BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00021387
         (363 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003535324.1| PREDICTED: pentatricopeptide repeat-containi...   199   3e-49
ref|XP_003591206.1| Pentatricopeptide repeat-containing protein ...   193   1e-47
emb|CBI39579.3| unnamed protein product [Vitis vinifera]              183   1e-44
ref|XP_002278152.1| PREDICTED: pentatricopeptide repeat-containi...   183   1e-44
ref|XP_002330193.1| predicted protein [Populus trichocarpa] gi|2...   154   9e-36

>ref|XP_003535324.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09190-like [Glycine max]
          Length = 483

 Score =  199 bits (505), Expect = 3e-49
 Identities = 92/115 (80%), Positives = 105/115 (91%)
 Frame = +2

Query: 2   KDEKALDLFNEMLGQGFEPDDATLVTVLPVCARLGAVDAGEWIHSCASDKGFLREAVAVG 181
           K+EKAL+LFNEML QGFEPDDA+LVTVLPVCARLGAVD GEWIHS A+ KGFL++ + VG
Sbjct: 218 KEEKALELFNEMLEQGFEPDDASLVTVLPVCARLGAVDIGEWIHSYANSKGFLQDTINVG 277

Query: 182 NSLLDFYCKCGNLEAAWSIFNEMPSKNVVTWNAMISGLGYNGKGELGAELFEEMV 346
           NSL+DFYCKCGNL+AAWSIFN+M SKNVV+WNAMISGL YNG+GE+G  LFEEMV
Sbjct: 278 NSLVDFYCKCGNLQAAWSIFNDMASKNVVSWNAMISGLAYNGEGEVGVNLFEEMV 332



 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 37/115 (32%), Positives = 58/115 (50%), Gaps = 1/115 (0%)
 Frame = +2

Query: 8   EKALDLFNEMLGQGFEPDDATLVTVLPVCARLGAVDAGEWIHSCASDKGFLREAVAVGNS 187
           E  ++LF EM+  GFEP+D+T V VL  CA +G VD G  + +  S K  +   +     
Sbjct: 322 EVGVNLFEEMVHGGFEPNDSTFVGVLACCAHVGLVDRGRDLFASMSVKFKVSPKLEHYGC 381

Query: 188 LLDFYCKCGNLEAAWSIFNEMPSK-NVVTWNAMISGLGYNGKGELGAELFEEMVR 349
           ++D   +CG++  A  +   MP K     W A++S     G  E+     +E+VR
Sbjct: 382 VVDLLGRCGHVREARDLITSMPLKPTAALWGALLSACRTYGDREIAENAAKELVR 436



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 38/143 (26%), Positives = 57/143 (39%), Gaps = 30/143 (20%)
 Frame = +2

Query: 14  ALDLFNEMLGQGFEPDDATLVTVLPVCARLGAVDAGEWIHSCASDKGFLREA-------- 169
           +   F+ M  +   PD+ TL  +    + L     G  +H+     GF R A        
Sbjct: 90  SFSFFSLMKTRAISPDEYTLAPLFKSASNLRYYVLGGCVHAHVVRLGFTRHASVRVAALE 149

Query: 170 ----------------------VAVGNSLLDFYCKCGNLEAAWSIFNEMPSKNVVTWNAM 283
                                 V V N ++  +CK G+LE    +F +M  + VV+WN M
Sbjct: 150 VYASCERMGDASKVFDEMRDPDVVVWNLMIRGFCKMGDLETGMKVFGQMKERTVVSWNLM 209

Query: 284 ISGLGYNGKGELGAELFEEMVRE 352
           +S L  N K E   ELF EM+ +
Sbjct: 210 MSCLAKNNKEEKALELFNEMLEQ 232


>ref|XP_003591206.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355480254|gb|AES61457.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 490

 Score =  193 bits (491), Expect = 1e-47
 Identities = 93/120 (77%), Positives = 102/120 (85%)
 Frame = +2

