BLASTX nr result

ID: Glycyrrhiza24_contig00021383 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00021383
         (319 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003595205.1| RecA [Medicago truncatula] gi|355484253|gb|A...   181   4e-44
ref|XP_003534925.1| PREDICTED: DNA repair protein recA homolog 3...   172   2e-41
ref|XP_003547477.1| PREDICTED: DNA repair protein recA homolog 3...   171   7e-41
ref|XP_002330492.1| predicted protein [Populus trichocarpa] gi|2...   150   8e-35
ref|XP_002308284.1| predicted protein [Populus trichocarpa] gi|2...   148   5e-34

>ref|XP_003595205.1| RecA [Medicago truncatula] gi|355484253|gb|AES65456.1| RecA
           [Medicago truncatula]
          Length = 424

 Score =  181 bits (460), Expect = 4e-44
 Identities = 88/104 (84%), Positives = 97/104 (93%)
 Frame = -1

Query: 319 FVKKGEETLGSQVLVKVVKNKLAPPFKTAQFELEFGKGICREAELIELSVKHKLIRKNGS 140
           FVKKGEET+GSQVLVKVVKNK APPFKTAQFELEFGKGICREAE+IELS+KHK I+K+GS
Sbjct: 291 FVKKGEETVGSQVLVKVVKNKHAPPFKTAQFELEFGKGICREAEIIELSIKHKFIKKSGS 350

Query: 139 FYEYNGRNYHGKDALKRFLATGDVVQELTTKLREKLLNADTETV 8
           FYEYNG+NYHGKDALK  L  GD +Q+LTTKLREKLLNA+TETV
Sbjct: 351 FYEYNGKNYHGKDALKSHLINGDGLQDLTTKLREKLLNAETETV 394


>ref|XP_003534925.1| PREDICTED: DNA repair protein recA homolog 3, mitochondrial-like
           [Glycine max]
          Length = 432

 Score =  172 bits (437), Expect = 2e-41
 Identities = 85/105 (80%), Positives = 96/105 (91%)
 Frame = -1

Query: 319 FVKKGEETLGSQVLVKVVKNKLAPPFKTAQFELEFGKGICREAELIELSVKHKLIRKNGS 140
           FVKKGEETLGSQVLVKVVKNK APPFKTAQFE+EFGKGI REAE+IELSVK+K+I+K+GS
Sbjct: 291 FVKKGEETLGSQVLVKVVKNKHAPPFKTAQFEIEFGKGISREAEIIELSVKYKIIKKSGS 350

Query: 139 FYEYNGRNYHGKDALKRFLATGDVVQELTTKLREKLLNADTETVP 5
           F+EYNGRN+HGKDALKRFLA  D VQEL TKLREK+L+A+ E  P
Sbjct: 351 FFEYNGRNFHGKDALKRFLAESDGVQELATKLREKILDAEPELEP 395


>ref|XP_003547477.1| PREDICTED: DNA repair protein recA homolog 3, mitochondrial-like
           [Glycine max]
          Length = 423

 Score =  171 bits (432), Expect = 7e-41
 Identities = 84/102 (82%), Positives = 94/102 (92%)
 Frame = -1

Query: 319 FVKKGEETLGSQVLVKVVKNKLAPPFKTAQFELEFGKGICREAELIELSVKHKLIRKNGS 140
           FVKKGEETLGSQVLVKVVKNK APPFKTAQFE+EFGKGI REAE+IELSVK+K+I+K+GS
Sbjct: 284 FVKKGEETLGSQVLVKVVKNKHAPPFKTAQFEIEFGKGISREAEIIELSVKYKIIKKSGS 343

Query: 139 FYEYNGRNYHGKDALKRFLATGDVVQELTTKLREKLLNADTE 14
           F+EYNGRN+HGKDALKRFLA  D VQEL T LREK+LNA+ E
Sbjct: 344 FFEYNGRNFHGKDALKRFLAESDGVQELATMLREKILNAEPE 385


>ref|XP_002330492.1| predicted protein [Populus trichocarpa] gi|222872426|gb|EEF09557.1|
           predicted protein [Populus trichocarpa]
          Length = 357

 Score =  150 bits (380), Expect = 8e-35
 Identities = 74/103 (71%), Positives = 87/103 (84%), Gaps = 1/103 (0%)
 Frame = -1

Query: 319 FVKKGEETLGSQVLVKVVKNKLAPPFKTAQFELEFGKGICREAELIELSVKHKLIRKNGS 140
           F+KKGEET G+QV VK+ KNKLAPPFKT QFELEFGKGI RE+E+IEL+VKHK I+KNG+
Sbjct: 230 FIKKGEETTGTQVQVKIAKNKLAPPFKTVQFELEFGKGISRESEIIELAVKHKFIKKNGA 289

Query: 139 FYEYNGRNYHGKDALKRFLATGDVVQ-ELTTKLREKLLNADTE 14
           FY+ NGR YHGK+AL+ FLA  D VQ EL  KLREKLL A+T+
Sbjct: 290 FYDCNGRKYHGKEALREFLAHNDDVQEELMMKLREKLLEAETD 332


>ref|XP_002308284.1| predicted protein [Populus trichocarpa] gi|222854260|gb|EEE91807.1|
           predicted protein [Populus trichocarpa]
          Length = 418

 Score =  148 bits (373), Expect = 5e-34
 Identities = 73/102 (71%), Positives = 86/102 (84%), Gaps = 1/102 (0%)
 Frame = -1

Query: 319 FVKKGEETLGSQVLVKVVKNKLAPPFKTAQFELEFGKGICREAELIELSVKHKLIRKNGS 140
           F+KKGEET G+QV VK+VKNKLAPPFKT QFELEFGKGI RE+E+IEL++KHKLI+K+GS
Sbjct: 285 FIKKGEETTGTQVQVKIVKNKLAPPFKTVQFELEFGKGISRESEIIELALKHKLIKKSGS 344

Query: 139 FYEYNGRNYHGKDALKRFLATGDVVQ-ELTTKLREKLLNADT 17
           FY+ NG+ YHGK+A K FLA  D VQ EL  KLREKLL  +T
Sbjct: 345 FYDCNGKKYHGKEAFKEFLAHNDDVQEELMMKLREKLLEGET 386


Top