BLASTX nr result

ID: Glycyrrhiza24_contig00021542 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00021542
         (591 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003520839.1| PREDICTED: uncharacterized protein LOC100797...   350   1e-94
ref|XP_003553759.1| PREDICTED: uncharacterized protein LOC100783...   344   6e-93
ref|XP_003591404.1| Mediator of RNA polymerase II transcription ...   321   7e-86
ref|XP_002319641.1| predicted protein [Populus trichocarpa] gi|2...   287   8e-76
ref|XP_004139381.1| PREDICTED: mediator of RNA polymerase II tra...   285   5e-75

>ref|XP_003520839.1| PREDICTED: uncharacterized protein LOC100797588 [Glycine max]
          Length = 1813

 Score =  350 bits (897), Expect = 1e-94
 Identities = 174/197 (88%), Positives = 183/197 (92%)
 Frame = -1

Query: 591 HGASSSSMQNPDGESDSSGLRTPGLKIIYWLDFDKNAGMSELGACPFIKIEPGPDLQIKC 412
           HGASSSS  NPDGESDSS +RTPGLKI+YWLDFDKNAG SE G CPF+KIEPG DLQIKC
Sbjct: 291 HGASSSSALNPDGESDSSAMRTPGLKIVYWLDFDKNAGASESGTCPFLKIEPGSDLQIKC 350

Query: 411 THSNFVIDPLTGKEAEFFLDQSCIDVERLLLRAICCNKYTRLLEIKRELAKNVQVCRTAD 232
            HS+FVIDPL GKEAEF LDQSCIDVERLLLRAICCNKYTRLLEIKREL KNVQVCRTAD
Sbjct: 351 LHSSFVIDPLMGKEAEFVLDQSCIDVERLLLRAICCNKYTRLLEIKRELVKNVQVCRTAD 410

Query: 231 DVVLQSRMGEPDIEHKQKDDKCCSRDSEGHEVLRVRAYGSSFFTLGINIRNGRFLLQSSQ 52
           DVVLQS+MGE DIE+KQ DDKCCS+DSEGHEVL VRAYGSSFFTLGINIRNGRFLLQSSQ
Sbjct: 411 DVVLQSQMGELDIEYKQ-DDKCCSKDSEGHEVLCVRAYGSSFFTLGINIRNGRFLLQSSQ 469

Query: 51  DIVVSSALLECEEALNK 1
           +IVVSSALLECEEALN+
Sbjct: 470 NIVVSSALLECEEALNQ 486


>ref|XP_003553759.1| PREDICTED: uncharacterized protein LOC100783484 [Glycine max]
          Length = 1718

 Score =  344 bits (883), Expect = 6e-93
 Identities = 172/197 (87%), Positives = 180/197 (91%)
 Frame = -1

Query: 591 HGASSSSMQNPDGESDSSGLRTPGLKIIYWLDFDKNAGMSELGACPFIKIEPGPDLQIKC 412
           HGASSSS QNPDGESDSS +RTPGLKI+YWLDFDKNAG SE G CPFIKIEPG DLQIKC
Sbjct: 291 HGASSSSAQNPDGESDSSAMRTPGLKIVYWLDFDKNAGASESGTCPFIKIEPGSDLQIKC 350

Query: 411 THSNFVIDPLTGKEAEFFLDQSCIDVERLLLRAICCNKYTRLLEIKRELAKNVQVCRTAD 232
            HS FVIDPLT K+AEF LDQSCIDVERLLLRAICCN+YTRLLEIKREL KNVQVCRT D
Sbjct: 351 LHSIFVIDPLTAKDAEFVLDQSCIDVERLLLRAICCNRYTRLLEIKRELVKNVQVCRTTD 410

Query: 231 DVVLQSRMGEPDIEHKQKDDKCCSRDSEGHEVLRVRAYGSSFFTLGINIRNGRFLLQSSQ 52
           DVVLQS+MGEPDIE+KQ   KC S+D EGHEVLRVRAYGSSFFTLGINIRNGRFLLQSSQ
Sbjct: 411 DVVLQSQMGEPDIEYKQ---KCHSKDFEGHEVLRVRAYGSSFFTLGINIRNGRFLLQSSQ 467

Query: 51  DIVVSSALLECEEALNK 1
           DIVVSSALLECEEALN+
Sbjct: 468 DIVVSSALLECEEALNQ 484


>ref|XP_003591404.1| Mediator of RNA polymerase II transcription subunit [Medicago
           truncatula] gi|355480452|gb|AES61655.1| Mediator of RNA
           polymerase II transcription subunit [Medicago
           truncatula]
          Length = 1765

 Score =  321 bits (822), Expect = 7e-86
 Identities = 165/215 (76%), Positives = 175/215 (81%), Gaps = 27/215 (12%)
 Frame = -1

Query: 564 NPDGESDSSGLRTPGLKIIYWLDFDKNAGMSELGACPFIKIEPGPDLQIKCTHSNFVIDP 385
           NPDGESDSSGLRTPGLKIIYWLDFDKNA +++ GACPFIKIEPG DLQIKCTHS FVIDP
Sbjct: 283 NPDGESDSSGLRTPGLKIIYWLDFDKNADVADSGACPFIKIEPGSDLQIKCTHSIFVIDP 342