Query: 2   KDEKALDLFNEMLGQGFEPDDATLVTVLPVCARLGAVDAGEWIHSCASDKGFLREAVAVG 181
           KD +A  +F EML QGFEPDDATLVTVLPVCARLG VDAGEWIHS A  KG LR+ ++VG
Sbjct: 220 KDGEAFGIFREMLEQGFEPDDATLVTVLPVCARLGDVDAGEWIHSYADGKGLLRKVISVG 279

Query: 182 NSLLDFYCKCGNLEAAWSIFNEMPSKNVVTWNAMISGLGYNGKGELGAELFEEMVREKGV 361
           NSL+DFYCKCGNLEAAW +FNEM  KNVV+WNAMISGLG NGKGELG ELFE+M R KGV
Sbjct: 280 NSLVDFYCKCGNLEAAWKVFNEMTKKNVVSWNAMISGLGLNGKGELGVELFEKMAR-KGV 338



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 36/97 (37%), Positives = 54/97 (55%), Gaps = 1/97 (1%)
 Frame = +2

Query: 56  PDDATLVTVLPVCARLGAVDAGEWIHSCASDKGFLREA-VAVGNSLLDFYCKCGNLEAAW 232
           PD+ T   +L   + L   D G+ +H+  +  GF R + V +G  LL+ Y  CG +E A 
Sbjct: 106 PDNFTFPPLLKATSYLRDYDLGQCLHAHVTALGFYRHSPVEIG--LLEVYSNCGKMEDAN 163

Query: 233 SIFNEMPSKNVVTWNAMISGLGYNGKGELGAELFEEM 343
            +F+EM  + VV WN MI+G    G  E+G +LF+ M
Sbjct: 164 KVFDEMLHREVVVWNIMINGFCKMGDLEIGLKLFKRM 200



 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 36/117 (30%), Positives = 57/117 (48%), Gaps = 1/117 (0%)
 Frame = +2

Query: 2   KDEKALDLFNEMLGQGFEPDDATLVTVLPVCARLGAVDAGEWIHSCASDKGFLREAVAVG 181
           K E  ++LF +M  +G  P D+T V VL  CA  G VD G  I    + K  L   +   
Sbjct: 322 KGELGVELFEKMARKGVTPSDSTFVGVLACCAHAGFVDKGREIFDSMTVKFKLSPKLEHY 381

Query: 182 NSLLDFYCKCGNLEAAWSIFNEMP-SKNVVTWNAMISGLGYNGKGELGAELFEEMVR 349
             ++D   +CG+++ A+ +   MP   N   W A++S    +G  E+     +E+VR
Sbjct: 382 GCVVDLLGRCGHVKEAYDLIRNMPLMPNAALWGALLSACRTHGDREVAEIAAKELVR 438


>emb|CBI39579.3| unnamed protein product [Vitis vinifera]
          Length = 459

 Score =  183 bits (465), Expect = 1e-44
 Identities = 86/120 (71%), Positives = 100/120 (83%)
 Frame = +2

Query: 2   KDEKALDLFNEMLGQGFEPDDATLVTVLPVCARLGAVDAGEWIHSCASDKGFLREAVAVG 181
           +D +AL+LF EM   GFEPDDAT+VT+LPVCARLGAVD GEWIHS A     LR+ ++VG
Sbjct: 193 RDGEALELFREMWDHGFEPDDATVVTILPVCARLGAVDVGEWIHSYAESSRLLRDFISVG 252

Query: 182 NSLLDFYCKCGNLEAAWSIFNEMPSKNVVTWNAMISGLGYNGKGELGAELFEEMVREKGV 361
           NSL+DFYCKCG LE AW +FNEMP KNVV+WNAMISGL +NGKGELGA+LFEEM+  KGV
Sbjct: 253 NSLVDFYCKCGILETAWRVFNEMPQKNVVSWNAMISGLTFNGKGELGADLFEEMI-NKGV 311



 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 40/118 (33%), Positives = 65/118 (55%), Gaps = 6/118 (5%)
 Frame = +2

