BLASTX nr result

ID: Glycyrrhiza24_contig00021447 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00021447
         (561 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003523530.1| PREDICTED: niemann-Pick C1 protein-like [Gly...   363   1e-98
ref|XP_003527640.1| PREDICTED: niemann-Pick C1 protein-like [Gly...   363   1e-98
ref|XP_002272383.2| PREDICTED: niemann-Pick C1 protein-like [Vit...   327   8e-88
emb|CBI40718.3| unnamed protein product [Vitis vinifera]              327   8e-88
emb|CAN75892.1| hypothetical protein VITISV_009389 [Vitis vinifera]   327   8e-88

>ref|XP_003523530.1| PREDICTED: niemann-Pick C1 protein-like [Glycine max]
          Length = 1257

 Score =  363 bits (932), Expect = 1e-98
 Identities = 171/186 (91%), Positives = 179/186 (96%)
 Frame = +3

Query: 3   AVKPDDLLSSKIQSLCPTITGNVCCTEAQFDTLRTQVQQAIPFLVGCPACLRNFLNLFCE 182
           AVKPDDLLSSKIQSLCPTITGNVCCTEAQF+TLRTQVQQAIPFLVGCPACLRNFLNLFCE
Sbjct: 41  AVKPDDLLSSKIQSLCPTITGNVCCTEAQFETLRTQVQQAIPFLVGCPACLRNFLNLFCE 100

Query: 183 LTCSPNQSLFINVTSVDKVGGNLTVGGIDYFVSDAFGEGLYESCKDVKFGTMNSRAMQFI 362
           LTCSPNQSLFINVTSVD VGGNLTVGGIDYFV+DAFGEGLYESCK+VKFGTMNSRA+QFI
Sbjct: 101 LTCSPNQSLFINVTSVDNVGGNLTVGGIDYFVTDAFGEGLYESCKEVKFGTMNSRALQFI 160

Query: 363 GGGAQNFKDWFAFIGKKAPPYGLGSPYAIMFQPNATKSSGMKPMNVSTYSCGDISLGCSC 542
           G GAQN+KDWF+FIG+KA P+GLGSPYAI F PNAT SS MKPMNVSTYSCGDISLGCSC
Sbjct: 161 GAGAQNYKDWFSFIGRKAAPHGLGSPYAITFWPNATASSDMKPMNVSTYSCGDISLGCSC 220

Query: 543 GDCPSS 560
           GDCPSS
Sbjct: 221 GDCPSS 226


>ref|XP_003527640.1| PREDICTED: niemann-Pick C1 protein-like [Glycine max]
          Length = 1283

 Score =  363 bits (931), Expect = 1e-98
 Identities = 171/186 (91%), Positives = 179/186 (96%)
 Frame = +3

Query: 3   AVKPDDLLSSKIQSLCPTITGNVCCTEAQFDTLRTQVQQAIPFLVGCPACLRNFLNLFCE 182
           AVKPDDLLSSKIQSLCPTITGNVCCTEAQF+TLRTQVQQAIPFLVGCPACLRNFLNLFCE
Sbjct: 67  AVKPDDLLSSKIQSLCPTITGNVCCTEAQFETLRTQVQQAIPFLVGCPACLRNFLNLFCE 126

Query: 183 LTCSPNQSLFINVTSVDKVGGNLTVGGIDYFVSDAFGEGLYESCKDVKFGTMNSRAMQFI 362
           LTCSPNQSLFINVTSVD V GN TVGGIDYFV+DAFGEGLYESCK+VKFGTMNSRA+QFI
Sbjct: 127 LTCSPNQSLFINVTSVDNVSGNSTVGGIDYFVTDAFGEGLYESCKEVKFGTMNSRALQFI 186

Query: 363 GGGAQNFKDWFAFIGKKAPPYGLGSPYAIMFQPNATKSSGMKPMNVSTYSCGDISLGCSC 542
           G GAQNFKDWFAFIG+KA P+GLGSPYAI F+PNAT+SS MKPMNVSTYSCGDISLGCSC
Sbjct: 187 GAGAQNFKDWFAFIGRKAAPHGLGSPYAITFRPNATESSDMKPMNVSTYSCGDISLGCSC 246

Query: 543 GDCPSS 560
           GDCPSS
Sbjct: 247 GDCPSS 252


>ref|XP_002272383.2| PREDICTED: niemann-Pick C1 protein-like [Vitis vinifera]
          Length = 1309

 Score =  327 bits (838), Expect = 8e-88
 Identities = 153/186 (82%), Positives = 168/186 (90%)
 Frame = +3

Query: 3   AVKPDDLLSSKIQSLCPTITGNVCCTEAQFDTLRTQVQQAIPFLVGCPACLRNFLNLFCE 182
           +VKPDDLLSSKIQS+CPTI+GNVCCTEAQFDTLRTQVQQAIPFLVGCPACLRNFLNLFCE
Sbjct: 89  SVKPDDLLSSKIQSMCPTISGNVCCTEAQFDTLRTQVQQAIPFLVGCPACLRNFLNLFCE 148

