BLASTX nr result

ID: Glycyrrhiza24_contig00021307 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00021307
         (1246 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003638145.1| Membrane protein, putative [Medicago truncat...   638   e-180
ref|XP_003551034.1| PREDICTED: uncharacterized membrane protein ...   612   e-173
ref|XP_003638735.1| Membrane protein, putative [Medicago truncat...   512   e-143
ref|XP_002277444.1| PREDICTED: uncharacterized membrane protein ...   449   e-124
gb|AFK40944.1| unknown [Medicago truncatula]                          432   e-119

>ref|XP_003638145.1| Membrane protein, putative [Medicago truncatula]
            gi|358349418|ref|XP_003638734.1| Membrane protein,
            putative [Medicago truncatula]
            gi|355504080|gb|AES85283.1| Membrane protein, putative
            [Medicago truncatula] gi|355504669|gb|AES85872.1|
            Membrane protein, putative [Medicago truncatula]
          Length = 597

 Score =  638 bits (1645), Expect = e-180
 Identities = 328/380 (86%), Positives = 345/380 (90%), Gaps = 1/380 (0%)
 Frame = -3

Query: 1244 LLHDLISREGPFLETVCVPIAGLTIFVWPXXXXXXXXXXXXXXIFVGLYASIIVYQERSF 1065
            LLHDLISREGPFLETVCVPIAGLTIFVWP              IFVGLYASIIVYQERSF
Sbjct: 219  LLHDLISREGPFLETVCVPIAGLTIFVWPLVVIASILLAVVSSIFVGLYASIIVYQERSF 278

Query: 1064 RRGLAYIVAMVAEFDEYTNDWLYLREGTFFPRPQYRKKMASQSSEFSNRGNSVAGSKLNT 885
             RGLAYI+AMVAEFDEYTNDWLYLREG+FFP+PQYRKKM SQSSEFS RGN+ + S+ NT
Sbjct: 279  HRGLAYIMAMVAEFDEYTNDWLYLREGSFFPKPQYRKKMVSQSSEFSTRGNNTSESRSNT 338

Query: 884  TTMEPPAMFMPNLAPSRSVRETIQEVKMVQIWGNMMKSCEIRGKELLDANILTAADLYEW 705
            T MEPPAMFMPNLAPSRSVRETIQEVKMVQIWGNMM+ CEIRGKELLDAN+LTAADLYEW
Sbjct: 339  T-MEPPAMFMPNLAPSRSVRETIQEVKMVQIWGNMMRDCEIRGKELLDANVLTAADLYEW 397

Query: 704  LRGKNINEAAIVGVGLPCYSLLQTLLFSIKANSSGVLLLDDFEITYLNRPKDKLLDWFFN 525
            LRGKN+NEA+IVGVGLPCYSLLQTLLFSIKANSSGVLLLDDFEIT+ NRPKDKLLDWFFN
Sbjct: 398  LRGKNVNEASIVGVGLPCYSLLQTLLFSIKANSSGVLLLDDFEITHFNRPKDKLLDWFFN 457

Query: 524  PVMVLKEQIRVIKLVEGEVRYLEKVVLFGSNKQRLEACDNGSLVITDALRAAQIEGISRR 345
            PVMVLKEQIRVIKLVEGEVRYLEKVVLFG NKQRL+  DNGSL+I D LRAAQIEGISRR
Sbjct: 458  PVMVLKEQIRVIKLVEGEVRYLEKVVLFGVNKQRLKTWDNGSLLIPDGLRAAQIEGISRR 517

Query: 344  MIGMIRSVSKLPTYRRKFRQVVKAIVTHSLEKDASEKALVTHSLDIDVSEKALVTRYLEK 165
            MIGMIR VSKLPTYRRKFRQV+KA+ THSLEKDASEKALVTHS D DVS K+LVT YLEK
Sbjct: 518  MIGMIRGVSKLPTYRRKFRQVLKALFTHSLEKDASEKALVTHSQDRDVSGKSLVTHYLEK 577

