BLASTX nr result

ID: Glycyrrhiza24_contig00021572 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00021572
         (342 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517349.1| DNA binding protein, putative [Ricinus commu...   111   7e-23
ref|XP_002324010.1| predicted protein [Populus trichocarpa] gi|2...    95   7e-18
ref|XP_002274643.2| PREDICTED: methyl-CpG-binding domain-contain...    94   9e-18
ref|XP_004167238.1| PREDICTED: LOW QUALITY PROTEIN: methyl-CpG-b...    87   1e-15
ref|XP_004141185.1| PREDICTED: methyl-CpG-binding domain-contain...    86   2e-15

>ref|XP_002517349.1| DNA binding protein, putative [Ricinus communis]
            gi|223543360|gb|EEF44891.1| DNA binding protein, putative
            [Ricinus communis]
          Length = 2145

 Score =  111 bits (277), Expect = 7e-23
 Identities = 56/113 (49%), Positives = 74/113 (65%)
 Frame = +2

Query: 2    RDSIMLGPKSRLQEFINAQSEGQVEDQGPISMPRNREKTVSNSLVTKATSLLEKKYGPFF 181
            ++SIM   K R QE    +   Q E +  +S  RN ++T  ++ +TKAT LLEK YG F 
Sbjct: 1666 KESIMQWLKLRFQESQRIRDPVQEECRAGLSTIRNNDQTAFSNCLTKATLLLEKNYGAFV 1725

Query: 182  EWDTVEVLKKQSRKTRSTNDEKLYRCECLEPILPSRKHCMYCHKTVLSDVEFE 340
            E DT ++LKK+ +K R TN+EK YRC+CLE I PSR HC  CH+T  +DVEFE
Sbjct: 1726 ELDTSDMLKKRGKKARGTNEEKTYRCDCLELIWPSRNHCYSCHRTSSNDVEFE 1778


>ref|XP_002324010.1| predicted protein [Populus trichocarpa] gi|222867012|gb|EEF04143.1|
           predicted protein [Populus trichocarpa]
          Length = 468

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 51/112 (45%), Positives = 65/112 (58%)
 Frame = +2

Query: 2   RDSIMLGPKSRLQEFINAQSEGQVEDQGPISMPRNREKTVSNSLVTKATSLLEKKYGPFF 181
           ++SI    K R QE   A+   Q E Q    +  N     +N LVTKA   LEKKYGP  
Sbjct: 322 KESISQCLKQRFQETRQARDLVQEEHQALSVITNNNNTAFANYLVTKAAMFLEKKYGPLV 381

Query: 182 EWDTVEVLKKQSRKTRSTNDEKLYRCECLEPILPSRKHCMYCHKTVLSDVEF 337
           E  T + L K++R T    + K+YRC+CLEPILPSR HC+ CH+T   D+EF
Sbjct: 382 ELHTSDKLVKRARVT---GEGKMYRCDCLEPILPSRHHCLSCHRTFSDDIEF 430


>ref|XP_002274643.2| PREDICTED: methyl-CpG-binding domain-containing protein 9-like [Vitis
            vinifera]
          Length = 2164

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 47/113 (41%), Positives = 69/113 (61%)
 Frame = +2

Query: 2    RDSIMLGPKSRLQEFINAQSEGQVEDQGPISMPRNREKTVSNSLVTKATSLLEKKYGPFF 181
            ++SI+   K R +++       QV+ Q  +S   N E   S+ L+TKA  LL KKYGP+F
Sbjct: 1696 KESILHLHKLRFRDWKLTGDPDQVDSQTTLSRFPNSENAFSDGLLTKAGILLGKKYGPWF 1755

Query: 182  EWDTVEVLKKQSRKTRSTNDEKLYRCECLEPILPSRKHCMYCHKTVLSDVEFE 340
            E +  +  KK   +++ TN+ K+YRCECLEPI  SR HC  CH+T  +D++ E
Sbjct: 1756 EPEIADSSKKWDLRSKVTNESKMYRCECLEPIWSSRHHCPSCHRTFFTDIQLE 1808


>ref|XP_004167238.1| PREDICTED: LOW QUALITY PROTEIN: methyl-CpG-binding domain-containing
            protein 9-like [Cucumis sativus]
          Length = 1277

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 46/114 (40%), Positives = 67/114 (58%), Gaps = 1/114 (0%)
 Frame = +2

Query: 2    RDSIMLGPKSRLQEFINAQSEGQVEDQGPISMPRNREKT-VSNSLVTKATSLLEKKYGPF 178
            ++SI+   K +LQ    + ++   E     S   + EK   S  LV +A++LLE KYGPF
Sbjct: 799  KESILQWLKPKLQTSSRSNNQSPEEQLKDSSSSSDVEKLECSGFLVNRASALLESKYGPF 858

Query: 179  FEWDTVEVLKKQSRKTRSTNDEKLYRCECLEPILPSRKHCMYCHKTVLSDVEFE 340
             E+ T + L +   K R   DEK++RC C+EP+ PSR HC+ CHK+  +DVE E
Sbjct: 859  LEFVTPDDLNRWLDKARLAEDEKMFRCVCMEPVWPSRYHCLSCHKSFSTDVELE 912


>ref|XP_004141185.1| PREDICTED: methyl-CpG-binding domain-containing protein 9-like
            [Cucumis sativus]
          Length = 2131

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 45/114 (39%), Positives = 67/114 (58%), Gaps = 1/114 (0%)
 Frame = +2

Query: 2    RDSIMLGPKSRLQEFINAQSEGQVEDQGPISMPRNREKT-VSNSLVTKATSLLEKKYGPF 178
            ++SI+   K +LQ    + ++   E     S   + EK   S  LV +A++LLE KYGPF
Sbjct: 1653 KESILQWLKPKLQTSSRSNNQSPEEQLKDSSSSSDVEKLECSGFLVNRASALLESKYGPF 1712

Query: 179  FEWDTVEVLKKQSRKTRSTNDEKLYRCECLEPILPSRKHCMYCHKTVLSDVEFE 340
             E+ T + L +   K R   DEK++RC C+EP+ PSR HC+ CH++  +DVE E
Sbjct: 1713 LEFVTPDDLNRWLDKARLAEDEKMFRCVCMEPVWPSRYHCLSCHRSFSTDVELE 1766


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