BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00021560
         (698 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003534039.1| PREDICTED: cleavage and polyadenylation spec...   337   1e-90
ref|XP_003548242.1| PREDICTED: cleavage and polyadenylation spec...   336   2e-90
emb|CBI24510.3| unnamed protein product [Vitis vinifera]              321   1e-85
ref|XP_002268371.1| PREDICTED: cleavage and polyadenylation spec...   321   1e-85
ref|XP_002510905.1| cleavage and polyadenylation specificity fac...   315   4e-84

>ref|XP_003534039.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            1-like [Glycine max]
          Length = 1449

 Score =  337 bits (864), Expect = 1e-90
 Identities = 166/178 (93%), Positives = 173/178 (97%)
 Frame = +2

Query: 2    LSLLVSDDQKNIQIFYYAPKMSESWKGQKLLSRAEFHVGAHVTKFLRLQMLSTSERAGSG 181
            LSL+VSDD +NIQIFYYAPKMSESWKGQKLLSRAEFHVGAHVTKFLRLQMLSTS+RAGS 
Sbjct: 1272 LSLMVSDDNRNIQIFYYAPKMSESWKGQKLLSRAEFHVGAHVTKFLRLQMLSTSDRAGSV 1331

Query: 182  PGSDKTNRFALLFGTLDGSIGCIAPLDEITFRRLQSLQRKLADAVPHVAGLNPKAFRQFR 361
            PGSDKTNRFALLFGTLDGSIGCIAPLDEITFRRLQSLQRKL DAVPHVAGLNP+AFR FR
Sbjct: 1332 PGSDKTNRFALLFGTLDGSIGCIAPLDEITFRRLQSLQRKLVDAVPHVAGLNPRAFRLFR 1391

Query: 362  SNGKAHRPGPDSIVDCELLCHYEMLPLEEQLEIAQQVGTTRSQVLTNLSDLSLGTSFL 535
            SNGKAHRPGPDSIVDCELLCHYEMLPLEEQLEIA Q+GTTRSQ+L+NLSDLSLGTSFL
Sbjct: 1392 SNGKAHRPGPDSIVDCELLCHYEMLPLEEQLEIANQIGTTRSQILSNLSDLSLGTSFL 1449


>ref|XP_003548242.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            1-like [Glycine max]
          Length = 1447

 Score =  336 bits (862), Expect = 2e-90
 Identities = 166/178 (93%), Positives = 173/178 (97%)
 Frame = +2

Query: 2    LSLLVSDDQKNIQIFYYAPKMSESWKGQKLLSRAEFHVGAHVTKFLRLQMLSTSERAGSG 181
            LSL+VSDD +NIQIFYYAPKMSESWKGQKLLSRAEFHVGAHVTKFLRLQMLSTS+RAG+ 
Sbjct: 1270 LSLMVSDDNRNIQIFYYAPKMSESWKGQKLLSRAEFHVGAHVTKFLRLQMLSTSDRAGAV 1329

Query: 182  PGSDKTNRFALLFGTLDGSIGCIAPLDEITFRRLQSLQRKLADAVPHVAGLNPKAFRQFR 361
            PGSDKTNRFALLFGTLDGSIGCIAPLDEITFRRLQSLQRKL DAVPHVAGLNP+AFR FR
Sbjct: 1330 PGSDKTNRFALLFGTLDGSIGCIAPLDEITFRRLQSLQRKLVDAVPHVAGLNPRAFRLFR 1389

Query: 362  SNGKAHRPGPDSIVDCELLCHYEMLPLEEQLEIAQQVGTTRSQVLTNLSDLSLGTSFL 535
            SNGKAHRPGPDSIVDCELLCHYEMLPLEEQLEIA QVGTTRSQ+L+NLSDLSLGTSFL
Sbjct: 1390 SNGKAHRPGPDSIVDCELLCHYEMLPLEEQLEIAHQVGTTRSQILSNLSDLSLGTSFL 1447


>emb|CBI24510.3| unnamed protein product [Vitis vinifera]
          Length = 1448

 Score =  321 bits (822), Expect = 1e-85
 Identities = 157/179 (87%), Positives = 171/179 (95%), Gaps = 1/179 (0%)
 Frame = +2

Query: 2    LSLLVSDDQKNIQIFYYAPKMSESWKGQKLLSRAEFHVGAHVTKFLRLQML-STSERAGS 178
            LSL+VSDDQKNIQIFYYAPKMSESWKGQKLLSRAEFHVGAHVTKFLRLQML ++S+R  +
Sbjct: 1270 LSLIVSDDQKNIQIFYYAPKMSESWKGQKLLSRAEFHVGAHVTKFLRLQMLPASSDRTSA 1329

