BLASTX nr result

ID: Glycyrrhiza24_contig00021309 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00021309
         (531 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003607468.1| hypothetical protein MTR_4g078340 [Medicago ...   115   4e-24
ref|XP_003588770.1| hypothetical protein MTR_1g012560 [Medicago ...   110   1e-22
gb|ABD28710.1| Polynucleotidyl transferase, Ribonuclease H fold ...   105   4e-21
ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding sub...   104   9e-21
ref|XP_003598202.1| 60S ribosomal protein L23 [Medicago truncatu...   104   9e-21

>ref|XP_003607468.1| hypothetical protein MTR_4g078340 [Medicago truncatula]
           gi|355508523|gb|AES89665.1| hypothetical protein
           MTR_4g078340 [Medicago truncatula]
          Length = 181

 Score =  115 bits (288), Expect = 4e-24
 Identities = 62/170 (36%), Positives = 93/170 (54%), Gaps = 1/170 (0%)
 Frame = +1

Query: 22  TQSAVTIDSNSNWHPPPEDIVKCNVDASFSHPVGSVCIGMCLRDSSGSFIQAHSICINQP 201
           T ++ +      W P      KCN+DA+F+  V   CIG+C+RD+ G+F+ A ++     
Sbjct: 10  TTASTSQQHRITWQPHVAGRYKCNIDAAFTSHVNCTCIGICVRDAEGTFVLAKTMTYPCT 69

Query: 202 LSVHEGEALGVLEAI*WVQMLGYSRVVIEMDCKVVVDHLGANHQFLSEIGITLQRCSHLL 381
           +SV  GEALG+  A+ W+  + +  V  E D K+  D   +    LSE G  +  C  L 
Sbjct: 70  VSVDVGEALGMHSALQWLSDMQFDNVDFETDSKLTADAFLSTMNDLSEFGCIIFSCRSLF 129

Query: 382 S-CFPNFRVKFIRRSAHGVAHSLARATPLIAGSTVFYHALPCISLLILNE 528
           S  F NFRV+F+R+ A+ VAH+L R T  +A   V++    CI  LI+NE
Sbjct: 130 STSFSNFRVEFVRQQANVVAHALTRETTSLASPAVYFDISNCIETLIINE 179


>ref|XP_003588770.1| hypothetical protein MTR_1g012560 [Medicago truncatula]
           gi|355477818|gb|AES59021.1| hypothetical protein
           MTR_1g012560 [Medicago truncatula]
          Length = 214

 Score =  110 bits (275), Expect = 1e-22
 Identities = 64/159 (40%), Positives = 81/159 (50%), Gaps = 1/159 (0%)
 Frame = +1

Query: 58  WHPPPEDIVKCNVDASFSHPVGSVCIGMCLRDSSGSFIQAHSICINQPLSVHEGEALGVL 237
           W  P     KCN+D SFS  +  V IG+C RD  G F+ A   C      V  GEA+G  
Sbjct: 55  WSKPAYGRYKCNIDTSFSSSMNMVGIGICFRDDRGEFVSAKIDCFPPLCDVAVGEAVGFH 114

Query: 238 EAI*WVQMLGYSRVVIEMDCKVVVDHLGANHQFLSEIGITLQRCSHLLS-CFPNFRVKFI 414
             + W+  L Y  V   +D K+VVDH  ++ +  SE G  +  C  L    F N  V+F 
Sbjct: 115 TKLKWMAELHYDNVDFALDSKIVVDHFRSSLEDDSEFGCIMYDCKQLFEISFQNSHVEFN 174

Query: 415 RRSAHGVAHSLARATPLIAGSTVFYHALPCISLLILNEK 531
           RR A+GVAH L R  P  A S V+ +   CIS LI NEK
Sbjct: 175 RRQANGVAHELVRVAPSHASSHVYGNVPSCISSLIDNEK 213


>gb|ABD28710.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 393

 Score =  105 bits (262), Expect = 4e-21
 Identities = 64/164 (39%), Positives = 90/164 (54%), Gaps = 4/164 (2%)
 Frame = +1

