BLASTX nr result

ID: Glycyrrhiza24_contig00021473 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00021473
         (483 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003548799.1| PREDICTED: transportin-3-like [Glycine max]       219   2e-55
ref|XP_003624561.1| Transportin-3 [Medicago truncatula] gi|35549...   211   5e-53
ref|XP_002276597.2| PREDICTED: transportin-3-like [Vitis vinifer...   193   1e-47
ref|XP_002321068.1| predicted protein [Populus trichocarpa] gi|2...   188   3e-46
ref|XP_004161339.1| PREDICTED: transportin-3-like [Cucumis sativus]   187   6e-46

>ref|XP_003548799.1| PREDICTED: transportin-3-like [Glycine max]
          Length = 1011

 Score =  219 bits (558), Expect = 2e-55
 Identities = 111/145 (76%), Positives = 116/145 (80%)
 Frame = +3

Query: 45  MELALKVAEAVHVLNHDTQSCNRVAANQWLVQFQQTHAAWDVATAILTSDRHHPLASNFE 224
           MELA+KVAEAVHVLNHDTQSCNRVAANQWLVQFQQTHAAWDVATAILT+DR  PL +NFE
Sbjct: 1   MELAMKVAEAVHVLNHDTQSCNRVAANQWLVQFQQTHAAWDVATAILTADRRLPLPANFE 60

Query: 225 VEFFAAQILKRKIQNEGYLLQXXXXXXXXXXXXXXVKRFSSGPPQLLTQICXXXXXXXXX 404
           VEFFAAQILKRKIQNEGYLLQ              VKRFS+GPPQLLTQIC         
Sbjct: 61  VEFFAAQILKRKIQNEGYLLQLGAKDALLNALLLAVKRFSTGPPQLLTQICLALSALVLQ 120

Query: 405 XXXHGNPIEQLFYSLRNLQTQDDGN 479
              HGNPIEQLFYSLRNLQ+QDDGN
Sbjct: 121 VAAHGNPIEQLFYSLRNLQSQDDGN 145


>ref|XP_003624561.1| Transportin-3 [Medicago truncatula] gi|355499576|gb|AES80779.1|
           Transportin-3 [Medicago truncatula]
          Length = 1143

 Score =  211 bits (537), Expect = 5e-53
 Identities = 108/146 (73%), Positives = 115/146 (78%)
 Frame = +3

Query: 45  MELALKVAEAVHVLNHDTQSCNRVAANQWLVQFQQTHAAWDVATAILTSDRHHPLASNFE 224
           MELA+KV EAVHVLNHDTQSCNRVAANQWLVQFQQTHAAWDVAT ILTSDR H  ASNFE
Sbjct: 1   MELAMKVGEAVHVLNHDTQSCNRVAANQWLVQFQQTHAAWDVATNILTSDRRH--ASNFE 58

Query: 225 VEFFAAQILKRKIQNEGYLLQXXXXXXXXXXXXXXVKRFSSGPPQLLTQICXXXXXXXXX 404
           +EFFAAQILKRKIQNEGYLLQ              VKRFSSGPPQLLTQIC         
Sbjct: 59  LEFFAAQILKRKIQNEGYLLQSGPKDALLNALLLAVKRFSSGPPQLLTQICLALSALVLQ 118

Query: 405 XXXHGNPIEQLFYSLRNLQTQDDGNV 482
              HGNPIEQLFYSLRNLQ++++GN+
Sbjct: 119 VVAHGNPIEQLFYSLRNLQSEENGNI 144


>ref|XP_002276597.2| PREDICTED: transportin-3-like [Vitis vinifera]
           gi|296082227|emb|CBI21232.3| unnamed protein product
           [Vitis vinifera]
          Length = 1015

 Score =  193 bits (491), Expect = 1e-47
 Identities = 100/149 (67%), Positives = 108/149 (72%), Gaps = 3/149 (2%)
 Frame = +3

