein [Medicago truncatula]
            gi|355491923|gb|AES73126.1| FBD-associated F-box protein
            [Medicago truncatula]
          Length = 403

 Score =  221 bits (564), Expect = 2e-55
 Identities = 124/207 (59%), Positives = 155/207 (74%), Gaps = 1/207 (0%)
 Frame = -1

Query: 1002 EPFSAFIRLNSLILHCCTVRDAQTLCISSATLVNLTMHNNSSEFSKIELSAPSLFTFAII 823
            EPFS F RLNSL+L+ C ++DA TLCISSATLVN T+ + S ++ KIEL AP L TFA I
Sbjct: 198  EPFSTFKRLNSLVLYNCALKDAVTLCISSATLVNFTVRSYSYDYYKIELCAPCLGTFAFI 257

Query: 822  GTPYQKLCGSHLSSVTQVSIDAEMWSNYPKFPLVLLSWLQELAGIKSLTVTTTTLQILDM 643
            G P+QKL GS LS V  V IDAE+ S   + PL LL+WL +L   KSLTVT +TLQ+L +
Sbjct: 258  GKPFQKLSGSSLSYVKHVDIDAEILSMEMEPPLFLLNWLFKLTNTKSLTVTASTLQVLSL 317

Query: 642  VPDLLEVKLPSMCYLKSLKVKPEPLSDMFATILRDIKLKQAVAKSRKEAAKLRKAFKAGW 463
              D+L++KLPS+  LKSLKVK EPL+  F  +L + KL++   KSRKEAAKLRK+FKAG 
Sbjct: 318  NSDVLKIKLPSLGNLKSLKVKREPLAYRFRKMLMEAKLQE--IKSRKEAAKLRKSFKAGL 375

Query: 462  -PSSPIPDGILGFLLQNSQSAEVDIMD 385
             PS+PIPDGI+ FLLQNS SA+V ++D
Sbjct: 376  EPSAPIPDGIINFLLQNSPSAQVYMVD 402


>ref|XP_003606071.1| F-box family protein [Medicago truncatula]
           gi|355507126|gb|AES88268.1| F-box family protein
           [Medicago truncatula]
          Length = 428

 Score =  212 bits (540), Expect = 1e-52
 Identities = 113/203 (55%), Positives = 144/203 (70%)
 Frame = -1

Query: 999 PFSAFIRLNSLILHCCTVRDAQTLCISSATLVNLTMHNNSSEFSKIELSAPSLFTFAIIG 820
           PFS F +L SLI+H CTV D Q + ISS TLVN  M  +S + +KIELS PSL TF   G
Sbjct: 225 PFSGFAKLKSLIIHGCTVMDTQIITISSETLVNFAMLYSSPKIAKIELSTPSLCTFTFYG 284

Query: 819 TPYQKLCGSHLSSVTQVSIDAEMWSNYPKFPLVLLSWLQELAGIKSLTVTTTTLQILDMV 640
            P+ K+C S+LSSV +V I A M ++  K P+VL +WLQEL  +KSL V++ TLQIL +V
Sbjct: 285 IPHPKICRSNLSSVKEVKIYARMDTSLEKLPMVLFNWLQELLAVKSLKVSSITLQILSLV 344

Query: 639 PDLLEVKLPSMCYLKSLKVKPEPLSDMFATILRDIKLKQAVAKSRKEAAKLRKAFKAGWP 460
           PDLLEVKLPS+C LK +++K +PLS   + IL+D  L +A AKS +EAA LRK F AG  
Sbjct: 345 PDLLEVKLPSLCNLKLVEIKMQPLSFALSCILKDAMLMKAAAKSPEEAADLRKTFGAGLE 404

Query: 459 SSPIPDGILGFLLQNSQSAEVDI 391
              IPDGI+ FLLQNS +A+V+I
Sbjct: 405 PPSIPDGIVDFLLQNSSTAKVNI 427


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