BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00021418
         (482 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003611862.1| Pentatricopeptide repeat-containing protein ...   253   1e-65
ref|XP_003516589.1| PREDICTED: pentatricopeptide repeat-containi...   231   6e-59
ref|XP_003635090.1| PREDICTED: pentatricopeptide repeat-containi...   170   1e-40
ref|XP_002522388.1| pentatricopeptide repeat-containing protein,...   166   2e-39
emb|CAN61826.1| hypothetical protein VITISV_027628 [Vitis vinifera]   157   8e-37

>ref|XP_003611862.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355513197|gb|AES94820.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 663

 Score =  253 bits (645), Expect = 1e-65
 Identities = 122/142 (85%), Positives = 131/142 (92%)
 Frame = -2

Query: 427 KHGNLDLERFVHLYIVVTGIEIDSIVTNALMDMYAKCGHLQCAKSVFDQMLDKNVVSWTC 248
           KHGN DL RFVHL++VVTGIEIDSIVTNALMDMYAKCG+L+CAKSVFDQMLDK+VVSWTC
Sbjct: 247 KHGNFDLGRFVHLHMVVTGIEIDSIVTNALMDMYAKCGNLKCAKSVFDQMLDKDVVSWTC 306

Query: 247 MISAYANHGLMDHALEIFNQMPVKNVVSWNSIIWSHVQEGLYAEAVELFHSMCVSGVMPN 68
           MI+AYANHGL+D ALE FNQMP KNVVSWNSIIW HVQEGLYAEAV+LF+ MC SGVM N
Sbjct: 307 MINAYANHGLIDCALEFFNQMPGKNVVSWNSIIWCHVQEGLYAEAVDLFYRMCDSGVMAN 366

Query: 67  DATLVGILSSCSHMGDLALGKQ 2
           D TLV ILSSCSHMGDLALGKQ
Sbjct: 367 DTTLVAILSSCSHMGDLALGKQ 388



 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 49/139 (35%), Positives = 67/139 (48%)
 Frame = -2

Query: 421 GNLDLERFVHLYIVVTGIEIDSIVTNALMDMYAKCGHLQCAKSVFDQMLDKNVVSWTCMI 242
           G+L L +  H YI    I + + + NA++DMYAKCG LQ A  VF  M +KN VSW  +I
Sbjct: 381 GDLALGKQAHSYIFDNNITLSATLCNAIIDMYAKCGALQTAMDVFFGMPEKNAVSWNVII 440

Query: 241 SAYANHGLMDHALEIFNQMPVKNVVSWNSIIWSHVQEGLYAEAVELFHSMCVSGVMPNDA 62
            A A HG    A+E+F +M                                 SGV P++ 
Sbjct: 441 GALALHGYGKEAIEMFEKMQ-------------------------------ASGVCPDEI 469

Query: 61  TLVGILSSCSHMGDLALGK 5
           T  G+LS+CSH G +  G+
Sbjct: 470 TFTGLLSACSHSGLVDTGQ 488


>ref|XP_003516589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Glycine max]
          Length = 667

 Score =  231 bits (588), Expect = 6e-59
 Identities = 112/142 (78%), Positives = 126/142 (88%)
 Frame = -2

Query: 427 KHGNLDLERFVHLYIVVTGIEIDSIVTNALMDMYAKCGHLQCAKSVFDQMLDKNVVSWTC 248
           KH NLDL RFVHLYIV+TG+EIDSIVTNAL+DMYAKCGHLQ AK VFDQMLDK+VVSWT 
Sbjct: 250 KHCNLDLGRFVHLYIVITGVEIDSIVTNALIDMYAKCGHLQFAKHVFDQMLDKDVVSWTS 309

Query: 247 MISAYANHGLMDHALEIFNQMPVKNVVSWNSIIWSHVQEGLYAEAVELFHSMCVSGVMPN 68
           M++AYAN GL+++A++IFN MPVKNVVSWNSII   VQEG Y EAVELFH MC+SGVMP+
Sbjct: 310 MVNAYANQGLVENAVQIFNHMPVKNVVSWNSIICCLVQEGQYTEAVELFHRMCISGVMPD 369

Query: 67  DATLVGILSSCSHMGDLALGKQ 2
           DATLV ILS CS+ GDLALGKQ
Sbjct: 370 DATLVSILSCCSNTGDLALGKQ 391



 Score = 82.0 bits (201), Expect = 4e-14
 Identities = 49/139 (35%), Positives = 69/139 (49%)
 Frame = -2

Query: 421 GNLDLERFVHLYIVVTGIEIDSIVTNALMDMYAKCGHLQCAKSVFDQMLDKNVVSWTCMI 242
           G+L L +  H YI    I +   + N+L+DMYAKC                         
Sbjct: 384 GDLALGKQAHCYICDNIITVSVTLCNSLIDMYAKC------------------------- 418

