BLASTX nr result

ID: Glycyrrhiza24_contig00021332 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00021332
         (680 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003552628.1| PREDICTED: pentatricopeptide repeat-containi...   309   4e-82
ref|XP_003530467.1| PREDICTED: pentatricopeptide repeat-containi...   300   1e-79
ref|XP_002278999.1| PREDICTED: pentatricopeptide repeat-containi...   237   1e-60
emb|CAN63553.1| hypothetical protein VITISV_003195 [Vitis vinifera]   235   5e-60
ref|XP_002329308.1| predicted protein [Populus trichocarpa] gi|2...   221   8e-56

>ref|XP_003552628.1| PREDICTED: pentatricopeptide repeat-containing protein At3g02490,
           mitochondrial-like [Glycine max]
          Length = 629

 Score =  309 bits (791), Expect = 4e-82
 Identities = 148/172 (86%), Positives = 163/172 (94%)
 Frame = +2

Query: 2   FKEMVEKEGVESAGYTFDLLMNSYCQMNRAIDGCKILCRLVNEKELKPRHSTYKLLVTKL 181
           FKE+VEKEGV SAGY+F++LMNSYCQMNRA+D  KILCRLVNEK+LKP HSTYKLLVTKL
Sbjct: 458 FKEIVEKEGVASAGYSFNVLMNSYCQMNRAVDASKILCRLVNEKQLKPWHSTYKLLVTKL 517

Query: 182 LVQGGFADALNILGLMRTHGFPPFTDPFVEHISKRGSGDDAVMFLKAMTSKRFPSTSVYL 361
           LVQGGF DALNILGLMRTHGFPPFTDPF+EH+SK GSGDDAV+FLKAMTSKRFPSTS++L
Sbjct: 518 LVQGGFTDALNILGLMRTHGFPPFTDPFIEHLSKSGSGDDAVLFLKAMTSKRFPSTSMFL 577

Query: 362 RMFEAFFEHGRHEEAQNFLSKCPGYIRNHADVLSLFCSMNSKEAASSGVLAA 517
           RMFEAFF+H RHEEAQNFLSKCP YIRNHADVL+LFCS+NSKEAASS +LAA
Sbjct: 578 RMFEAFFKHRRHEEAQNFLSKCPRYIRNHADVLNLFCSLNSKEAASSSMLAA 629


>ref|XP_003530467.1| PREDICTED: pentatricopeptide repeat-containing protein At3g02490,
           mitochondrial-like [Glycine max]
          Length = 628

 Score =  300 bits (769), Expect = 1e-79
 Identities = 146/172 (84%), Positives = 161/172 (93%)
 Frame = +2

Query: 2   FKEMVEKEGVESAGYTFDLLMNSYCQMNRAIDGCKILCRLVNEKELKPRHSTYKLLVTKL 181
           FKE+VEKEGV SAGY+FD+LMNSYCQMNRA+D  KILCRLVNEK+LKP HSTYKLLVTKL
Sbjct: 457 FKEIVEKEGVASAGYSFDVLMNSYCQMNRAVDASKILCRLVNEKKLKPWHSTYKLLVTKL 516

Query: 182 LVQGGFADALNILGLMRTHGFPPFTDPFVEHISKRGSGDDAVMFLKAMTSKRFPSTSVYL 361
           LVQGGF DALNILGLMRT GFPPFTDPF+EH+SK GSG+ A +FLKAMTSKRFPSTS++L
Sbjct: 517 LVQGGFTDALNILGLMRTLGFPPFTDPFIEHLSKSGSGNAAALFLKAMTSKRFPSTSMFL 576

Query: 362 RMFEAFFEHGRHEEAQNFLSKCPGYIRNHADVLSLFCSMNSKEAASSGVLAA 517
            MFEAFF++GRHEEAQNFLSKCP YIRNHADVL+LFCSMNSKEAASSG+LAA
Sbjct: 577 CMFEAFFKNGRHEEAQNFLSKCPRYIRNHADVLNLFCSMNSKEAASSGMLAA 628


>ref|XP_002278999.1| PREDICTED: pentatricopeptide repeat-containing protein At3g02490,
           mitochondrial-like [Vitis vinifera]
          Length = 650

 Score =  237 bits (605), Expect = 1e-60
 Identities = 109/165 (66%), Positives = 139/165 (84%)
 Frame = +2