Query: 179  GPGSDKTNRFALLFGTLDGSIGCIAPLDEITFRRLQSLQRKLADAVPHVAGLNPKAFRQF 358
              GSDKTNRFALLFGTLDGSIGCIAPLDE+TFRRLQSLQ+KL DAVPHVAGLNP++FRQF
Sbjct: 1330 TQGSDKTNRFALLFGTLDGSIGCIAPLDELTFRRLQSLQKKLVDAVPHVAGLNPRSFRQF 1389

Query: 359  RSNGKAHRPGPDSIVDCELLCHYEMLPLEEQLEIAQQVGTTRSQVLTNLSDLSLGTSFL 535
            RSNGKAHRPGPD+IVDCELLCHYEMLP EEQLEIAQQ+GTTR Q+L+NL+DLSLGTSFL
Sbjct: 1390 RSNGKAHRPGPDNIVDCELLCHYEMLPFEEQLEIAQQIGTTRMQILSNLNDLSLGTSFL 1448


>ref|XP_002268371.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            1-like [Vitis vinifera]
          Length = 1442

 Score =  321 bits (822), Expect = 1e-85
 Identities = 157/179 (87%), Positives = 171/179 (95%), Gaps = 1/179 (0%)
 Frame = +2

Query: 2    LSLLVSDDQKNIQIFYYAPKMSESWKGQKLLSRAEFHVGAHVTKFLRLQML-STSERAGS 178
            LSL+VSDDQKNIQIFYYAPKMSESWKGQKLLSRAEFHVGAHVTKFLRLQML ++S+R  +
Sbjct: 1264 LSLIVSDDQKNIQIFYYAPKMSESWKGQKLLSRAEFHVGAHVTKFLRLQMLPASSDRTSA 1323

Query: 179  GPGSDKTNRFALLFGTLDGSIGCIAPLDEITFRRLQSLQRKLADAVPHVAGLNPKAFRQF 358
              GSDKTNRFALLFGTLDGSIGCIAPLDE+TFRRLQSLQ+KL DAVPHVAGLNP++FRQF
Sbjct: 1324 TQGSDKTNRFALLFGTLDGSIGCIAPLDELTFRRLQSLQKKLVDAVPHVAGLNPRSFRQF 1383

Query: 359  RSNGKAHRPGPDSIVDCELLCHYEMLPLEEQLEIAQQVGTTRSQVLTNLSDLSLGTSFL 535
            RSNGKAHRPGPD+IVDCELLCHYEMLP EEQLEIAQQ+GTTR Q+L+NL+DLSLGTSFL
Sbjct: 1384 RSNGKAHRPGPDNIVDCELLCHYEMLPFEEQLEIAQQIGTTRMQILSNLNDLSLGTSFL 1442


>ref|XP_002510905.1| cleavage and polyadenylation specificity factor cpsf, putative
            [Ricinus communis] gi|223550020|gb|EEF51507.1| cleavage
            and polyadenylation specificity factor cpsf, putative
            [Ricinus communis]
          Length = 1461

 Score =  315 bits (808), Expect = 4e-84
 Identities = 154/179 (86%), Positives = 171/179 (95%), Gaps = 1/179 (0%)
 Frame = +2

Query: 2    LSLLVSDDQKNIQIFYYAPKMSESWKGQKLLSRAEFHVGAHVTKFLRLQMLSTS-ERAGS 178
            LSL+VSD+QKNIQIFYYAPKM ESWKGQKLLSRAEFHVGAH+TKF+RL MLSTS +R+G+
Sbjct: 1283 LSLVVSDEQKNIQIFYYAPKMLESWKGQKLLSRAEFHVGAHITKFIRLSMLSTSSDRSGA 1342

Query: 179  GPGSDKTNRFALLFGTLDGSIGCIAPLDEITFRRLQSLQRKLADAVPHVAGLNPKAFRQF 358
             PG DKTNRFALLFGTLDGSIGCIAPLDE+TFRRLQSLQRKL DAVPHVAGLNP++FRQF
Sbjct: 1343 APGPDKTNRFALLFGTLDGSIGCIAPLDELTFRRLQSLQRKLVDAVPHVAGLNPRSFRQF 1402

Query: 359  RSNGKAHRPGPDSIVDCELLCHYEMLPLEEQLEIAQQVGTTRSQVLTNLSDLSLGTSFL 535
            RS+GK HRPGP+SIVDCELL H+EMLPLEEQLEIAQQVGTTR+Q+L+NL+DLSLGTSFL
Sbjct: 1403 RSDGKVHRPGPESIVDCELLSHFEMLPLEEQLEIAQQVGTTRAQILSNLNDLSLGTSFL 1461