Query: 45  MELALKVAEAVHVLNHDTQSCNRVAANQWLVQFQQTHAAWDVATAILTSDRH---HPLAS 215
           MEL +KVA+AVHVLNHD+QSCNRVAANQWLVQFQQT  AWDVAT+ILTSD H   H   S
Sbjct: 1   MELQIKVAQAVHVLNHDSQSCNRVAANQWLVQFQQTDLAWDVATSILTSDHHRHHHSFLS 60

Query: 216 NFEVEFFAAQILKRKIQNEGYLLQXXXXXXXXXXXXXXVKRFSSGPPQLLTQICXXXXXX 395
           +FEVEFFAAQILKRKIQNEGY LQ               KRFSSGPPQLLTQIC      
Sbjct: 61  DFEVEFFAAQILKRKIQNEGYYLQLGAKDALLNALLLAAKRFSSGPPQLLTQICLALSAL 120

Query: 396 XXXXXXHGNPIEQLFYSLRNLQTQDDGNV 482
                 H  PIEQLFYSL+NLQ+QDD N+
Sbjct: 121 IIRSTEHRKPIEQLFYSLQNLQSQDDSNI 149


>ref|XP_002321068.1| predicted protein [Populus trichocarpa] gi|222861841|gb|EEE99383.1|
           predicted protein [Populus trichocarpa]
          Length = 1008

 Score =  188 bits (478), Expect = 3e-46
 Identities = 99/154 (64%), Positives = 108/154 (70%), Gaps = 8/154 (5%)
 Frame = +3

Query: 45  MELALKVAEAVHVLNHDTQSCNRVAANQWLVQFQQTHAAWDVATAILTSDRHH------- 203
           M+L +KVA+AVHVLNHDTQSCNRVAANQWLVQFQQT A W+VAT+ILTSD  H       
Sbjct: 1   MDLQMKVAQAVHVLNHDTQSCNRVAANQWLVQFQQTDAVWEVATSILTSDHLHLQQQTPP 60

Query: 204 -PLASNFEVEFFAAQILKRKIQNEGYLLQXXXXXXXXXXXXXXVKRFSSGPPQLLTQICX 380
            P  S+ EVEFFAAQILKRKIQ+EG+ LQ               KRFSSGPPQLLTQIC 
Sbjct: 61  PPFVSDLEVEFFAAQILKRKIQSEGHSLQLGVKDALLNALLVAAKRFSSGPPQLLTQICL 120

Query: 381 XXXXXXXXXXXHGNPIEQLFYSLRNLQTQDDGNV 482
                      HG PIEQLFYSLR LQ+QDDGNV
Sbjct: 121 ALAALMLCAVEHGKPIEQLFYSLRTLQSQDDGNV 154


>ref|XP_004161339.1| PREDICTED: transportin-3-like [Cucumis sativus]
          Length = 1029

 Score =  187 bits (476), Expect = 6e-46
 Identities = 98/150 (65%), Positives = 110/150 (73%), Gaps = 4/150 (2%)
 Frame = +3

Query: 45  MELALKVAEAVHVLNHDTQSCNRVAANQWLVQFQQTHAAWDVATAILTSDRHHPLASNF- 221
           MEL +KV++AVHVLNHDTQSCNRVAANQWLVQFQQT AAW+VATAILTSD   P  S+F 
Sbjct: 1   MELRMKVSQAVHVLNHDTQSCNRVAANQWLVQFQQTGAAWEVATAILTSDHVQPSMSSFV 60

Query: 222 ---EVEFFAAQILKRKIQNEGYLLQXXXXXXXXXXXXXXVKRFSSGPPQLLTQICXXXXX 392
              EVEFFAAQILKRKIQNEGYLLQ               K+FSSGPPQLLTQIC     
Sbjct: 61  PDLEVEFFAAQILKRKIQNEGYLLQLGVKDALLNALLVAAKKFSSGPPQLLTQICLALSA 120

Query: 393 XXXXXXXHGNPIEQLFYSLRNLQTQDDGNV 482
                  HG PI++LFYSL+NLQ+ D+GN+
Sbjct: 121 LILRTVEHGKPIDRLFYSLQNLQSVDNGNL 150