Query: 49  NSNWHPPPEDIVKCNVDASFSHPVGSVCIGMCLRDSSGSFIQAHSICINQPLSVHEGEAL 228
           N  W  P    +KCNVDASFS     V IGMC+RDS G+ +++ ++  +    V+ GEAL
Sbjct: 231 NIRWRKPKSGRLKCNVDASFSTSSNKVGIGMCIRDSEGNHVRSKTMWFSPLCPVNIGEAL 290

Query: 229 GVLEAI*WVQMLGYSRVVIEMDCKVVVDHL----GANHQFLSEIGITLQRCSHLLSCFPN 396
           G+  A  W+  L  + V  E+D K + D+     G N +F S +  T+Q C+  L+   N
Sbjct: 291 GLYHATRWINELQLTNVDFEVDSKTIADYFNKARGDNTEFGSIMENTIQFCNIFLT---N 347

Query: 397 FRVKFIRRSAHGVAHSLARATPLIAGSTVFYHALPCISLLILNE 528
             V+F RR A+ VAH LA+A  L     +F  +  CIS LI NE
Sbjct: 348 SHVEFTRRQANEVAHELAKAATLGPSFHIFDESPTCISDLIFNE 391


>ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
            truncatula] gi|355513943|gb|AES95566.1| Replication
            protein A 70 kDa DNA-binding subunit [Medicago
            truncatula]
          Length = 1723

 Score =  104 bits (259), Expect = 9e-21
 Identities = 61/158 (38%), Positives = 84/158 (53%), Gaps = 1/158 (0%)
 Frame = +1

Query: 58   WHPPPEDIVKCNVDASFSHPVGSVCIGMCLRDSSGSFIQAHSICINQPLSVHEGEALGVL 237
            W  P E   KCNVDA+F      V IG+C+RD SG  ++A +      L V EGEA+G+L
Sbjct: 1564 WRKPDEGHFKCNVDAAFFKESNRVGIGICIRDDSGRLVKARTSWSTLLLDVPEGEAIGLL 1623

Query: 238  EAI*WVQMLGYSRVVIEMDCKVVVDHLGANHQFLSEIGITLQRC-SHLLSCFPNFRVKFI 414
             AI W +    + +  E+D K VV         +S++G  ++ C +   S F N RV+FI
Sbjct: 1624 YAIRWAKEQNLNNITFELDSKRVVYSFHNTRNDVSDLGAIIRECRTTFSSFFTNSRVEFI 1683

Query: 415  RRSAHGVAHSLARATPLIAGSTVFYHALPCISLLILNE 528
            RR A+ V HSLARA    A    F     CI  +++NE
Sbjct: 1684 RRQANEVVHSLARAATFYASIHYFTVLPDCIQDVLINE 1721


>ref|XP_003598202.1| 60S ribosomal protein L23 [Medicago truncatula]
           gi|355487250|gb|AES68453.1| 60S ribosomal protein L23
           [Medicago truncatula]
          Length = 547

 Score =  104 bits (259), Expect = 9e-21
 Identities = 56/149 (37%), Positives = 80/149 (53%)
 Frame = +1

Query: 13  SSTTQSAVTIDSNSNWHPPPEDIVKCNVDASFSHPVGSVCIGMCLRDSSGSFIQAHSICI 192
           S+TTQ   +      W PP    +KCNVDA+          GMC+RD  G F++A +   
Sbjct: 42  SATTQVQQSPQDTIAWQPPAAGFLKCNVDAAIFSEQNRFGTGMCVRDQRGRFLKAATNWY 101

Query: 193 NQPLSVHEGEALGVLEAI*WVQMLGYSRVVIEMDCKVVVDHLGANHQFLSEIGITLQRCS 372
                  E EA+G+ +AI W+  L  S V +E+DCK+VVD +   +   +E G  +  C 
Sbjct: 102 EGCPPPQEAEAVGLRDAILWLGQLELSNVQLELDCKLVVDSIYDKNNNQAEFGSIIDDCR 161

Query: 373 HLLSCFPNFRVKFIRRSAHGVAHSLARAT 459
            LL  F NF++ F+RR A+ VAHS AR +
Sbjct: 162 SLLQQFTNFKISFVRRQANVVAHSFARVS 190


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