Query: 164  DPSGR-STRSIVSVPSDDNV 108
            DPSGR STRSIVSVPSD+NV
Sbjct: 578  DPSGRSSTRSIVSVPSDENV 597


>ref|XP_003551034.1| PREDICTED: uncharacterized membrane protein At3g27390-like [Glycine
            max]
          Length = 594

 Score =  612 bits (1579), Expect = e-173
 Identities = 313/379 (82%), Positives = 341/379 (89%), Gaps = 2/379 (0%)
 Frame = -3

Query: 1244 LLHDLISREGPFLETVCVPIAGLTIFVWPXXXXXXXXXXXXXXIFVGLYASIIVYQERSF 1065
            LLHDLISREGPFLE VC+PIAGLTIFVWP              IFVGLYAS+IVYQERSF
Sbjct: 218  LLHDLISREGPFLEIVCIPIAGLTIFVWPLVVIASILLAIFSSIFVGLYASVIVYQERSF 277

Query: 1064 RRGLAYIVAMVAEFDEYTNDWLYLREGTFFPRPQYRKKMASQSSEFSNRGNSVAGSKLNT 885
            RRG+AY++AMVAEFDEYTNDWLYLREGTF P+PQYRKK ASQSSEFS RGNSV G+    
Sbjct: 278  RRGIAYVIAMVAEFDEYTNDWLYLREGTFLPKPQYRKKKASQSSEFSVRGNSVRGN---- 333

Query: 884  TTMEPPAMFMPNLAPSRSVRETIQEVKMVQIWGNMMKSCEIRGKELLDANILTAADLYEW 705
            T+MEPPAM MP LAPSRSV+ETIQEVKMVQIWGNMM+ CE+RGKELLDAN+LTA+DLYEW
Sbjct: 334  TSMEPPAMLMPCLAPSRSVKETIQEVKMVQIWGNMMRYCEMRGKELLDANVLTASDLYEW 393

Query: 704  LRGKNINEAAIVGVGLPCYSLLQTLLFSIKANSSGVLLLDDFEITYLNRPKDKLLDWFFN 525
            ++GKN NEAAIVGVGLPCYSLLQTL+FSIKANS GVLLLDDFEITYLNRPKDKLLDWFFN
Sbjct: 394  MKGKNNNEAAIVGVGLPCYSLLQTLVFSIKANSCGVLLLDDFEITYLNRPKDKLLDWFFN 453

Query: 524  PVMVLKEQIRVIKLVEGEVRYLEKVVLFGSNKQRLEACDNGSLVITDALRAAQIEGISRR 345
            PVMVLKEQIRVIKL E E+RYLEKVVLFGSNKQR+EA DNG L+I DALRAAQIEGISRR
Sbjct: 454  PVMVLKEQIRVIKLGEAELRYLEKVVLFGSNKQRMEAWDNGGLMIHDALRAAQIEGISRR 513

Query: 344  MIGMIRSVSKLPTYRRKFRQVVKAIVTHSLEKDASEKALVT-HSLDI-DVSEKALVTRYL 171
            MIGMIR +SKLPTY+RKFRQ+VKA+VTHSLEKD SE+ALVT HS+D+ DVSEKALVTRYL
Sbjct: 514  MIGMIRGISKLPTYKRKFRQIVKALVTHSLEKDVSERALVTHHSVDVLDVSEKALVTRYL 573

Query: 170  EKDPSGRSTRSIVSVPSDD 114
            EKDPSGRS+RSIVSV SD+
Sbjct: 574  EKDPSGRSSRSIVSVASDE 592


>ref|XP_003638735.1| Membrane protein, putative [Medicago truncatula]
            gi|355504670|gb|AES85873.1| Membrane protein, putative
            [Medicago truncatula]
          Length = 532

