BLASTX nr result

ID: Glycyrrhiza24_contig00021573 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00021573
         (285 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003627563.1| ATP-dependent helicase BRM [Medicago truncat...   184   5e-45
ref|XP_003548671.1| PREDICTED: ATP-dependent helicase BRM-like [...   183   1e-44
ref|XP_003528847.1| PREDICTED: ATP-dependent helicase BRM-like [...   183   1e-44
ref|XP_002276245.2| PREDICTED: ATP-dependent helicase BRM-like [...   182   3e-44
ref|XP_003552402.1| PREDICTED: ATP-dependent helicase BRM-like [...   182   3e-44

>ref|XP_003627563.1| ATP-dependent helicase BRM [Medicago truncatula]
            gi|355521585|gb|AET02039.1| ATP-dependent helicase BRM
            [Medicago truncatula]
          Length = 2175

 Score =  184 bits (468), Expect = 5e-45
 Identities = 88/94 (93%), Positives = 90/94 (95%)
 Frame = -2

Query: 284  VFDNRKAFHDWFSKPFQKEGPTQNAEDDWLETEKKVIIIHRLHQILEPFMLRRRVEDVEG 105
            VFDN+KAFHDWFSKPFQKEG TQNAEDDWLETEKKVI IHRLHQILEPFMLRRRVEDVEG
Sbjct: 1145 VFDNKKAFHDWFSKPFQKEGATQNAEDDWLETEKKVITIHRLHQILEPFMLRRRVEDVEG 1204

Query: 104  SLPAKDSIVLKCKMSPVQSAIYDWVKSTGTLRLD 3
            SLP KDSIVL+CKMS VQSAIYDWVKSTGTLRLD
Sbjct: 1205 SLPPKDSIVLRCKMSSVQSAIYDWVKSTGTLRLD 1238


>ref|XP_003548671.1| PREDICTED: ATP-dependent helicase BRM-like [Glycine max]
          Length = 2229

 Score =  183 bits (464), Expect = 1e-44
 Identities = 88/94 (93%), Positives = 90/94 (95%)
 Frame = -2

Query: 284  VFDNRKAFHDWFSKPFQKEGPTQNAEDDWLETEKKVIIIHRLHQILEPFMLRRRVEDVEG 105
            VFDN+KAF+DWFSKPFQKEGPTQN EDDWLETEKKVIIIHRLHQILEPFMLRRRVEDVEG
Sbjct: 1182 VFDNKKAFNDWFSKPFQKEGPTQNVEDDWLETEKKVIIIHRLHQILEPFMLRRRVEDVEG 1241

Query: 104  SLPAKDSIVLKCKMSPVQSAIYDWVKSTGTLRLD 3
            SLP K SIVLKCKMS VQSAIYDWVKSTGTLRLD
Sbjct: 1242 SLPPKVSIVLKCKMSAVQSAIYDWVKSTGTLRLD 1275


>ref|XP_003528847.1| PREDICTED: ATP-dependent helicase BRM-like [Glycine max]
          Length = 2226

 Score =  183 bits (464), Expect = 1e-44
 Identities = 88/94 (93%), Positives = 90/94 (95%)
 Frame = -2

Query: 284  VFDNRKAFHDWFSKPFQKEGPTQNAEDDWLETEKKVIIIHRLHQILEPFMLRRRVEDVEG 105
            VFDN+KAF+DWFSKPFQKEGPTQN EDDWLETEKKVIIIHRLHQILEPFMLRRRVEDVEG
Sbjct: 1180 VFDNKKAFNDWFSKPFQKEGPTQNVEDDWLETEKKVIIIHRLHQILEPFMLRRRVEDVEG 1239

Query: 104  SLPAKDSIVLKCKMSPVQSAIYDWVKSTGTLRLD 3
            SLP K SIVLKCKMS VQSAIYDWVKSTGTLRLD
Sbjct: 1240 SLPPKVSIVLKCKMSAVQSAIYDWVKSTGTLRLD 1273


>ref|XP_002276245.2| PREDICTED: ATP-dependent helicase BRM-like [Vitis vinifera]
          Length = 2263

 Score =  182 bits (461), Expect = 3e-44
 Identities = 85/94 (90%), Positives = 89/94 (94%)
 Frame = -2

Query: 284  VFDNRKAFHDWFSKPFQKEGPTQNAEDDWLETEKKVIIIHRLHQILEPFMLRRRVEDVEG 105
            VFDNRKAFHDWFSKPFQKEGPT NAEDDWLETEKKVIIIHRLHQILEPFMLRRRVEDVEG
Sbjct: 1191 VFDNRKAFHDWFSKPFQKEGPTHNAEDDWLETEKKVIIIHRLHQILEPFMLRRRVEDVEG 1250

Query: 104  SLPAKDSIVLKCKMSPVQSAIYDWVKSTGTLRLD 3
            SLP K SIVL+CKMS +Q AIYDW+KSTGTLR+D
Sbjct: 1251 SLPPKVSIVLRCKMSAIQGAIYDWIKSTGTLRVD 1284


>ref|XP_003552402.1| PREDICTED: ATP-dependent helicase BRM-like [Glycine max]
          Length = 2222

 Score =  182 bits (461), Expect = 3e-44
 Identities = 87/94 (92%), Positives = 90/94 (95%)
 Frame = -2

Query: 284  VFDNRKAFHDWFSKPFQKEGPTQNAEDDWLETEKKVIIIHRLHQILEPFMLRRRVEDVEG 105
            VFDN+KAF+DWFSKPFQKEGPTQN EDDWLETEKKVIIIHRLHQILEPFMLRRRVEDVEG
Sbjct: 1175 VFDNKKAFNDWFSKPFQKEGPTQNTEDDWLETEKKVIIIHRLHQILEPFMLRRRVEDVEG 1234

Query: 104  SLPAKDSIVLKCKMSPVQSAIYDWVKSTGTLRLD 3
            SLP K SIVL+CKMS VQSAIYDWVKSTGTLRLD
Sbjct: 1235 SLPPKVSIVLRCKMSAVQSAIYDWVKSTGTLRLD 1268


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