Query: 241 SAYANHGLMDHALEIFNQMPVKNVVSWNSIIWSHVQEGLYAEAVELFHSMCVSGVMPNDA 62
                 G +  A++IF  MP KNVVSWN II +    G   EA+E+F SM  SG+ P++ 
Sbjct: 419 ------GALQTAIDIFFGMPEKNVVSWNVIIGALALHGFGEEAIEMFKSMQASGLYPDEI 472

Query: 61  TLVGILSSCSHMGDLALGK 5
           T  G+LS+CSH G + +G+
Sbjct: 473 TFTGLLSACSHSGLVDMGR 491



 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 24/71 (33%), Positives = 39/71 (54%)
 Frame = -2

Query: 397 VHLYIVVTGIEIDSIVTNALMDMYAKCGHLQCAKSVFDQMLDKNVVSWTCMISAYANHGL 218
           VH   +  G+   + V NA++  Y  C  +  A+ VFD + D+ +VSW  MI+ Y+  G 
Sbjct: 159 VHAQAIKLGMGPHACVQNAILTAYVACRLILSARQVFDDISDRTIVSWNSMIAGYSKMGF 218

Query: 217 MDHALEIFNQM 185
            D A+ +F +M
Sbjct: 219 CDEAILLFQEM 229


>ref|XP_003635090.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 616

 Score =  170 bits (430), Expect = 1e-40
 Identities = 81/139 (58%), Positives = 112/139 (80%)
 Frame = -2

Query: 418 NLDLERFVHLYIVVTGIEIDSIVTNALMDMYAKCGHLQCAKSVFDQMLDKNVVSWTCMIS 239
           +LDL R+VH  I +TG++ID IV NAL+DMYAKCG+L  A+++FD+  +KNVVSWT MIS
Sbjct: 204 DLDLGRYVHFCIEITGVKIDIIVRNALVDMYAKCGNLHSAQAIFDRTQEKNVVSWTSMIS 263

Query: 238 AYANHGLMDHALEIFNQMPVKNVVSWNSIIWSHVQEGLYAEAVELFHSMCVSGVMPNDAT 59
           AYA HG ++ A +IF+QMP KNVVSWNS+I  +++EG Y EA++LF+ M  S V+P++AT
Sbjct: 264 AYAQHGSIEVARQIFDQMPGKNVVSWNSMISCYLREGQYREALDLFNKMRNSRVVPDEAT 323

Query: 58  LVGILSSCSHMGDLALGKQ 2
           LV IL++CS +GDL +GK+
Sbjct: 324 LVSILAACSQLGDLVMGKK 342



 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 44/118 (37%), Positives = 65/118 (55%), Gaps = 7/118 (5%)
 Frame = -2

Query: 340 LMDMYAKC---GHLQCAKSVFDQMLDKN----VVSWTCMISAYANHGLMDHALEIFNQMP 182
           L+ + A C   G L   K + + +L       V  +  +I  YA  G +  AL+IF +MP
Sbjct: 324 LVSILAACSQLGDLVMGKKIHNYILSNKGAYGVTLYNSLIDMYAKCGPVVTALDIFLEMP 383

Query: 181 VKNVVSWNSIIWSHVQEGLYAEAVELFHSMCVSGVMPNDATLVGILSSCSHMGDLALG 8
            KN+VSWN II +    G   EA++LF  M   G +P++ TL G+LS+CSH G + +G
Sbjct: 384 GKNLVSWNVIIGALALHGCGLEAIKLFEEMQADGTLPDEITLTGLLSACSHSGLVDMG 441



 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 43/131 (32%), Positives = 57/131 (43%)
 Frame = -2

Query: 397 VHLYIVVTGIEIDSIVTNALMDMYAKCGHLQCAKSVFDQMLDKNVVSWTCMISAYANHGL 218
           VH   +  GI     V NAL+ +Y  CG + CA+ +FD + DK +VSW  MI  YA+ G 
Sbjct: 110 VHGLAIKLGIGSLVFVQNALIAVYVVCGLIHCARKLFDDITDKTLVSWNSMIGGYAHMG- 168

Query: 217 MDHALEIFNQMPVKNVVSWNSIIWSHVQEGLYAEAVELFHSMCVSGVMPNDATLVGILSS 38
                            +W              EA  LF  M   G+ P+  T V +LS 
Sbjct: 169 -----------------NWK-------------EAFLLFRKMREWGMEPDGFTFVNLLSV 198

