BLASTX nr result

ID: Glycyrrhiza24_contig00021555 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00021555
         (165 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003607688.1| Pentatricopeptide repeat-containing protein ...    72   5e-11
ref|XP_003526188.1| PREDICTED: pentatricopeptide repeat-containi...    67   1e-09
gb|AFK44709.1| unknown [Lotus japonicus]                               58   9e-07

>ref|XP_003607688.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355508743|gb|AES89885.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 1353

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 36/40 (90%), Positives = 39/40 (97%)
 Frame = -2

Query: 164 LLALCESDRKTQIVDVLKNIDITKLTSAESIANIFQSLGR 45
           LLALCESDRKTQI+DVLKNIDITKL SA+SI+NIFQSLGR
Sbjct: 291 LLALCESDRKTQILDVLKNIDITKLKSAKSISNIFQSLGR 330


>ref|XP_003526188.1| PREDICTED: pentatricopeptide repeat-containing protein At4g04790,
           mitochondrial-like [Glycine max]
          Length = 1117

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 32/40 (80%), Positives = 39/40 (97%)
 Frame = -2

Query: 164 LLALCESDRKTQIVDVLKNIDITKLTSAESIANIFQSLGR 45
           L+ALCESDRK QI+DV+KNID+TKL+SA+SIA+IFQSLGR
Sbjct: 288 LMALCESDRKMQILDVVKNIDVTKLSSAKSIADIFQSLGR 327


>gb|AFK44709.1| unknown [Lotus japonicus]
          Length = 217

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 28/40 (70%), Positives = 36/40 (90%)
 Frame = -2

Query: 164 LLALCESDRKTQIVDVLKNIDITKLTSAESIANIFQSLGR 45
           LLALCESDRK +I+++L+ IDI KL+SAES+A IFQ+LGR
Sbjct: 97  LLALCESDRKEKILELLEIIDIKKLSSAESVAKIFQALGR 136


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