BLASTX nr result

ID: Glycyrrhiza24_contig00021472 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00021472
         (459 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAX83294.1| NADH dehydrogenase subunit B [Medicago sativa]         265   3e-69
ref|NP_084840.2| NADH dehydrogenase subunit 2 [Lotus japonicus] ...   265   4e-69
gb|AFU96377.1| NdhB, partial (chloroplast) [Linum usitatissimum]      265   4e-69
ref|XP_003599578.1| NAD(P)H-quinone oxidoreductase subunit 2 A [...   265   4e-69
ref|YP_001381686.1| NADH-plastoquinone oxidoreductase subunit 2 ...   265   4e-69

>gb|AAX83294.1| NADH dehydrogenase subunit B [Medicago sativa]
          Length = 379

 Score =  265 bits (677), Expect = 3e-69
 Identities = 134/152 (88%), Positives = 136/152 (89%)
 Frame = -3

Query: 457 RIFMKAFHLLLFDGSLIFPECXXXXXXXXXXXXXLTSDQKDISWFYFISSTSLVMSITAL 278
           RIFMKAFHLLLFDGS IFPE               TSDQK+ISWFYFISSTSLVMSITAL
Sbjct: 16  RIFMKAFHLLLFDGSFIFPELILIFGLILLLMIDSTSDQKEISWFYFISSTSLVMSITAL 75

Query: 277 LFRWREEPMISFSGNFQTNNFNEIFQFLILLSSTLCIPLSVEYIECTEMAITEFLLFVLT 98
           LFRWREEPMISFSGNFQTNNFNEIFQFLILLSSTLCIPLSVEYIECTEMAITEFLLF+LT
Sbjct: 76  LFRWREEPMISFSGNFQTNNFNEIFQFLILLSSTLCIPLSVEYIECTEMAITEFLLFILT 135

Query: 97  ATLGGMFLCSANDLITIFVALECFSLCSYLLS 2
           ATLGGMFLCSANDLITIFVALECFSLCSYLLS
Sbjct: 136 ATLGGMFLCSANDLITIFVALECFSLCSYLLS 167


>ref|NP_084840.2| NADH dehydrogenase subunit 2 [Lotus japonicus]
           gi|94421440|ref|NP_084855.2| NADH dehydrogenase subunit
           2 [Lotus japonicus] gi|288558940|sp|P0CC89.1|NU2C2_LOTJA
           RecName: Full=NAD(P)H-quinone oxidoreductase subunit 2
           B, chloroplastic; AltName: Full=NAD(P)H dehydrogenase,
           subunit 2 B; AltName: Full=NADH-plastoquinone
           oxidoreductase subunit 2 B
           gi|288561949|sp|P0CC88.1|NU2C1_LOTJA RecName:
           Full=NAD(P)H-quinone oxidoreductase subunit 2 A,
           chloroplastic; AltName: Full=NAD(P)H dehydrogenase,
           subunit 2 A; AltName: Full=NADH-plastoquinone
           oxidoreductase subunit 2 A
          Length = 510

 Score =  265 bits (676), Expect = 4e-69
 Identities = 134/152 (88%), Positives = 134/152 (88%)
 Frame = -3

Query: 457 RIFMKAFHLLLFDGSLIFPECXXXXXXXXXXXXXLTSDQKDISWFYFISSTSLVMSITAL 278
           RIFMKAFHLLLFDGS IFPEC              TSDQKDISWFYFISSTSLVMSI  L
Sbjct: 16  RIFMKAFHLLLFDGSFIFPECILIFGLILLLMIDSTSDQKDISWFYFISSTSLVMSIVVL 75

Query: 277 LFRWREEPMISFSGNFQTNNFNEIFQFLILLSSTLCIPLSVEYIECTEMAITEFLLFVLT 98
           LFRWREEPMISFSGNFQTNNFNEIFQFLILLSSTLCIPLSVEYIECTEMAITEFLLFVLT
Sbjct: 76  LFRWREEPMISFSGNFQTNNFNEIFQFLILLSSTLCIPLSVEYIECTEMAITEFLLFVLT 135

Query: 97  ATLGGMFLCSANDLITIFVALECFSLCSYLLS 2
           ATLGGMFLCSANDLITIFVA ECFSLCSYLLS
Sbjct: 136 ATLGGMFLCSANDLITIFVAPECFSLCSYLLS 167


