BLASTX nr result

ID: Glycyrrhiza24_contig00021564 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00021564
         (246 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003589591.1| Replication factor C large subunit [Medicago...   107   8e-22
ref|XP_003601043.1| ATPase family AAA domain-containing protein ...    86   4e-15
ref|XP_003522579.1| PREDICTED: uncharacterized protein LOC100784...    59   5e-07
ref|XP_003527935.1| PREDICTED: uncharacterized protein LOC100784...    58   9e-07

>ref|XP_003589591.1| Replication factor C large subunit [Medicago truncatula]
            gi|355478639|gb|AES59842.1| Replication factor C large
            subunit [Medicago truncatula]
          Length = 1178

 Score =  107 bits (268), Expect = 8e-22
 Identities = 56/80 (70%), Positives = 66/80 (82%)
 Frame = -1

Query: 243  GSKLGCENRVDITSEMLASTTNIMALGKLSRQDHNKCLSNYNKKLLEANNPRNDKKSMQC 64
            G KLG E+RVDITSEMLAST NIMALGKLSRQDH K  S+Y K+LLE N+ RND KS++C
Sbjct: 1018 GPKLGFEDRVDITSEMLASTANIMALGKLSRQDHTKTTSSYTKELLEVNDQRND-KSLRC 1076

Query: 63   HENRTSPFDVVRYIVPVRLS 4
            +E+RTS F+V+R IVP R S
Sbjct: 1077 NESRTSLFNVIRSIVPARSS 1096


>ref|XP_003601043.1| ATPase family AAA domain-containing protein [Medicago truncatula]
            gi|355490091|gb|AES71294.1| ATPase family AAA
            domain-containing protein [Medicago truncatula]
          Length = 1283

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 47/82 (57%), Positives = 56/82 (68%)
 Frame = -1

Query: 246  VGSKLGCENRVDITSEMLASTTNIMALGKLSRQDHNKCLSNYNKKLLEANNPRNDKKSMQ 67
            VGS LGC N++D+TSEMLASTTN MALGKLS  D  K    Y  K LE NNP N+ K   
Sbjct: 1122 VGSTLGCANKIDLTSEMLASTTNSMALGKLSGLDLAKSTGIYTGKELELNNPTNNMKK-- 1179

Query: 66   CHENRTSPFDVVRYIVPVRLSM 1
              EN+ S F+VV+ IVP R+S+
Sbjct: 1180 -SENKASLFEVVQSIVPARISL 1200


>ref|XP_003522579.1| PREDICTED: uncharacterized protein LOC100784209 [Glycine max]
          Length = 1199

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 39/80 (48%), Positives = 46/80 (57%)
 Frame = -1

Query: 240  SKLGCENRVDITSEMLASTTNIMALGKLSRQDHNKCLSNYNKKLLEANNPRNDKKSMQCH 61
            SKLGC N VDITSEMLAS        KLS QD  K    Y  K +E  +P N   S Q  
Sbjct: 1056 SKLGCANCVDITSEMLASAI------KLSGQDLTKSKVIYTGKEVEWKSPIN---STQKS 1106

Query: 60   ENRTSPFDVVRYIVPVRLSM 1
            EN+TS F  ++ IVP R+S+
Sbjct: 1107 ENKTSQFKAIQSIVPARISL 1126


>ref|XP_003527935.1| PREDICTED: uncharacterized protein LOC100784968 [Glycine max]
          Length = 1197

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 37/78 (47%), Positives = 47/78 (60%)
 Frame = -1

Query: 240  SKLGCENRVDITSEMLASTTNIMALGKLSRQDHNKCLSNYNKKLLEANNPRNDKKSMQCH 61
            SKLGC N VDITSEMLAST       KL+ QD  +    Y  K +E N+P N   + Q  
Sbjct: 1060 SKLGCANCVDITSEMLASTI------KLTGQDLARSKVIYTGKQVEWNSPIN---NTQKS 1110

Query: 60   ENRTSPFDVVRYIVPVRL 7
            EN+TS F+ ++ IVP R+
Sbjct: 1111 ENKTSQFEAIQSIVPARI 1128


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