Query: 183 LTCSPNQSLFINVTSVDKVGGNLTVGGIDYFVSDAFGEGLYESCKDVKFGTMNSRAMQFI 362
           LTCSPNQSLFINVTSV KV  NLTV GI++ ++DAFGEGLY SCKDVKFGTMN+RA+ FI
Sbjct: 149 LTCSPNQSLFINVTSVSKVNNNLTVDGIEFIITDAFGEGLYNSCKDVKFGTMNTRAIDFI 208

Query: 363 GGGAQNFKDWFAFIGKKAPPYGLGSPYAIMFQPNATKSSGMKPMNVSTYSCGDISLGCSC 542
           G GA+ FK+WFAFIG +A P   GSPYAI FQP+  +SSGMKPMNVSTYSCGD SLGCSC
Sbjct: 209 GAGAKTFKEWFAFIGTRAAPSVPGSPYAINFQPSIAESSGMKPMNVSTYSCGDNSLGCSC 268

Query: 543 GDCPSS 560
           GDCPS+
Sbjct: 269 GDCPSA 274


>emb|CBI40718.3| unnamed protein product [Vitis vinifera]
          Length = 1242

 Score =  327 bits (838), Expect = 8e-88
 Identities = 153/186 (82%), Positives = 168/186 (90%)
 Frame = +3

Query: 3   AVKPDDLLSSKIQSLCPTITGNVCCTEAQFDTLRTQVQQAIPFLVGCPACLRNFLNLFCE 182
           +VKPDDLLSSKIQS+CPTI+GNVCCTEAQFDTLRTQVQQAIPFLVGCPACLRNFLNLFCE
Sbjct: 22  SVKPDDLLSSKIQSMCPTISGNVCCTEAQFDTLRTQVQQAIPFLVGCPACLRNFLNLFCE 81

Query: 183 LTCSPNQSLFINVTSVDKVGGNLTVGGIDYFVSDAFGEGLYESCKDVKFGTMNSRAMQFI 362
           LTCSPNQSLFINVTSV KV  NLTV GI++ ++DAFGEGLY SCKDVKFGTMN+RA+ FI
Sbjct: 82  LTCSPNQSLFINVTSVSKVNNNLTVDGIEFIITDAFGEGLYNSCKDVKFGTMNTRAIDFI 141

Query: 363 GGGAQNFKDWFAFIGKKAPPYGLGSPYAIMFQPNATKSSGMKPMNVSTYSCGDISLGCSC 542
           G GA+ FK+WFAFIG +A P   GSPYAI FQP+  +SSGMKPMNVSTYSCGD SLGCSC
Sbjct: 142 GAGAKTFKEWFAFIGTRAAPSVPGSPYAINFQPSIAESSGMKPMNVSTYSCGDNSLGCSC 201

Query: 543 GDCPSS 560
           GDCPS+
Sbjct: 202 GDCPSA 207


>emb|CAN75892.1| hypothetical protein VITISV_009389 [Vitis vinifera]
          Length = 1050

 Score =  327 bits (838), Expect = 8e-88
 Identities = 153/186 (82%), Positives = 168/186 (90%)
 Frame = +3

Query: 3   AVKPDDLLSSKIQSLCPTITGNVCCTEAQFDTLRTQVQQAIPFLVGCPACLRNFLNLFCE 182
           +VKPDDLLSSKIQS+CPTI+GNVCCTEAQFDTLRTQVQQAIPFLVGCPACLRNFLNLFCE
Sbjct: 22  SVKPDDLLSSKIQSMCPTISGNVCCTEAQFDTLRTQVQQAIPFLVGCPACLRNFLNLFCE 81

Query: 183 LTCSPNQSLFINVTSVDKVGGNLTVGGIDYFVSDAFGEGLYESCKDVKFGTMNSRAMQFI 362
           LTCSPNQSLFINVTSV KV  NLTV GI++ ++DAFGEGLY SCKDVKFGTMN+RA+ FI
Sbjct: 82  LTCSPNQSLFINVTSVSKVNNNLTVDGIEFIITDAFGEGLYNSCKDVKFGTMNTRAIDFI 141

Query: 363 GGGAQNFKDWFAFIGKKAPPYGLGSPYAIMFQPNATKSSGMKPMNVSTYSCGDISLGCSC 542
           G GA+ FK+WFAFIG +A P   GSPYAI FQP+  +SSGMKPMNVSTYSCGD SLGCSC
Sbjct: 142 GAGAKTFKEWFAFIGTRAAPSVPGSPYAINFQPSIAESSGMKPMNVSTYSCGDNSLGCSC 201

Query: 543 GDCPSS 560
           GDCPS+
Sbjct: 202 GDCPSA 207


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