Query: 8   EKALDLFNEMLGQGFEPDDATLVTVLPVCARLGAVDAGEWIHSCASDKGFLR-EAVAVGN 184
           E +L LF++M  +G  PD+ T   +L  C+ +     G+ +H      GF R  ++ +G 
Sbjct: 89  ENSLLLFSQMKNRGIWPDEFTFAPLLKSCSGICDNRIGKGVHGVVIVVGFERFSSIRIG- 147

Query: 185 SLLDFYCKCGNLEAAWSIFNEM-----PSKNVVTWNAMISGLGYNGKGELGAELFEEM 343
            ++D Y  CG +E A  +F+EM       ++VV+WN+MI+GL  +G+     ELF EM
Sbjct: 148 -IIDLYTSCGRMEDAKKVFDEMLDRDMRDRSVVSWNSMIAGLEQSGRDGEALELFREM 204


>ref|XP_002278152.1| PREDICTED: pentatricopeptide repeat-containing protein At1g09190
           [Vitis vinifera]
          Length = 485

 Score =  183 bits (465), Expect = 1e-44
 Identities = 86/120 (71%), Positives = 100/120 (83%)
 Frame = +2

Query: 2   KDEKALDLFNEMLGQGFEPDDATLVTVLPVCARLGAVDAGEWIHSCASDKGFLREAVAVG 181
           +D +AL+LF EM   GFEPDDAT+VT+LPVCARLGAVD GEWIHS A     LR+ ++VG
Sbjct: 219 RDGEALELFREMWDHGFEPDDATVVTILPVCARLGAVDVGEWIHSYAESSRLLRDFISVG 278

Query: 182 NSLLDFYCKCGNLEAAWSIFNEMPSKNVVTWNAMISGLGYNGKGELGAELFEEMVREKGV 361
           NSL+DFYCKCG LE AW +FNEMP KNVV+WNAMISGL +NGKGELGA+LFEEM+  KGV
Sbjct: 279 NSLVDFYCKCGILETAWRVFNEMPQKNVVSWNAMISGLTFNGKGELGADLFEEMI-NKGV 337


>ref|XP_002330193.1| predicted protein [Populus trichocarpa] gi|222871649|gb|EEF08780.1|
           predicted protein [Populus trichocarpa]
          Length = 485

 Score =  154 bits (388), Expect = 9e-36
 Identities = 71/117 (60%), Positives = 90/117 (76%)
 Frame = +2

Query: 2   KDEKALDLFNEMLGQGFEPDDATLVTVLPVCARLGAVDAGEWIHSCASDKGFLREAVAVG 181
           +D +AL LF++ML  GF+PD+AT+VTVLP+CARLG+VD G+WIHS A   G  R+ VAVG
Sbjct: 219 RDSEALGLFHDMLDWGFKPDEATVVTVLPICARLGSVDVGKWIHSYAKSSGLYRDFVAVG 278

Query: 182 NSLLDFYCKCGNLEAAWSIFNEMPSKNVVTWNAMISGLGYNGKGELGAELFEEMVRE 352
           N+L+DFY K G  E A  +F+EMP KNV++WN +ISGL  NG GELG EL EEM+ E
Sbjct: 279 NALVDFYNKSGMFETARRVFDEMPRKNVISWNTLISGLALNGNGELGVELLEEMMNE 335



 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 38/113 (33%), Positives = 62/113 (54%), Gaps = 1/113 (0%)
 Frame = +2

Query: 8   EKALDLFNEMLGQGFEPDDATLVTVLPVCARLGAVDAGEWIHSCASDKGFLR-EAVAVGN 184
           E++  LF+ M  +G  PD+ TL  +L  C+ LG +  G+ +H      GF    A+ +G 
Sbjct: 89  EESFRLFSSMKNRGIWPDEYTLAPLLKACSSLGVLQLGKCMHKEVLVVGFEGFSAIRIG- 147

Query: 185 SLLDFYCKCGNLEAAWSIFNEMPSKNVVTWNAMISGLGYNGKGELGAELFEEM 343
            +++ Y  CG +E A  +F+EM  ++V+ WN MI G    G  ++G  LF +M
Sbjct: 148 -VIELYSSCGVMEDAEKVFDEMYQRDVIVWNLMIHGFCKRGDVDMGLCLFRQM 199