BLASTX nr result

ID: Glycyrrhiza24_contig00021461 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00021461
         (607 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003615476.1| Integral membrane protein-like protein [Medi...   187   1e-45
ref|XP_003518285.1| PREDICTED: uncharacterized protein LOC100788...   130   2e-28
ref|XP_003544267.1| PREDICTED: uncharacterized protein LOC100800...   123   3e-26

>ref|XP_003615476.1| Integral membrane protein-like protein [Medicago truncatula]
           gi|355516811|gb|AES98434.1| Integral membrane
           protein-like protein [Medicago truncatula]
          Length = 989

 Score =  187 bits (475), Expect = 1e-45
 Identities = 110/201 (54%), Positives = 129/201 (64%)
 Frame = +3

Query: 3   LFRNFGGASKPETSQSPSSTTAPNLQSPSNLPGSNPNWLISLFTSKRGKTATEQGDTSLE 182
           LFRNFGGASK ETSQ+ S           N+P S+PNW ISLFTS + KTATE GDTS E
Sbjct: 441 LFRNFGGASKDETSQNSS-----------NIPSSSPNWFISLFTSNKRKTATEPGDTSQE 489

Query: 183 HSRTGPAEQYHSTSINSNMPTSTEIGHPEGQLADTAPIENVKPIPDINRGHGMLNSLISS 362
           +S T PA+Q  ST I S + +S++IGHPEG L D   I+NVKP  D+N G   +NS ISS
Sbjct: 490 YSTTDPADQNQST-ITSPLLSSSDIGHPEGTLGDADLIKNVKPTSDVNHGRERMNSTISS 548

Query: 363 NGVQSVGQDFLDFSAKEQSLTGKLRTNEGEKKNASVDXXXXXXXXXXXXXXXXXXNNVGV 542
           NGVQSV QDF+DFS KEQSLT KLRT+   K   SVD                  N V V
Sbjct: 549 NGVQSVVQDFIDFSEKEQSLTRKLRTDNRGKNKTSVD--------------TTNTNTVEV 594

Query: 543 MPSMSFSNETVSKYESVQSVT 605
             S +FSN TVS+Y+SV+SVT
Sbjct: 595 TSSTNFSNGTVSEYKSVKSVT 615


>ref|XP_003518285.1| PREDICTED: uncharacterized protein LOC100788580 [Glycine max]
          Length = 792

 Score =  130 bits (327), Expect = 2e-28
 Identities = 83/175 (47%), Positives = 105/175 (60%), Gaps = 18/175 (10%)
 Frame = +3

Query: 3   LFRNFGGASKPETSQSPSSTTAPNLQSPSNLPGSNPNWLISLFTSKRGKTATEQGDTSLE 182
           +FR F GASK E++++P    A NLQ+PS   GSN NWL SLFT K+G   +   D  LE
Sbjct: 270 MFR-FDGASKSESARNPPIIPASNLQNPSIPQGSNANWLTSLFTWKKGGKTS---DAPLE 325

Query: 183 HSRTGPAEQYHSTSINSNMPTSTEIGHPEGQLADTAPIENVKPIPDINRGHGMLNSLISS 362
           HS  G AEQ +ST  +++ PTS EIG  +G LADT+ I+NVK   +I  GHG +NSLISS
Sbjct: 326 HSGAGSAEQRNSTLNSNDEPTSLEIGPSKGPLADTSDIKNVKSTSNIKHGHGGMNSLISS 385

Query: 363 ------------------NGVQSVGQDFLDFSAKEQSLTGKLRTNEGEKKNASVD 473
                             NGVQS  Q+ +DF A++Q L G     + EKKNASVD
Sbjct: 386 TNDLSSIQSGTKGAGDLMNGVQSDVQNSVDFLAEKQLLAGNQIFGKEEKKNASVD 440


>ref|XP_003544267.1| PREDICTED: uncharacterized protein LOC100800852 [Glycine max]
          Length = 647

 Score =  123 bits (308), Expect = 3e-26
 Identities = 71/149 (47%), Positives = 96/149 (64%), Gaps = 18/149 (12%)
 Frame = +3

Query: 15  FGGASKPETSQSPSSTTAPNLQSPSNLPGSNPNWLISLFTSKRGKTATEQGDTSLEHSRT 194
           F GA+K E++++  S  A NLQ+PS   GSN NWLISLF  K+G   ++  D  LE+S T
Sbjct: 468 FDGANKSESARNLPSIPASNLQNPSIPQGSNANWLISLFPWKKG---SKTSDAPLEYSGT 524

Query: 195 GPAEQYHSTSINSNMPTSTEIGHPEGQLADTAPIENVKPIPDINRGHGMLNSLISS---- 362
           G AEQ +ST  +++ P+STEIGH +G LADT+ I+NVKP  +IN GHG +NSL+SS    
Sbjct: 525 GSAEQPNSTLTSNDEPSSTEIGHSKGPLADTSDIKNVKPTSNINHGHGGMNSLMSSTNDL 584

Query: 363 --------------NGVQSVGQDFLDFSA 407
                         NGVQSV QD +D+++
Sbjct: 585 SSIQSGTKGAGDLMNGVQSVVQDSIDYAS 613


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