Query: 384 LTGKEAEFFLDQSCIDVERLLLRAICCNKYTRLLEIKRELAKNVQVCRTADDVVLQSRMG 205
           LTGKEAEF LDQ+CIDVERLLLRAICCN+YTRLLEIK EL KNVQV RTADDVVLQSRMG
Sbjct: 343 LTGKEAEFLLDQNCIDVERLLLRAICCNRYTRLLEIKTELLKNVQVFRTADDVVLQSRMG 402

Query: 204 EPDIEHKQKDDKCCSRDSEGHEVLRVRAYGSSFFTLGINI-------------------- 85
           EPDIEHKQKDDK C++DSE HEVL V AYGSSFFTLGI+I                    
Sbjct: 403 EPDIEHKQKDDKRCNKDSEAHEVLHVHAYGSSFFTLGISIRYFISLVSFPNLLHFNLGIF 462

Query: 84  -------RNGRFLLQSSQDIVVSSALLECEEALNK 1
                  RNGRFLLQSSQ+I VSSALLECEEALN+
Sbjct: 463 QFPCFKFRNGRFLLQSSQNIAVSSALLECEEALNQ 497


>ref|XP_002319641.1| predicted protein [Populus trichocarpa] gi|222858017|gb|EEE95564.1|
           predicted protein [Populus trichocarpa]
          Length = 1740

 Score =  287 bits (735), Expect = 8e-76
 Identities = 139/195 (71%), Positives = 161/195 (82%)
 Frame = -1

Query: 585 ASSSSMQNPDGESDSSGLRTPGLKIIYWLDFDKNAGMSELGACPFIKIEPGPDLQIKCTH 406
           +S+++  N DGE DS+GLRTPGLKIIYWLD DKN+G S+ G CPFIKIEPGPDLQIKC H
Sbjct: 291 SSNATQLNQDGEVDSAGLRTPGLKIIYWLDLDKNSGTSDSGICPFIKIEPGPDLQIKCIH 350

Query: 405 SNFVIDPLTGKEAEFFLDQSCIDVERLLLRAICCNKYTRLLEIKRELAKNVQVCRTADDV 226
           S FVIDPL G+ AEF LDQSCIDVE+LLLRAICCN+YTRLLEI++EL KNVQ+CR A DV
Sbjct: 351 STFVIDPLNGRGAEFSLDQSCIDVEKLLLRAICCNRYTRLLEIQKELGKNVQICRAAGDV 410

Query: 225 VLQSRMGEPDIEHKQKDDKCCSRDSEGHEVLRVRAYGSSFFTLGINIRNGRFLLQSSQDI 46
            LQ  M EPD +HK+ + K    D EG EVL VRAYGSSFFTLGINIRNGRFLL+SSQ+I
Sbjct: 411 FLQFHMDEPDADHKKVETKSDGGDQEGQEVLHVRAYGSSFFTLGINIRNGRFLLRSSQNI 470

Query: 45  VVSSALLECEEALNK 1
           +  S L++ EEALN+
Sbjct: 471 ITPSVLIDFEEALNQ 485


>ref|XP_004139381.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           14-like [Cucumis sativus]
          Length = 1800

 Score =  285 bits (728), Expect = 5e-75
 Identities = 143/207 (69%), Positives = 165/207 (79%), Gaps = 15/207 (7%)
 Frame = -1

Query: 576 SSMQNPDGESDSSGLRTPGLKIIYWLDFDKNAGMSELGACPFIKIEPGPDLQIKCTHSNF 397
           S+  N DGE+D SGLRTPGLKI+YWLDFDKN G S+ G+CPFIKIEPGPD+QIKC HS F
Sbjct: 295 STQLNHDGETDLSGLRTPGLKIMYWLDFDKNTGSSDPGSCPFIKIEPGPDMQIKCVHSTF 354

Query: 396 VIDPLTGKEAEFFLDQSCIDVERLLLRAICCNKYTRLLEIKRELAKNVQVCRTADDVVLQ 217
           VIDPLT KEAEFFLDQSCIDVE+LLLRAICCNKYTRLLEI++EL KNVQ+CRTADDVVL+
Sbjct: 355 VIDPLTNKEAEFFLDQSCIDVEKLLLRAICCNKYTRLLEIQKELKKNVQICRTADDVVLE 414

Query: 216 SRMGEPDIEHKQKDDKCCSRDSEGHEVLRVRAYGSSFFTLGIN---------------IR 82
            ++ EPD++ K+KD        EG E+LRVRAYGSSFFTLGIN                R
Sbjct: 415 HQVDEPDVDPKKKDKIHDPIAFEGEEILRVRAYGSSFFTLGINTRFLSALMSLTHCFVCR 474

Query: 81  NGRFLLQSSQDIVVSSALLECEEALNK 1
           NGRFLLQSS + +V+S+L ECEEALN+
Sbjct: 475 NGRFLLQSSHNKLVTSSLTECEEALNQ 501


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