 Score =  512 bits (1318), Expect = e-143
 Identities = 259/300 (86%), Positives = 272/300 (90%)
 Frame = -3

Query: 1244 LLHDLISREGPFLETVCVPIAGLTIFVWPXXXXXXXXXXXXXXIFVGLYASIIVYQERSF 1065
            LLHDLISREGPFLETVCVPIAGLTIFVWP              IFVGLYASIIVYQERSF
Sbjct: 219  LLHDLISREGPFLETVCVPIAGLTIFVWPLVVIASILLAVVSSIFVGLYASIIVYQERSF 278

Query: 1064 RRGLAYIVAMVAEFDEYTNDWLYLREGTFFPRPQYRKKMASQSSEFSNRGNSVAGSKLNT 885
             RGLAYI+AMVAEFDEYTNDWLYLREG+FFP+PQYRKKM SQSSEFS RGN+ + S+ NT
Sbjct: 279  HRGLAYIMAMVAEFDEYTNDWLYLREGSFFPKPQYRKKMVSQSSEFSTRGNNTSESRSNT 338

Query: 884  TTMEPPAMFMPNLAPSRSVRETIQEVKMVQIWGNMMKSCEIRGKELLDANILTAADLYEW 705
            T MEPPAMFMPNLAPSRSVRETIQEVKMVQIWGNMM+ CEIRGKELLDAN+LTAADLYEW
Sbjct: 339  T-MEPPAMFMPNLAPSRSVRETIQEVKMVQIWGNMMRDCEIRGKELLDANVLTAADLYEW 397

Query: 704  LRGKNINEAAIVGVGLPCYSLLQTLLFSIKANSSGVLLLDDFEITYLNRPKDKLLDWFFN 525
            LRGKN+NEA+IVGVGLPCYSLLQTLLFSIKANSSGVLLLDDFEIT+ NRPKDKLLDWFFN
Sbjct: 398  LRGKNVNEASIVGVGLPCYSLLQTLLFSIKANSSGVLLLDDFEITHFNRPKDKLLDWFFN 457

Query: 524  PVMVLKEQIRVIKLVEGEVRYLEKVVLFGSNKQRLEACDNGSLVITDALRAAQIEGISRR 345
            PVMVLKEQIRVIKLVEGEVRYLEKVVLFG NKQRL+  DNGSL+I D LRAAQIEGISRR
Sbjct: 458  PVMVLKEQIRVIKLVEGEVRYLEKVVLFGVNKQRLKTWDNGSLLIPDGLRAAQIEGISRR 517


>ref|XP_002277444.1| PREDICTED: uncharacterized membrane protein At3g27390 [Vitis
            vinifera] gi|296082433|emb|CBI21438.3| unnamed protein
            product [Vitis vinifera]
          Length = 559

 Score =  449 bits (1155), Expect = e-124
 Identities = 217/344 (63%), Positives = 274/344 (79%)
 Frame = -3

Query: 1244 LLHDLISREGPFLETVCVPIAGLTIFVWPXXXXXXXXXXXXXXIFVGLYASIIVYQERSF 1065
            L+HDLISREGPFLET C+PIAGLTI +WP               F+GLY ++IVYQE+SF
Sbjct: 214  LIHDLISREGPFLETACIPIAGLTIIMWPLIVIGSILLAIFSSFFIGLYGAVIVYQEKSF 273

Query: 1064 RRGLAYIVAMVAEFDEYTNDWLYLREGTFFPRPQYRKKMASQSSEFSNRGNSVAGSKLNT 885
             +G+AY++AMVAEFDEYTNDWLYLREGT  PRP+YR+K  S+SSE S   +  AG +LN 
Sbjct: 274  CKGVAYVIAMVAEFDEYTNDWLYLREGTVLPRPRYRRK-GSRSSELSVGASLRAGGRLNL 332

