BLASTX nr result

ID: Glycyrrhiza24_contig00021556 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00021556
         (343 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003592512.1| Xylosidase [Medicago truncatula] gi|35548156...   211   5e-53
ref|XP_003555294.1| PREDICTED: LOW QUALITY PROTEIN: probable bet...   201   7e-50
ref|NP_188596.1| putative beta-D-xylosidase 5 [Arabidopsis thali...   180   1e-43
dbj|BAB02547.1| beta-1,4-xylosidase [Arabidopsis thaliana]            180   1e-43
ref|XP_002885319.1| beta-1,4-xylosidase [Arabidopsis lyrata subs...   176   1e-42

>ref|XP_003592512.1| Xylosidase [Medicago truncatula] gi|355481560|gb|AES62763.1|
           Xylosidase [Medicago truncatula]
          Length = 781

 Score =  211 bits (537), Expect = 5e-53
 Identities = 104/115 (90%), Positives = 111/115 (96%), Gaps = 1/115 (0%)
 Frame = +2

Query: 2   LMRLGFFDNPKSLPFANLGPSDVCTKDNQQLALEAAKQGIVLLEN-KGVLPLSKTKVKNL 178
           LMRLGFF+NPKSLPFANLGPSDVCTK+NQQLALEAAKQGIVLLEN KG LPLSKTK+KNL
Sbjct: 356 LMRLGFFENPKSLPFANLGPSDVCTKENQQLALEAAKQGIVLLENNKGALPLSKTKIKNL 415

Query: 179 AVIGPNANATTVMISNYAGIPCRYTSPLQGLQKYISSVTYARGCGNVKCGDQSLF 343
           AVIGPNANATTVMISNYAGIPCRY+SPLQGLQKYISSVTYARGC +VKC +Q+LF
Sbjct: 416 AVIGPNANATTVMISNYAGIPCRYSSPLQGLQKYISSVTYARGCSDVKCSNQNLF 470


>ref|XP_003555294.1| PREDICTED: LOW QUALITY PROTEIN: probable beta-D-xylosidase 5-like
           [Glycine max]
          Length = 901

 Score =  201 bits (510), Expect = 7e-50
 Identities = 100/114 (87%), Positives = 105/114 (92%), Gaps = 1/114 (0%)
 Frame = +2

Query: 2   LMRLGFFDNPKSLPFANLGPSDVCTKDNQQLALEAAKQGIVLLENK-GVLPLSKTKVKNL 178
           LMRLGFFD+PKSLPFANLGPSDVCTKDNQQLAL+AAKQGIVLLEN  G LPLS+T +K L
Sbjct: 354 LMRLGFFDDPKSLPFANLGPSDVCTKDNQQLALDAAKQGIVLLENNNGALPLSQTNIKKL 413

Query: 179 AVIGPNANATTVMISNYAGIPCRYTSPLQGLQKYISSVTYARGCGNVKCGDQSL 340
           AVIGPNANATTVMISNYAGIPCRYTSPLQGLQKYISSV YA GC NVKC +QSL
Sbjct: 414 AVIGPNANATTVMISNYAGIPCRYTSPLQGLQKYISSVNYAPGCSNVKCDNQSL 467


>ref|NP_188596.1| putative beta-D-xylosidase 5 [Arabidopsis thaliana]
           gi|259585724|sp|Q9LJN4.2|BXL5_ARATH RecName:
           Full=Probable beta-D-xylosidase 5; Short=AtBXL5; Flags:
           Precursor gi|332642747|gb|AEE76268.1| putative
           beta-D-xylosidase 5 [Arabidopsis thaliana]
          Length = 781

 Score =  180 bits (456), Expect = 1e-43
 Identities = 89/115 (77%), Positives = 100/115 (86%), Gaps = 2/115 (1%)
 Frame = +2

Query: 2   LMRLGFFD-NPKSLPFANLGPSDVCTKDNQQLALEAAKQGIVLLENKGVLPLSKTKVKNL 178
           LMRLGFFD +PKSLPF NLGPSDVC+KD+Q LALEAAKQGIVLLEN+G LPL KT VK L
Sbjct: 357 LMRLGFFDGDPKSLPFGNLGPSDVCSKDHQMLALEAAKQGIVLLENRGDLPLPKTTVKKL 416

Query: 179 AVIGPNANATTVMISNYAGIPCRYTSPLQGLQKYI-SSVTYARGCGNVKCGDQSL 340
           AVIGPNANAT VMISNYAG+PC+YTSP+QGLQKY+   + Y  GC +VKCGDQ+L
Sbjct: 417 AVIGPNANATKVMISNYAGVPCKYTSPIQGLQKYVPEKIVYEPGCKDVKCGDQTL 471


>dbj|BAB02547.1| beta-1,4-xylosidase [Arabidopsis thaliana]
          Length = 876

 Score =  180 bits (456), Expect = 1e-43
 Identities = 89/115 (77%), Positives = 100/115 (86%), Gaps = 2/115 (1%)
 Frame = +2

Query: 2   LMRLGFFD-NPKSLPFANLGPSDVCTKDNQQLALEAAKQGIVLLENKGVLPLSKTKVKNL 178
           LMRLGFFD +PKSLPF NLGPSDVC+KD+Q LALEAAKQGIVLLEN+G LPL KT VK L
Sbjct: 357 LMRLGFFDGDPKSLPFGNLGPSDVCSKDHQMLALEAAKQGIVLLENRGDLPLPKTTVKKL 416

Query: 179 AVIGPNANATTVMISNYAGIPCRYTSPLQGLQKYI-SSVTYARGCGNVKCGDQSL 340
           AVIGPNANAT VMISNYAG+PC+YTSP+QGLQKY+   + Y  GC +VKCGDQ+L
Sbjct: 417 AVIGPNANATKVMISNYAGVPCKYTSPIQGLQKYVPEKIVYEPGCKDVKCGDQTL 471


>ref|XP_002885319.1| beta-1,4-xylosidase [Arabidopsis lyrata subsp. lyrata]
           gi|297331159|gb|EFH61578.1| beta-1,4-xylosidase
           [Arabidopsis lyrata subsp. lyrata]
          Length = 865

 Score =  176 bits (447), Expect = 1e-42
 Identities = 88/115 (76%), Positives = 99/115 (86%), Gaps = 2/115 (1%)
 Frame = +2

Query: 2   LMRLGFFD-NPKSLPFANLGPSDVCTKDNQQLALEAAKQGIVLLENKGVLPLSKTKVKNL 178
           LMRLGFFD +PKSLPF  LGPSDVC+KD+Q LALEAAKQGIVLLEN+G LPLSKT VK +
Sbjct: 346 LMRLGFFDGDPKSLPFGQLGPSDVCSKDHQMLALEAAKQGIVLLENRGDLPLSKTAVKKI 405

Query: 179 AVIGPNANATTVMISNYAGIPCRYTSPLQGLQKYI-SSVTYARGCGNVKCGDQSL 340
           AVIGPNANAT VMISNYAG+PC+YTSPLQGLQKY+   V Y  GC +V CG+Q+L
Sbjct: 406 AVIGPNANATKVMISNYAGVPCKYTSPLQGLQKYVPEKVVYEPGCKDVNCGEQTL 460


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