BLASTX nr result

ID: Glycyrrhiza24_contig00021541 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00021541
         (280 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004166115.1| PREDICTED: DNA repair protein RAD50-like, pa...   142   4e-32
ref|XP_004133980.1| PREDICTED: DNA repair protein RAD50-like [Cu...   142   4e-32
ref|XP_003552170.1| PREDICTED: DNA repair protein RAD50-like [Gl...   140   8e-32
ref|XP_002522807.1| DNA repair protein RAD50, putative [Ricinus ...   139   2e-31
ref|XP_002300148.1| predicted protein [Populus trichocarpa] gi|2...   139   2e-31

>ref|XP_004166115.1| PREDICTED: DNA repair protein RAD50-like, partial [Cucumis sativus]
          Length = 1088

 Score =  142 bits (357), Expect = 4e-32
 Identities = 68/69 (98%), Positives = 69/69 (100%)
 Frame = -1

Query: 280  FHTMKMEEINKIIRELWQQTYRGQDIDYINIHSDSEGAGTRSYSYRVLMQTGDAELEMRG 101
            FHTMKMEEINKIIRELWQQTYRGQDIDYI+IHSDSEGAGTRSYSYRVLMQTGDAELEMRG
Sbjct: 922  FHTMKMEEINKIIRELWQQTYRGQDIDYISIHSDSEGAGTRSYSYRVLMQTGDAELEMRG 981

Query: 100  RCSAGQKVL 74
            RCSAGQKVL
Sbjct: 982  RCSAGQKVL 990



 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 28/28 (100%), Positives = 28/28 (100%)
 Frame = -3

Query: 86   SEGAGTRSYSYRVLMQTGDAELEMRGRC 3
            SEGAGTRSYSYRVLMQTGDAELEMRGRC
Sbjct: 956  SEGAGTRSYSYRVLMQTGDAELEMRGRC 983


>ref|XP_004133980.1| PREDICTED: DNA repair protein RAD50-like [Cucumis sativus]
          Length = 1316

 Score =  142 bits (357), Expect = 4e-32
 Identities = 68/69 (98%), Positives = 69/69 (100%)
 Frame = -1

Query: 280  FHTMKMEEINKIIRELWQQTYRGQDIDYINIHSDSEGAGTRSYSYRVLMQTGDAELEMRG 101
            FHTMKMEEINKIIRELWQQTYRGQDIDYI+IHSDSEGAGTRSYSYRVLMQTGDAELEMRG
Sbjct: 1150 FHTMKMEEINKIIRELWQQTYRGQDIDYISIHSDSEGAGTRSYSYRVLMQTGDAELEMRG 1209

Query: 100  RCSAGQKVL 74
            RCSAGQKVL
Sbjct: 1210 RCSAGQKVL 1218



 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 28/28 (100%), Positives = 28/28 (100%)
 Frame = -3

Query: 86   SEGAGTRSYSYRVLMQTGDAELEMRGRC 3
            SEGAGTRSYSYRVLMQTGDAELEMRGRC
Sbjct: 1184 SEGAGTRSYSYRVLMQTGDAELEMRGRC 1211


>ref|XP_003552170.1| PREDICTED: DNA repair protein RAD50-like [Glycine max]
          Length = 1316

 Score =  140 bits (354), Expect = 8e-32
 Identities = 67/69 (97%), Positives = 69/69 (100%)
 Frame = -1

Query: 280  FHTMKMEEINKIIRELWQQTYRGQDIDYINIHSDSEGAGTRSYSYRVLMQTGDAELEMRG 101
            FHTMKMEEINKIIRELWQQTYRGQDIDYI+IHSDSEGAGTRSYSY+VLMQTGDAELEMRG
Sbjct: 1150 FHTMKMEEINKIIRELWQQTYRGQDIDYISIHSDSEGAGTRSYSYKVLMQTGDAELEMRG 1209

Query: 100  RCSAGQKVL 74
            RCSAGQKVL
Sbjct: 1210 RCSAGQKVL 1218



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 27/28 (96%), Positives = 28/28 (100%)
 Frame = -3

Query: 86   SEGAGTRSYSYRVLMQTGDAELEMRGRC 3
            SEGAGTRSYSY+VLMQTGDAELEMRGRC
Sbjct: 1184 SEGAGTRSYSYKVLMQTGDAELEMRGRC 1211


>ref|XP_002522807.1| DNA repair protein RAD50, putative [Ricinus communis]
            gi|223538045|gb|EEF39658.1| DNA repair protein RAD50,
            putative [Ricinus communis]
          Length = 1256

 Score =  139 bits (351), Expect = 2e-31
 Identities = 66/69 (95%), Positives = 69/69 (100%)
 Frame = -1

Query: 280  FHTMKMEEINKIIRELWQQTYRGQDIDYINIHSDSEGAGTRSYSYRVLMQTGDAELEMRG 101
            FHTMKMEEINKIIRELWQQTYRGQDIDYI+IHSDSEGAGTRSYSY+V+MQTGDAELEMRG
Sbjct: 1137 FHTMKMEEINKIIRELWQQTYRGQDIDYISIHSDSEGAGTRSYSYKVVMQTGDAELEMRG 1196

Query: 100  RCSAGQKVL 74
            RCSAGQKVL
Sbjct: 1197 RCSAGQKVL 1205



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 26/28 (92%), Positives = 28/28 (100%)
 Frame = -3

Query: 86   SEGAGTRSYSYRVLMQTGDAELEMRGRC 3
            SEGAGTRSYSY+V+MQTGDAELEMRGRC
Sbjct: 1171 SEGAGTRSYSYKVVMQTGDAELEMRGRC 1198


>ref|XP_002300148.1| predicted protein [Populus trichocarpa] gi|222847406|gb|EEE84953.1|
            predicted protein [Populus trichocarpa]
          Length = 1316

 Score =  139 bits (351), Expect = 2e-31
 Identities = 66/69 (95%), Positives = 69/69 (100%)
 Frame = -1

Query: 280  FHTMKMEEINKIIRELWQQTYRGQDIDYINIHSDSEGAGTRSYSYRVLMQTGDAELEMRG 101
            FHTMKMEEINKIIRELWQQTYRGQDIDYI+IHSDSEGAGTRSYSY+V+MQTGDAELEMRG
Sbjct: 1150 FHTMKMEEINKIIRELWQQTYRGQDIDYISIHSDSEGAGTRSYSYKVVMQTGDAELEMRG 1209

Query: 100  RCSAGQKVL 74
            RCSAGQKVL
Sbjct: 1210 RCSAGQKVL 1218



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 26/28 (92%), Positives = 28/28 (100%)
 Frame = -3

Query: 86   SEGAGTRSYSYRVLMQTGDAELEMRGRC 3
            SEGAGTRSYSY+V+MQTGDAELEMRGRC
Sbjct: 1184 SEGAGTRSYSYKVVMQTGDAELEMRGRC 1211


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