>gb|AFU96377.1| NdhB, partial (chloroplast) [Linum usitatissimum]
          Length = 512

 Score =  265 bits (676), Expect = 4e-69
 Identities = 134/152 (88%), Positives = 134/152 (88%)
 Frame = -3

Query: 457 RIFMKAFHLLLFDGSLIFPECXXXXXXXXXXXXXLTSDQKDISWFYFISSTSLVMSITAL 278
           RIFMKAFHLLLFDGSLIFPEC              TSDQKDI WFYFIS TSLVMSITAL
Sbjct: 16  RIFMKAFHLLLFDGSLIFPECILIFGLILLLMIDSTSDQKDIPWFYFISLTSLVMSITAL 75

Query: 277 LFRWREEPMISFSGNFQTNNFNEIFQFLILLSSTLCIPLSVEYIECTEMAITEFLLFVLT 98
           LFRWREEPMISFSGNFQTNNFNEIFQFLILL STLCIPLSVEYIECTEMAITEFLLFVLT
Sbjct: 76  LFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEYIECTEMAITEFLLFVLT 135

Query: 97  ATLGGMFLCSANDLITIFVALECFSLCSYLLS 2
           ATLGGMFLC ANDLITIFVALECFSLCSYLLS
Sbjct: 136 ATLGGMFLCGANDLITIFVALECFSLCSYLLS 167


>ref|XP_003599578.1| NAD(P)H-quinone oxidoreductase subunit 2 A [Medicago truncatula]
           gi|355488626|gb|AES69829.1| NAD(P)H-quinone
           oxidoreductase subunit 2 A [Medicago truncatula]
          Length = 871

 Score =  265 bits (676), Expect = 4e-69
 Identities = 133/152 (87%), Positives = 136/152 (89%)
 Frame = -3

Query: 457 RIFMKAFHLLLFDGSLIFPECXXXXXXXXXXXXXLTSDQKDISWFYFISSTSLVMSITAL 278
           RIFMKAFHLL+FDGS IFPE               TSDQKD+SWFYFISSTSLVMSITAL
Sbjct: 320 RIFMKAFHLLVFDGSFIFPELILIFGLILLLMIDSTSDQKDLSWFYFISSTSLVMSITAL 379

Query: 277 LFRWREEPMISFSGNFQTNNFNEIFQFLILLSSTLCIPLSVEYIECTEMAITEFLLFVLT 98
           LFRWREEPMISFSGNFQTNNFNEIFQFLILLSSTLCIPLSVEYIECTEMAITEFLLF+LT
Sbjct: 380 LFRWREEPMISFSGNFQTNNFNEIFQFLILLSSTLCIPLSVEYIECTEMAITEFLLFILT 439

Query: 97  ATLGGMFLCSANDLITIFVALECFSLCSYLLS 2
           ATLGGMFLCSANDLITIFVALECFSLCSYLLS
Sbjct: 440 ATLGGMFLCSANDLITIFVALECFSLCSYLLS 471


>ref|YP_001381686.1| NADH-plastoquinone oxidoreductase subunit 2 [Medicago truncatula]
          Length = 477

 Score =  265 bits (676), Expect = 4e-69
 Identities = 133/152 (87%), Positives = 136/152 (89%)
 Frame = -3

Query: 457 RIFMKAFHLLLFDGSLIFPECXXXXXXXXXXXXXLTSDQKDISWFYFISSTSLVMSITAL 278
           RIFMKAFHLL+FDGS IFPE               TSDQKD+SWFYFISSTSLVMSITAL
Sbjct: 6   RIFMKAFHLLVFDGSFIFPELILIFGLILLLMIDSTSDQKDLSWFYFISSTSLVMSITAL 65

Query: 277 LFRWREEPMISFSGNFQTNNFNEIFQFLILLSSTLCIPLSVEYIECTEMAITEFLLFVLT 98
           LFRWREEPMISFSGNFQTNNFNEIFQFLILLSSTLCIPLSVEYIECTEMAITEFLLF+LT
Sbjct: 66  LFRWREEPMISFSGNFQTNNFNEIFQFLILLSSTLCIPLSVEYIECTEMAITEFLLFILT 125

Query: 97  ATLGGMFLCSANDLITIFVALECFSLCSYLLS 2
           ATLGGMFLCSANDLITIFVALECFSLCSYLLS
Sbjct: 126 ATLGGMFLCSANDLITIFVALECFSLCSYLLS 157


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