BLASTX nr result

ID: Glycyrrhiza24_contig00021359 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00021359
         (351 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003593180.1| ATP-dependent DNA helicase PIF1 [Medicago tr...   142   1e-34
ref|XP_003605676.1| ATP-dependent DNA helicase PIF1 [Medicago tr...   140   2e-33
ref|XP_003599985.1| ATP-dependent DNA helicase PIF1 [Medicago tr...   140   2e-33
ref|XP_003600273.1| ATP-dependent DNA helicase PIF1 [Medicago tr...   140   1e-32
ref|XP_003595507.1| ATP-dependent DNA helicase PIF1 [Medicago tr...   123   4e-29

>ref|XP_003593180.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
            gi|355482228|gb|AES63431.1| ATP-dependent DNA helicase
            PIF1 [Medicago truncatula]
          Length = 1626

 Score =  142 bits (358), Expect(2) = 1e-34
 Identities = 71/90 (78%), Positives = 75/90 (83%)
 Frame = -3

Query: 271  LQVNDLGKNIITTTVFTGKNIGDRTLIPRMDLVLSDPSFPFKFQRRQFPLCLCFGITIVL 92
            LQVN LGKNIIT TV TGK+IG + LIPRMDLV SD  FPFKF RRQFP+ LCF +TI  
Sbjct: 1504 LQVNHLGKNIITATVITGKSIGQKVLIPRMDLVPSDSGFPFKFSRRQFPVSLCFAMTINK 1563

Query: 91   GQGQSLLKVGLYLPRPVFTHGQLYVAVSRV 2
             QGQSL KVGLYLPRPVFTHGQLYVAVSRV
Sbjct: 1564 SQGQSLSKVGLYLPRPVFTHGQLYVAVSRV 1593



 Score = 28.9 bits (63), Expect(2) = 1e-34
 Identities = 11/13 (84%), Positives = 12/13 (92%)
 Frame = -2

Query: 311  MRNIDQANSLCNG 273
            +RNIDQAN LCNG
Sbjct: 1489 LRNIDQANGLCNG 1501


>ref|XP_003605676.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
            gi|355506731|gb|AES87873.1| ATP-dependent DNA helicase
            PIF1 [Medicago truncatula]
          Length = 1561

 Score =  140 bits (353), Expect(2) = 2e-33
 Identities = 67/90 (74%), Positives = 74/90 (82%)
 Frame = -3

Query: 271  LQVNDLGKNIITTTVFTGKNIGDRTLIPRMDLVLSDPSFPFKFQRRQFPLCLCFGITIVL 92
            LQV +LGKNIIT TV TGKNIG+   IPRMDLV +D   PFKF RRQFP+CLCF +TI  
Sbjct: 1439 LQVKELGKNIITATVITGKNIGESVYIPRMDLVPTDSGLPFKFSRRQFPICLCFAMTINK 1498

Query: 91   GQGQSLLKVGLYLPRPVFTHGQLYVAVSRV 2
             QGQSL KVG+YLPRPVFTHGQLYVA+SRV
Sbjct: 1499 SQGQSLSKVGMYLPRPVFTHGQLYVAISRV 1528



 Score = 26.9 bits (58), Expect(2) = 2e-33
 Identities = 10/13 (76%), Positives = 12/13 (92%)
 Frame = -2

Query: 311  MRNIDQANSLCNG 273
            +RNIDQA+ LCNG
Sbjct: 1424 LRNIDQASGLCNG 1436


>ref|XP_003599985.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
           gi|355489033|gb|AES70236.1| ATP-dependent DNA helicase
           PIF1 [Medicago truncatula]
          Length = 537

 Score =  140 bits (353), Expect(2) = 2e-33
 Identities = 67/90 (74%), Positives = 74/90 (82%)
 Frame = -3

Query: 271 LQVNDLGKNIITTTVFTGKNIGDRTLIPRMDLVLSDPSFPFKFQRRQFPLCLCFGITIVL 92
           LQV +LGKNIIT TV TGKNIG+   IPRMDLV +D   PFKF RRQFP+CLCF +TI  
Sbjct: 415 LQVKELGKNIITATVITGKNIGESVYIPRMDLVPTDSGLPFKFSRRQFPICLCFAMTINK 474

Query: 91  GQGQSLLKVGLYLPRPVFTHGQLYVAVSRV 2
            QGQSL KVG+YLPRPVFTHGQLYVA+SRV
Sbjct: 475 SQGQSLSKVGMYLPRPVFTHGQLYVAISRV 504



 Score = 26.9 bits (58), Expect(2) = 2e-33
 Identities = 10/13 (76%), Positives = 12/13 (92%)
 Frame = -2

Query: 311 MRNIDQANSLCNG 273
           +RNIDQA+ LCNG
Sbjct: 400 LRNIDQASGLCNG 412


>ref|XP_003600273.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
            gi|355489321|gb|AES70524.1| ATP-dependent DNA helicase
            PIF1 [Medicago truncatula]
          Length = 1634

 Score =  140 bits (353), Expect(2) = 1e-32
 Identities = 67/90 (74%), Positives = 74/90 (82%)
 Frame = -3

Query: 271  LQVNDLGKNIITTTVFTGKNIGDRTLIPRMDLVLSDPSFPFKFQRRQFPLCLCFGITIVL 92
            LQV +LGKNIIT TV TGKNIG+   IPRMDLV +D   PFKF RRQFP+CLCF +TI  
Sbjct: 1512 LQVKELGKNIITATVITGKNIGESVYIPRMDLVPTDSGLPFKFSRRQFPICLCFAMTINK 1571

Query: 91   GQGQSLLKVGLYLPRPVFTHGQLYVAVSRV 2
             QGQSL KVG+YLPRPVFTHGQLYVA+SRV
Sbjct: 1572 SQGQSLSKVGMYLPRPVFTHGQLYVAISRV 1601



 Score = 24.3 bits (51), Expect(2) = 1e-32
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = -2

Query: 311  MRNIDQANSLCNG 273
            +RNID A+ LCNG
Sbjct: 1497 LRNIDLASGLCNG 1509


>ref|XP_003595507.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
            gi|355484555|gb|AES65758.1| ATP-dependent DNA helicase
            PIF1 [Medicago truncatula]
          Length = 1873

 Score =  123 bits (308), Expect(2) = 4e-29
 Identities = 60/90 (66%), Positives = 68/90 (75%)
 Frame = -3

Query: 271  LQVNDLGKNIITTTVFTGKNIGDRTLIPRMDLVLSDPSFPFKFQRRQFPLCLCFGITIVL 92
            L V  LGK+ I  TV TGK  G    IPRM+L+ SDP  PFKF+RRQFPL LCF +TI  
Sbjct: 1751 LTVTHLGKSTIAATVITGKRAGTSVFIPRMNLIPSDPGLPFKFKRRQFPLTLCFAMTINK 1810

Query: 91   GQGQSLLKVGLYLPRPVFTHGQLYVAVSRV 2
             QGQSL +VG+YLP+PVFTHGQLYVAVSRV
Sbjct: 1811 SQGQSLSRVGVYLPKPVFTHGQLYVAVSRV 1840



 Score = 30.0 bits (66), Expect(2) = 4e-29
 Identities = 12/13 (92%), Positives = 12/13 (92%)
 Frame = -2

Query: 311  MRNIDQANSLCNG 273
            MRNIDQAN LCNG
Sbjct: 1736 MRNIDQANGLCNG 1748


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