BLASTX nr result

ID: Glycyrrhiza24_contig00021420 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00021420
         (631 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003620153.1| DNA-binding protein RHL1 [Medicago truncatul...   132   4e-29
ref|XP_003533290.1| PREDICTED: DNA-binding protein RHL1-like [Gl...   130   2e-28
ref|XP_003549172.1| PREDICTED: DNA-binding protein RHL1-like [Gl...   129   6e-28
gb|AFK41524.1| unknown [Lotus japonicus]                               92   8e-17
ref|XP_004137530.1| PREDICTED: DNA-binding protein RHL1-like [Cu...    59   1e-06

>ref|XP_003620153.1| DNA-binding protein RHL1 [Medicago truncatula]
           gi|355495168|gb|AES76371.1| DNA-binding protein RHL1
           [Medicago truncatula]
          Length = 435

 Score =  132 bits (333), Expect = 4e-29
 Identities = 84/152 (55%), Positives = 94/152 (61%)
 Frame = -2

Query: 630 KKTVVIDIDNEDDAPGDQLPMENKDSASGSNSKKVSQSASATASRGSLVQATISTLFKKV 451
           K+T VIDID+EDDAP DQLP+ENK+ AS S +KK           G LVQATIS+LFKKV
Sbjct: 303 KETAVIDIDDEDDAPKDQLPVENKEPASVSKAKK-----------GLLVQATISSLFKKV 351

Query: 450 EEKEXXXXXXXXXXXXXSGQKLQPAGSKRKINPDEGSRKRARKIKDKDPGEKITVKSKEP 271
           E K+             SGQK QPAGSKRKI  DEG +KRARK KDK+PGEK   KSK+ 
Sbjct: 352 EVKKAAANPKKSPSSKASGQKSQPAGSKRKIELDEGPKKRARKTKDKNPGEKKKAKSKD- 410

Query: 270 XXXXXXXXXXXXXXEFSNASEDSNGSDEDWTA 175
                         EFSNASED   SDEDW A
Sbjct: 411 ----SEVEDDDDIEEFSNASED---SDEDWAA 435


>ref|XP_003533290.1| PREDICTED: DNA-binding protein RHL1-like [Glycine max]
          Length = 421

 Score =  130 bits (328), Expect = 2e-28
 Identities = 76/118 (64%), Positives = 83/118 (70%), Gaps = 7/118 (5%)
 Frame = -2

Query: 630 KKTVVIDIDNEDDAPGDQLPMENKDSASGSNSKKVSQSASATAS-------RGSLVQATI 472
           KKTVV D+D+EDDAP DQ    N +SAS S SK+VSQSASA+AS       RGSLVQATI
Sbjct: 295 KKTVVFDLDDEDDAPVDQPAKINTESASRSKSKEVSQSASASASTEVKSSNRGSLVQATI 354

Query: 471 STLFKKVEEKEXXXXXXXXXXXXXSGQKLQPAGSKRKINPDEGSRKRARKIKDKDPGE 298
           STLFKKVEEK               GQK QPAGSKRKI+ DEGS+KRARK  DKDPGE
Sbjct: 355 STLFKKVEEKTTPRSSRKSPSSKAYGQKSQPAGSKRKIDLDEGSKKRARKTTDKDPGE 412


>ref|XP_003549172.1| PREDICTED: DNA-binding protein RHL1-like [Glycine max]
          Length = 415

 Score =  129 bits (323), Expect = 6e-28
 Identities = 84/160 (52%), Positives = 94/160 (58%), Gaps = 8/160 (5%)
 Frame = -2

Query: 630 KKTVVIDIDNEDDAPGDQLPMENKDSASGSNSKKVSQSASATAS-------RGSLVQATI 472
           KKTVV D+D+EDDAP DQ   +N +SAS S  K+VSQSASA+AS       RGSLVQATI
Sbjct: 286 KKTVVFDLDDEDDAPVDQPAKKNNESASRSKCKEVSQSASASASTEVKSSNRGSLVQATI 345

Query: 471 STLFKKVEEKEXXXXXXXXXXXXXSGQKLQPAGSKRKINPDEGSRKRARKIKDKDPGEKI 292
           STLFKKVEEK                              DEGS+KRARK KDKDPG+KI
Sbjct: 346 STLFKKVEEK------------------------------DEGSKKRARKTKDKDPGKKI 375

Query: 291 TVKS-KEPXXXXXXXXXXXXXXEFSNASEDSNGSDEDWTA 175
             KS K+               EFSNASED+N SDEDWTA
Sbjct: 376 KAKSKKDNVEDDDDDDDGDDIEEFSNASEDTNESDEDWTA 415


>gb|AFK41524.1| unknown [Lotus japonicus]
          Length = 76

 Score = 92.0 bits (227), Expect = 8e-17
 Identities = 49/68 (72%), Positives = 54/68 (79%)
 Frame = +2

Query: 278 LLFTVIFSPGSLSLIFLALFLDPSSGLIFLFDPAGCNFWPEAFDDGDFLELLGASFSSTF 457
           LL ++ FSPGSLSL+FLALFLDPSS  +FLF+P      PEAFDD DF E LGA FSSTF
Sbjct: 14  LLSSLTFSPGSLSLVFLALFLDPSSRSVFLFEPK-----PEAFDDKDFFESLGAFFSSTF 68

Query: 458 LNNVDIVA 481
           LNNVDIVA
Sbjct: 69  LNNVDIVA 76


>ref|XP_004137530.1| PREDICTED: DNA-binding protein RHL1-like [Cucumis sativus]
          Length = 430

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 49/154 (31%), Positives = 73/154 (47%), Gaps = 2/154 (1%)
 Frame = -2

Query: 630 KKTVVIDIDN-EDDAPGDQLP-MENKDSASGSNSKKVSQSASATASRGSLVQATISTLFK 457
           +KT  I +++ ++DA   + P +E   ++     K      SA +    LVQ T+ +LFK
Sbjct: 290 EKTEDISVESIDEDAVKIKPPFLEGNQTSISKEKKSFRAKGSAQSDTRGLVQPTLLSLFK 349

Query: 456 KVEEKEXXXXXXXXXXXXXSGQKLQPAGSKRKINPDEGSRKRARKIKDKDPGEKITVKSK 277
           KVEEK              S QK+Q +GSK+KI+ DEGS+KR R ++ +  G K   K  
Sbjct: 350 KVEEKRTPRSSKRSSAPKVSTQKMQLSGSKQKIDQDEGSKKR-RVVRGQ--GGKAQKKDT 406

Query: 276 EPXXXXXXXXXXXXXXEFSNASEDSNGSDEDWTA 175
           E               E  + S     +DEDWT+
Sbjct: 407 E----------YEVEDEIEDLSSSQEDTDEDWTS 430


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