BLASTX nr result

ID: Glycyrrhiza24_contig00021398 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00021398
         (320 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003530239.1| PREDICTED: uncharacterized protein LOC100786...   139   3e-31
gb|ACU23932.1| unknown [Glycine max]                                  139   3e-31
ref|XP_003551515.1| PREDICTED: uncharacterized protein LOC100795...   135   3e-30
gb|ABK94774.1| unknown [Populus trichocarpa]                          115   5e-24
ref|XP_002322933.1| predicted protein [Populus trichocarpa] gi|2...   105   3e-21

>ref|XP_003530239.1| PREDICTED: uncharacterized protein LOC100786732 [Glycine max]
          Length = 396

 Score =  139 bits (349), Expect = 3e-31
 Identities = 71/96 (73%), Positives = 76/96 (79%), Gaps = 1/96 (1%)
 Frame = +3

Query: 18  SVGRFVSGSPQSTLCAFGSGCGCRKGSSHGSPNGACKLSSERATWDLLHAAAGEVERMRL 197
           SVGRFVSGSPQSTLCAFGSGC C KGSS GSP+G CKLSS + TWDLLHAAAGEVERMRL
Sbjct: 86  SVGRFVSGSPQSTLCAFGSGCSCGKGSSQGSPDGVCKLSSAKTTWDLLHAAAGEVERMRL 145

Query: 198 SQQEGCYGFGYQSHNGGPFVVPQRKPSPI-TLPSKN 302
            Q+    G+    HNG    VPQRKPSP+ TLPSKN
Sbjct: 146 KQE----GYALNHHNGN--FVPQRKPSPVTTLPSKN 175


>gb|ACU23932.1| unknown [Glycine max]
          Length = 360

 Score =  139 bits (349), Expect = 3e-31
 Identities = 71/96 (73%), Positives = 76/96 (79%), Gaps = 1/96 (1%)
 Frame = +3

Query: 18  SVGRFVSGSPQSTLCAFGSGCGCRKGSSHGSPNGACKLSSERATWDLLHAAAGEVERMRL 197
           SVGRFVSGSPQSTLCAFGSGC C KGSS GSP+G CKLSS + TWDLLHAAAGEVERMRL
Sbjct: 86  SVGRFVSGSPQSTLCAFGSGCSCGKGSSQGSPDGVCKLSSAKTTWDLLHAAAGEVERMRL 145

Query: 198 SQQEGCYGFGYQSHNGGPFVVPQRKPSPI-TLPSKN 302
            Q+    G+    HNG    VPQRKPSP+ TLPSKN
Sbjct: 146 KQE----GYALNHHNGN--FVPQRKPSPVTTLPSKN 175


>ref|XP_003551515.1| PREDICTED: uncharacterized protein LOC100795977 [Glycine max]
          Length = 484

 Score =  135 bits (340), Expect = 3e-30
 Identities = 72/105 (68%), Positives = 81/105 (77%), Gaps = 1/105 (0%)
 Frame = +3

Query: 3   KSHDTSVGRFVSGSPQSTLCAFGSGCGCRKGSSHGSPNGACKLSSERATWDLLHAAAGEV 182
           +S   S GRFVS SPQSTLCAFGSGCGC KGSS GSP+G CKLSS + TWDLLHAAAGEV
Sbjct: 83  QSDTKSAGRFVSSSPQSTLCAFGSGCGCGKGSSQGSPDGVCKLSSAKTTWDLLHAAAGEV 142

Query: 183 ERMRLSQQEGCYGFGYQSHNGGPFVVPQRKPSP-ITLPSKNNNTT 314
           ERMRL +QEG Y F +Q+ N    ++PQRKPSP I LPSK   +T
Sbjct: 143 ERMRL-KQEG-YAFNHQNGN----LIPQRKPSPVIPLPSKTTTST 181


>gb|ABK94774.1| unknown [Populus trichocarpa]
          Length = 405

 Score =  115 bits (287), Expect = 5e-24
 Identities = 61/100 (61%), Positives = 73/100 (73%)
 Frame = +3

Query: 12  DTSVGRFVSGSPQSTLCAFGSGCGCRKGSSHGSPNGACKLSSERATWDLLHAAAGEVERM 191
           + S G  VSGSPQSTLCA GSGCGC +GSS GSP+G    SS  ATWDLL+AAAGEVERM
Sbjct: 93  EKSKGWVVSGSPQSTLCAVGSGCGCGQGSSRGSPSG----SSPPATWDLLYAAAGEVERM 148

Query: 192 RLSQQEGCYGFGYQSHNGGPFVVPQRKPSPITLPSKNNNT 311
           R++ +EGC GF  QS      + P RKPSP+++P KN N+
Sbjct: 149 RMNNEEGC-GFNNQSRG---LLGPPRKPSPVSIPLKNPNS 184


>ref|XP_002322933.1| predicted protein [Populus trichocarpa] gi|222867563|gb|EEF04694.1|
           predicted protein [Populus trichocarpa]
          Length = 229

 Score =  105 bits (263), Expect = 3e-21
 Identities = 57/93 (61%), Positives = 66/93 (70%)
 Frame = +3

Query: 24  GRFVSGSPQSTLCAFGSGCGCRKGSSHGSPNGACKLSSERATWDLLHAAAGEVERMRLSQ 203
           G  +SGSPQSTLCA GS CGCR+GSS GSPNG    SS  ATWDLL+ AAGEVERM+++ 
Sbjct: 122 GWVLSGSPQSTLCAVGSRCGCRQGSSRGSPNG----SSPPATWDLLYEAAGEVERMKMNN 177

Query: 204 QEGCYGFGYQSHNGGPFVVPQRKPSPITLPSKN 302
           +EGC  F  QS        P RKP PI++PSKN
Sbjct: 178 EEGCC-FNSQSRG---LSGPPRKPPPISIPSKN 206


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