Query: 884  TTMEPPAMFMPNLAPSRSVRETIQEVKMVQIWGNMMKSCEIRGKELLDANILTAADLYEW 705
             ++EP  M +P+LAPSRSVRE++QEV++ QIW N+M+SCE+RGKELLDAN++   DLYEW
Sbjct: 333  ISVEPRGMLVPSLAPSRSVRESMQEVQVFQIWENVMRSCEMRGKELLDANVIAPDDLYEW 392

Query: 704  LRGKNINEAAIVGVGLPCYSLLQTLLFSIKANSSGVLLLDDFEITYLNRPKDKLLDWFFN 525
            L  KN N+AAIVGVGLPCYSL Q LLFSIK+ S G+++LD  E+T LN P+D+L+DWFF 
Sbjct: 393  LSAKNSNDAAIVGVGLPCYSLFQNLLFSIKSGSVGLVMLDGVEVTNLNVPQDRLMDWFFQ 452

Query: 524  PVMVLKEQIRVIKLVEGEVRYLEKVVLFGSNKQRLEACDNGSLVITDALRAAQIEGISRR 345
            P+MVLKEQI+VI L EGE+RYLEK ++FG N QR+E+ +NGS V  DALRAAQI+GI+RR
Sbjct: 453  PIMVLKEQIKVIALGEGEIRYLEKFIIFGGNTQRMESWNNGSFVPEDALRAAQIQGITRR 512

Query: 344  MIGMIRSVSKLPTYRRKFRQVVKAIVTHSLEKDASEKALVTHSL 213
            MIG++RSVSKLPTYRRKFR VVKA++ +S EKD + ++    S+
Sbjct: 513  MIGIVRSVSKLPTYRRKFRNVVKALIAYSFEKDGTIRSSSARSV 556


>gb|AFK40944.1| unknown [Medicago truncatula]
          Length = 469

 Score =  432 bits (1111), Expect = e-119
 Identities = 215/250 (86%), Positives = 227/250 (90%)
 Frame = -3

Query: 1244 LLHDLISREGPFLETVCVPIAGLTIFVWPXXXXXXXXXXXXXXIFVGLYASIIVYQERSF 1065
            LLHDLISREGPFLETVCVPIAGLTIFVWP              IFVGLYASIIVYQERSF
Sbjct: 219  LLHDLISREGPFLETVCVPIAGLTIFVWPLVVIASILLAVVSSIFVGLYASIIVYQERSF 278

Query: 1064 RRGLAYIVAMVAEFDEYTNDWLYLREGTFFPRPQYRKKMASQSSEFSNRGNSVAGSKLNT 885
             RGLAYI+AMVAEFDEYTNDWLYLREG+FFP+PQYRKKM SQSSEFS RGN+ + S+ NT
Sbjct: 279  HRGLAYIMAMVAEFDEYTNDWLYLREGSFFPKPQYRKKMVSQSSEFSTRGNNTSESRSNT 338

Query: 884  TTMEPPAMFMPNLAPSRSVRETIQEVKMVQIWGNMMKSCEIRGKELLDANILTAADLYEW 705
            T MEPPAMFMPNLAPSRSVRETIQEVKMVQIWGNMM+ CEIRGKELLDAN+LTAADLYEW
Sbjct: 339  T-MEPPAMFMPNLAPSRSVRETIQEVKMVQIWGNMMRDCEIRGKELLDANVLTAADLYEW 397

Query: 704  LRGKNINEAAIVGVGLPCYSLLQTLLFSIKANSSGVLLLDDFEITYLNRPKDKLLDWFFN 525
            LRGKN+NEA+IVGVGLPCYSLLQTLLFSIKANSSGVLLLDDFEIT+ NRPKDKLLDWFFN
Sbjct: 398  LRGKNVNEASIVGVGLPCYSLLQTLLFSIKANSSGVLLLDDFEITHFNRPKDKLLDWFFN 457

Query: 524  PVMVLKEQIR 495
            PVMVLKEQI+
Sbjct: 458  PVMVLKEQIK 467


Top