BLASTX nr result

ID: Glycyrrhiza24_contig00021409 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00021409
         (499 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003528235.1| PREDICTED: cleavage stimulation factor subun...   259   2e-67
ref|XP_002514630.1| Cleavage stimulation factor 50 kDa subunit, ...   239   2e-61
ref|XP_002265349.2| PREDICTED: cleavage stimulation factor subun...   236   1e-60
emb|CBI15329.3| unnamed protein product [Vitis vinifera]              236   1e-60
ref|XP_004137447.1| PREDICTED: LOW QUALITY PROTEIN: cleavage sti...   236   2e-60

>ref|XP_003528235.1| PREDICTED: cleavage stimulation factor subunit 1-like [Glycine max]
          Length = 425

 Score =  259 bits (662), Expect = 2e-67
 Identities = 121/132 (91%), Positives = 130/132 (98%)
 Frame = -3

Query: 497 ADCVRSITGAHGTAEATSAVFTRDERFVLSCGKDSTIKLWEVGSGRLVKQYLGAIHTQLR 318
           A+CVRSIT AHGTAEATSA+FT+D+RFVLSCGKDST+KLWEVGSGRLVKQYLGAIHTQLR
Sbjct: 294 ANCVRSITAAHGTAEATSAIFTKDQRFVLSCGKDSTLKLWEVGSGRLVKQYLGAIHTQLR 353

Query: 317 CQAIFNETEEFILSIDELNNEVVIWDAMTTEKVAKWPSNHVGAPRWLEHSPTESAFISCG 138
           CQAIFNETEEFILSIDEL+NE+VIWDAMTTEKVAKWPSNHVGAPRWLEHSP ESAFISCG
Sbjct: 354 CQAIFNETEEFILSIDELSNEIVIWDAMTTEKVAKWPSNHVGAPRWLEHSPIESAFISCG 413

Query: 137 SDRSVRFWKETL 102
           +DRSVRFWKET+
Sbjct: 414 TDRSVRFWKETV 425


>ref|XP_002514630.1| Cleavage stimulation factor 50 kDa subunit, putative [Ricinus
           communis] gi|223546234|gb|EEF47736.1| Cleavage
           stimulation factor 50 kDa subunit, putative [Ricinus
           communis]
          Length = 435

 Score =  239 bits (609), Expect = 2e-61
 Identities = 105/131 (80%), Positives = 124/131 (94%)
 Frame = -3

Query: 497 ADCVRSITGAHGTAEATSAVFTRDERFVLSCGKDSTIKLWEVGSGRLVKQYLGAIHTQLR 318
           A+C+RSI GAHGTAE+TSA FT+D+RFVLSCGKDS+IKLWEVGSGRLVKQY+GA HTQLR
Sbjct: 304 ANCIRSIVGAHGTAESTSATFTKDQRFVLSCGKDSSIKLWEVGSGRLVKQYIGATHTQLR 363

Query: 317 CQAIFNETEEFILSIDELNNEVVIWDAMTTEKVAKWPSNHVGAPRWLEHSPTESAFISCG 138
           CQA+FNETEEF++SIDE +NE++IWDA+T EKVA+WPSNH GAPRW+EHSP E+AFISCG
Sbjct: 364 CQAVFNETEEFVISIDEPSNEIIIWDALTAEKVARWPSNHNGAPRWIEHSPVEAAFISCG 423

Query: 137 SDRSVRFWKET 105
           +DRSVRFWK+T
Sbjct: 424 TDRSVRFWKDT 434


>ref|XP_002265349.2| PREDICTED: cleavage stimulation factor subunit 1-like [Vitis
           vinifera]
          Length = 440

 Score =  236 bits (603), Expect = 1e-60
 Identities = 106/132 (80%), Positives = 124/132 (93%)
 Frame = -3

Query: 497 ADCVRSITGAHGTAEATSAVFTRDERFVLSCGKDSTIKLWEVGSGRLVKQYLGAIHTQLR 318
           A+CVRSI GAHGTAEATSA FT+D+RFVLSCGKDS++KLWE+GSG+LVKQYLGA HTQLR
Sbjct: 309 ANCVRSIVGAHGTAEATSASFTKDQRFVLSCGKDSSVKLWEIGSGKLVKQYLGAAHTQLR 368

Query: 317 CQAIFNETEEFILSIDELNNEVVIWDAMTTEKVAKWPSNHVGAPRWLEHSPTESAFISCG 138
           CQA+FNETEEF+LSIDE +NE+V+WDA+T E VA+ PSNH+GAPRWLEHSPTE+AF+SCG
Sbjct: 369 CQAVFNETEEFVLSIDEQSNEIVVWDALTAEIVARLPSNHIGAPRWLEHSPTEAAFVSCG 428

Query: 137 SDRSVRFWKETL 102
           +DRSVRFWKE L
Sbjct: 429 TDRSVRFWKEIL 440


>emb|CBI15329.3| unnamed protein product [Vitis vinifera]
          Length = 484

 Score =  236 bits (603), Expect = 1e-60
 Identities = 106/132 (80%), Positives = 124/132 (93%)
 Frame = -3

Query: 497 ADCVRSITGAHGTAEATSAVFTRDERFVLSCGKDSTIKLWEVGSGRLVKQYLGAIHTQLR 318
           A+CVRSI GAHGTAEATSA FT+D+RFVLSCGKDS++KLWE+GSG+LVKQYLGA HTQLR
Sbjct: 353 ANCVRSIVGAHGTAEATSASFTKDQRFVLSCGKDSSVKLWEIGSGKLVKQYLGAAHTQLR 412

Query: 317 CQAIFNETEEFILSIDELNNEVVIWDAMTTEKVAKWPSNHVGAPRWLEHSPTESAFISCG 138
           CQA+FNETEEF+LSIDE +NE+V+WDA+T E VA+ PSNH+GAPRWLEHSPTE+AF+SCG
Sbjct: 413 CQAVFNETEEFVLSIDEQSNEIVVWDALTAEIVARLPSNHIGAPRWLEHSPTEAAFVSCG 472

Query: 137 SDRSVRFWKETL 102
           +DRSVRFWKE L
Sbjct: 473 TDRSVRFWKEIL 484


>ref|XP_004137447.1| PREDICTED: LOW QUALITY PROTEIN: cleavage stimulation factor subunit
           1-like [Cucumis sativus]
          Length = 435

 Score =  236 bits (601), Expect = 2e-60
 Identities = 104/132 (78%), Positives = 124/132 (93%)
 Frame = -3

Query: 497 ADCVRSITGAHGTAEATSAVFTRDERFVLSCGKDSTIKLWEVGSGRLVKQYLGAIHTQLR 318
           A C+RSI  AHGTAEATSA FT+DER+VLSCGKDS++KLW+VG+GRLVKQY+GA H QLR
Sbjct: 304 AKCIRSIVSAHGTAEATSAKFTKDERYVLSCGKDSSVKLWDVGTGRLVKQYVGATHIQLR 363

Query: 317 CQAIFNETEEFILSIDELNNEVVIWDAMTTEKVAKWPSNHVGAPRWLEHSPTESAFISCG 138
           CQA+FN+TEEF+LSIDE +NE+VIWDA+T E+VA+WPSNHVGAPRWLEHSPTESAFISCG
Sbjct: 364 CQAVFNDTEEFVLSIDEPSNEIVIWDALTAERVARWPSNHVGAPRWLEHSPTESAFISCG 423

Query: 137 SDRSVRFWKETL 102
           +D+S+RFWKE+L
Sbjct: 424 TDKSIRFWKESL 435


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