BLASTX nr result

ID: Glycyrrhiza24_contig00021429 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00021429
         (327 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003520781.1| PREDICTED: pentatricopeptide repeat-containi...   147   1e-33
ref|XP_004163774.1| PREDICTED: putative pentatricopeptide repeat...   134   1e-29
ref|XP_002276220.2| PREDICTED: pentatricopeptide repeat-containi...   124   1e-26
emb|CAN76247.1| hypothetical protein VITISV_023383 [Vitis vinifera]   124   1e-26
emb|CBI18780.3| unnamed protein product [Vitis vinifera]              115   5e-24

>ref|XP_003520781.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 771

 Score =  147 bits (370), Expect = 1e-33
 Identities = 67/70 (95%), Positives = 68/70 (97%)
 Frame = -3

Query: 325 CHSEKLALAFGLLVLPAGSPVRIKKNLRTCGDCHTVMKFASEVFQREIIVRDINRFHRFT 146
           CHSEKLALAFGLLVLP GSPVRIKKNLRTCGDCHTVMKFASE+FQREIIVRDINRFHRFT
Sbjct: 702 CHSEKLALAFGLLVLPPGSPVRIKKNLRTCGDCHTVMKFASEIFQREIIVRDINRFHRFT 761

Query: 145 NGSCSCRDYW 116
           NGSCSC DYW
Sbjct: 762 NGSCSCMDYW 771


>ref|XP_004163774.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Cucumis sativus]
          Length = 556

 Score =  134 bits (336), Expect = 1e-29
 Identities = 60/69 (86%), Positives = 64/69 (92%)
 Frame = -3

Query: 322 HSEKLALAFGLLVLPAGSPVRIKKNLRTCGDCHTVMKFASEVFQREIIVRDINRFHRFTN 143
           HSEK+ALAFGLL LPAG+P+RIKKNLRTCGDCHTVMKFASE+F REIIVRDINRFH FTN
Sbjct: 488 HSEKIALAFGLLSLPAGAPIRIKKNLRTCGDCHTVMKFASEIFAREIIVRDINRFHHFTN 547

Query: 142 GSCSCRDYW 116
           G CSC DYW
Sbjct: 548 GICSCGDYW 556


>ref|XP_002276220.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Vitis vinifera]
          Length = 585

 Score =  124 bits (310), Expect = 1e-26
 Identities = 56/69 (81%), Positives = 60/69 (86%)
 Frame = -3

Query: 322 HSEKLALAFGLLVLPAGSPVRIKKNLRTCGDCHTVMKFASEVFQREIIVRDINRFHRFTN 143
           HSEKLALAFGLL LP  SP+RIKKNLRTCG CHTVMK AS++F REIIVRDINRFHRF +
Sbjct: 517 HSEKLALAFGLLTLPIDSPIRIKKNLRTCGHCHTVMKLASKIFDREIIVRDINRFHRFAD 576

Query: 142 GSCSCRDYW 116
           G CSC DYW
Sbjct: 577 GFCSCGDYW 585


>emb|CAN76247.1| hypothetical protein VITISV_023383 [Vitis vinifera]
          Length = 820

 Score =  124 bits (310), Expect = 1e-26
 Identities = 56/69 (81%), Positives = 60/69 (86%)
 Frame = -3

Query: 322 HSEKLALAFGLLVLPAGSPVRIKKNLRTCGDCHTVMKFASEVFQREIIVRDINRFHRFTN 143
           HSEKLALAFGLL LP  SP+RIKKNLRTCG CHTVMK AS++F REIIVRDINRFHRF +
Sbjct: 752 HSEKLALAFGLLTLPIDSPIRIKKNLRTCGHCHTVMKLASKIFDREIIVRDINRFHRFAD 811

Query: 142 GSCSCRDYW 116
           G CSC DYW
Sbjct: 812 GFCSCGDYW 820


>emb|CBI18780.3| unnamed protein product [Vitis vinifera]
          Length = 289

 Score =  115 bits (287), Expect = 5e-24
 Identities = 51/69 (73%), Positives = 56/69 (81%)
 Frame = -3

Query: 322 HSEKLALAFGLLVLPAGSPVRIKKNLRTCGDCHTVMKFASEVFQREIIVRDINRFHRFTN 143
           HSEKLALAF LL  P GSP+RIKKN+R CGDCH  +KF S+V  REIIVRD NRFHRF +
Sbjct: 221 HSEKLALAFALLNTPTGSPIRIKKNIRVCGDCHAAIKFVSKVVDREIIVRDTNRFHRFRD 280

Query: 142 GSCSCRDYW 116
           GSCSC DYW
Sbjct: 281 GSCSCGDYW 289


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