Query: 2   FKEMVEKEGVESAGYTFDLLMNSYCQMNRAIDGCKILCRLVNEKELKPRHSTYKLLVTKL 181
           F++MVEKEGV  AGY F++L+N+YC   R++D C +LC L ++++ KP HSTYKLL++KL
Sbjct: 483 FQKMVEKEGVSYAGYAFEVLVNAYCCKGRSVDACGLLCDLASKEKFKPWHSTYKLLISKL 542

Query: 182 LVQGGFADALNILGLMRTHGFPPFTDPFVEHISKRGSGDDAVMFLKAMTSKRFPSTSVYL 361
           LVQGGF  ALN+LGLM+ H FPPF DPF+E++S+ G+GDDA+ FL+AMT KRFPSTSV+L
Sbjct: 543 LVQGGFQAALNLLGLMKDHEFPPFLDPFIEYVSRTGTGDDAITFLRAMTVKRFPSTSVFL 602

Query: 362 RMFEAFFEHGRHEEAQNFLSKCPGYIRNHADVLSLFCSMNSKEAA 496
           + FEAFF+ GRH EAQ+FLSKCPGYIRNHADVL+LF +M S EAA
Sbjct: 603 QTFEAFFKAGRHNEAQDFLSKCPGYIRNHADVLNLFYTMKSGEAA 647


>emb|CAN63553.1| hypothetical protein VITISV_003195 [Vitis vinifera]
          Length = 650

 Score =  235 bits (600), Expect = 5e-60
 Identities = 108/165 (65%), Positives = 138/165 (83%)
 Frame = +2

Query: 2   FKEMVEKEGVESAGYTFDLLMNSYCQMNRAIDGCKILCRLVNEKELKPRHSTYKLLVTKL 181
           F++MVEKEGV   GY F++L+N+YC   R++D C +LC L ++++ KP HSTYKLL++KL
Sbjct: 483 FQKMVEKEGVSYXGYAFEVLVNAYCCKGRSVDACGLLCDLASKEKFKPWHSTYKLLISKL 542

Query: 182 LVQGGFADALNILGLMRTHGFPPFTDPFVEHISKRGSGDDAVMFLKAMTSKRFPSTSVYL 361
           LVQGGF  ALN+LGLM+ H FPPF DPF+E++S+ G+GDDA+ FL+AMT KRFPSTSV+L
Sbjct: 543 LVQGGFQAALNLLGLMKDHEFPPFLDPFIEYVSRTGTGDDAITFLRAMTVKRFPSTSVFL 602

Query: 362 RMFEAFFEHGRHEEAQNFLSKCPGYIRNHADVLSLFCSMNSKEAA 496
           + FEAFF+ GRH EAQ+FLSKCPGYIRNHADVL+LF +M S EAA
Sbjct: 603 QTFEAFFKAGRHNEAQDFLSKCPGYIRNHADVLNLFYTMKSGEAA 647


>ref|XP_002329308.1| predicted protein [Populus trichocarpa] gi|222870762|gb|EEF07893.1|
           predicted protein [Populus trichocarpa]
          Length = 658

 Score =  221 bits (564), Expect = 8e-56
 Identities = 105/170 (61%), Positives = 135/170 (79%), Gaps = 1/170 (0%)
 Frame = +2

Query: 2   FKEMVEKEGVESAGYTFDLLMNSYCQMNRAIDGCKILCRLVNEKELKPRHSTYKLLVTKL 181
           FK+MVEK+GV  AGY  +LL+N+YC  NRA D C +LC  V + +L P  +TYK+L++KL
Sbjct: 487 FKKMVEKKGVTGAGYAVELLVNAYCLKNRAGDACNLLCDYVCQNQLHPWRTTYKVLISKL 546

Query: 182 LVQGGFADALNILGLMRTHGFPPFTDPFVEHISKRGSGDDAVMFLKAMTSKRFPSTSVYL 361
           L QGGF DALN+LGLM++HG PP+ DPF E +SK G+GDDA+ F+ AMT+K+FPS SV L
Sbjct: 547 LAQGGFKDALNLLGLMQSHGIPPYIDPFFEFVSKSGTGDDAIAFMNAMTTKKFPSISVSL 606

Query: 362 RMFEAFFEHGRHEEAQNFLSKCPGYIRNHADVLSLFCSM-NSKEAASSGV 508
           R+FEAFF   RH EAQ+FLSKCP +IRNHADVL+LFCSM +SK+ A++ V
Sbjct: 607 RLFEAFFNAKRHSEAQDFLSKCPVFIRNHADVLTLFCSMKSSKDTAAATV 656


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