BLASTX nr result

ID: Glycyrrhiza24_contig00021325 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00021325
         (393 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003521638.1| PREDICTED: translation initiation factor IF-...   141   5e-32
ref|XP_003554592.1| PREDICTED: translation initiation factor IF-...   133   1e-29
ref|XP_003613053.1| Translation initiation factor IF-2 [Medicago...    88   8e-16
ref|XP_004167749.1| PREDICTED: translation initiation factor IF-...    68   7e-10
ref|XP_002279490.2| PREDICTED: translation initiation factor IF-...    67   1e-09

>ref|XP_003521638.1| PREDICTED: translation initiation factor IF-2-like [Glycine max]
          Length = 718

 Score =  141 bits (356), Expect = 5e-32
 Identities = 73/102 (71%), Positives = 80/102 (78%)
 Frame = +1

Query: 85  MAWLELGKKRIYMNFTRALTAAPFRHVLGSSSASIFAAQSVYASARCMPDFINHSYLGMA 264
           MAW ELGKKRIYMNFTRAL+  PFRHV GS+ ASIF  QSV ASARC+PDFIN S LG+A
Sbjct: 1   MAWRELGKKRIYMNFTRALSTTPFRHVAGSNFASIFTVQSVCASARCVPDFINLSSLGVA 60

Query: 265 GFCSGTKECGTRCFHASSQVWGRRGDEPFGLKTPKKEKYVRR 390
           GF   TKECG RCFHASSQVW  R D P GL+T K+  YV+R
Sbjct: 61  GFGRETKECGIRCFHASSQVWA-RSDGPLGLQTAKR-IYVKR 100


>ref|XP_003554592.1| PREDICTED: translation initiation factor IF-2-like [Glycine max]
          Length = 718

 Score =  133 bits (335), Expect = 1e-29
 Identities = 69/102 (67%), Positives = 76/102 (74%)
 Frame = +1

Query: 85  MAWLELGKKRIYMNFTRALTAAPFRHVLGSSSASIFAAQSVYASARCMPDFINHSYLGMA 264
           MAW ELGKKRIYMNFTRALT  PFR+  GS+ ASIF  QSV ASARC+PDF N S  G+A
Sbjct: 1   MAWRELGKKRIYMNFTRALTTTPFRYAAGSNFASIFTVQSVCASARCVPDFTNQSSQGVA 60

Query: 265 GFCSGTKECGTRCFHASSQVWGRRGDEPFGLKTPKKEKYVRR 390
           G    TKEC  RCFHASSQVW  R D P GL+TPK+  YV+R
Sbjct: 61  GCGRETKECEIRCFHASSQVWA-RSDGPLGLQTPKR-VYVKR 100


>ref|XP_003613053.1| Translation initiation factor IF-2 [Medicago truncatula]
           gi|355514388|gb|AES96011.1| Translation initiation
           factor IF-2 [Medicago truncatula]
          Length = 749

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 40/55 (72%), Positives = 45/55 (81%)
 Frame = +1

Query: 226 MPDFINHSYLGMAGFCSGTKECGTRCFHASSQVWGRRGDEPFGLKTPKKEKYVRR 390
           MPDFINHS +G AG+ SGTKECG RCFHASSQVW  R D  +GLK PK+EKYVR+
Sbjct: 1   MPDFINHSCIGGAGYSSGTKECGIRCFHASSQVWS-RSDAAYGLKPPKREKYVRK 54


>ref|XP_004167749.1| PREDICTED: translation initiation factor IF-2-like [Cucumis
           sativus]
          Length = 130

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 42/107 (39%), Positives = 62/107 (57%), Gaps = 4/107 (3%)
 Frame = +1

Query: 85  MAWLELGKKRIYMNFTRALTAAPFRHVLGSS--SASIFAAQSVYASARCMPDF-INHSYL 255
           MAW ELGKK ++    R  T +  RH++  +  +      + + AS+R +PD     +Y 
Sbjct: 1   MAWRELGKKGMHAGLRRTFTCSR-RHIVRPNFLTTDEVVIKLIPASSRFIPDVPCGSAYH 59

Query: 256 GMAGFCSGTKECGTRCFHASSQVWGRRG-DEPFGLKTPKKEKYVRRD 393
           G   + + T E   RCFH+S+++   RG D+ FGLKT KKEK+VRRD
Sbjct: 60  GSDFYVASTIEAPRRCFHSSAELLAGRGHDKEFGLKTQKKEKFVRRD 106


>ref|XP_002279490.2| PREDICTED: translation initiation factor IF-2-like [Vitis vinifera]
           gi|296089697|emb|CBI39516.3| unnamed protein product
           [Vitis vinifera]
          Length = 725

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 47/107 (43%), Positives = 60/107 (56%), Gaps = 4/107 (3%)
 Frame = +1

Query: 85  MAWLELGKKRIYMNFTRALTAAPFRHVLGSSSASIF--AAQSVYASARCMPDF-INHSYL 255
           MAW E+GKK I  N T+AL +   R V    S  I   A +S+ +S + +P F  + S L
Sbjct: 1   MAWREVGKKSICANLTKALASTKSRDVPDPLSTPILEDALKSISSSIKHVPVFSASKSSL 60

Query: 256 GMAGFCSGTKECGTRCFHASSQVWGRR-GDEPFGLKTPKKEKYVRRD 393
           G            TR FHAS  +  RR  DEPFGLKTPK+EKYV+R+
Sbjct: 61  GADKCQILPNRPLTRRFHASPGLLARRRSDEPFGLKTPKREKYVKRE 107


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