Query: 37  CSHMGDLALGK 5
           CS   DL LG+
Sbjct: 199 CSQSRDLDLGR 209


>ref|XP_002522388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223538466|gb|EEF40072.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 472

 Score =  166 bits (419), Expect = 2e-39
 Identities = 80/139 (57%), Positives = 108/139 (77%)
 Frame = -2

Query: 418 NLDLERFVHLYIVVTGIEIDSIVTNALMDMYAKCGHLQCAKSVFDQMLDKNVVSWTCMIS 239
           +++L RFVHLYI +TG++ID +  NAL+DMYAKCG L  A+ VF QM +KNVVSWT MI+
Sbjct: 204 DINLGRFVHLYIQITGMKIDLVARNALIDMYAKCGALVLAERVFQQMPNKNVVSWTSMIT 263

Query: 238 AYANHGLMDHALEIFNQMPVKNVVSWNSIIWSHVQEGLYAEAVELFHSMCVSGVMPNDAT 59
           AYA  GL+++A + F+QMP KNVVSWNS+I S+VQ G   EA++LFH M    V+PN+AT
Sbjct: 264 AYAKQGLVEYARKSFDQMPEKNVVSWNSMISSYVQGGQCREALDLFHEMHSFRVVPNEAT 323

Query: 58  LVGILSSCSHMGDLALGKQ 2
           L+ +LS+C  +GDL +GK+
Sbjct: 324 LLSVLSACGQIGDLVMGKK 342



 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 48/133 (36%), Positives = 68/133 (51%)
 Frame = -2

Query: 421 GNLDLERFVHLYIVVTGIEIDSIVTNALMDMYAKCGHLQCAKSVFDQMLDKNVVSWTCMI 242
           G+L + + +H YI  T       + N+L+DMYAKCG L+ A                   
Sbjct: 335 GDLVMGKKIHNYICGTSSMYSVTLCNSLIDMYAKCGALRIA------------------- 375

Query: 241 SAYANHGLMDHALEIFNQMPVKNVVSWNSIIWSHVQEGLYAEAVELFHSMCVSGVMPNDA 62
                       +++FN+MP KN+VSWN II +    G   EAVELF  M  +GV P++ 
Sbjct: 376 ------------IDVFNEMPNKNLVSWNVIIGALALHGYGVEAVELFRKMQAAGVWPDEI 423

Query: 61  TLVGILSSCSHMG 23
           T +G+LS+CSH G
Sbjct: 424 TFMGLLSACSHSG 436


>emb|CAN61826.1| hypothetical protein VITISV_027628 [Vitis vinifera]
          Length = 688

 Score =  157 bits (397), Expect = 8e-37
 Identities = 75/128 (58%), Positives = 103/128 (80%)
 Frame = -2

Query: 385 IVVTGIEIDSIVTNALMDMYAKCGHLQCAKSVFDQMLDKNVVSWTCMISAYANHGLMDHA 206
           I +TG++ID IV NAL DMYAKCG+L  A+++FD+  +KNVVSWT MISAYA HG ++ A
Sbjct: 287 IEITGVKIDIIVRNALXDMYAKCGNLHSAQAIFDRTQEKNVVSWTSMISAYAQHGSIEVA 346

Query: 205 LEIFNQMPVKNVVSWNSIIWSHVQEGLYAEAVELFHSMCVSGVMPNDATLVGILSSCSHM 26
            +IF+QMP KNVVSWNS+I  +++EG Y EA++LF+ M  S V+P++ATLV IL++CS +
Sbjct: 347 RQIFDQMPGKNVVSWNSMISCYLREGQYREALDLFNKMRNSRVVPDEATLVSILAACSQL 406

Query: 25  GDLALGKQ 2
           GDL +GK+
Sbjct: 407 GDLVMGKK 414



 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 44/118 (37%), Positives = 65/118 (55%), Gaps = 7/118 (5%)
 Frame = -2

Query: 340 LMDMYAKC---GHLQCAKSVFDQMLDKN----VVSWTCMISAYANHGLMDHALEIFNQMP 182
           L+ + A C   G L   K + + +L       V  +  +I  YA  G +  AL+IF +MP
Sbjct: 396 LVSILAACSQLGDLVMGKKIHNYILSNKGAYGVTLYNSLIDMYAKCGPVVTALDIFLEMP 455

Query: 181 VKNVVSWNSIIWSHVQEGLYAEAVELFHSMCVSGVMPNDATLVGILSSCSHMGDLALG 8
            KN+VSWN II +    G   EA++LF  M   G +P++ TL G+LS+CSH G + +G
Sbjct: 456 GKNLVSWNVIIGALALHGCGLEAIKLFEEMQADGTLPDEITLTGLLSACSHSGLVDMG 513