BLASTX nr result

ID: Glycyrrhiza24_contig00021225 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00021225
         (318 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003590599.1| FAR1-related protein [Medicago truncatula] g...   107   1e-21
ref|XP_003616094.1| FAR1-related protein [Medicago truncatula] g...   105   3e-21
ref|XP_003597711.1| FAR1-related protein [Medicago truncatula] g...   104   7e-21
ref|XP_003636545.1| Pentatricopeptide repeat-containing protein ...    87   1e-15
emb|CAE02528.2| OSJNBb0003A12.15 [Oryza sativa Japonica Group]         79   3e-13

>ref|XP_003590599.1| FAR1-related protein [Medicago truncatula]
           gi|355479647|gb|AES60850.1| FAR1-related protein
           [Medicago truncatula]
          Length = 418

 Score =  107 bits (267), Expect = 1e-21
 Identities = 46/105 (43%), Positives = 72/105 (68%)
 Frame = +3

Query: 3   NMSDLSNQNIMRFHFADIGVAFKFYSWYGSLHGFGARKSKILWNCKGEAIQQTFLCNREG 182
           ++ ++S + +MR+HF+D  VAF FYS+Y  L+GF  R+S+ + N   + ++QTFLC+REG
Sbjct: 81  DLKEISCEEVMRYHFSDREVAFMFYSFYACLNGFAGRRSRNVRNVNRQIVRQTFLCHREG 140

Query: 183 YREPKHMIRVEKKREPKQNTRCGCTAKCHVHVEESCGRWFIKYFN 317
            R+ K+     +KRE K N+RC C AK  VH++    RW++KYF+
Sbjct: 141 IRDDKYSKTNIRKREHKPNSRCSCQAKFQVHIDFQSDRWYVKYFD 185


>ref|XP_003616094.1| FAR1-related protein [Medicago truncatula]
           gi|355517429|gb|AES99052.1| FAR1-related protein
           [Medicago truncatula]
          Length = 347

 Score =  105 bits (263), Expect = 3e-21
 Identities = 47/92 (51%), Positives = 63/92 (68%)
 Frame = +3

Query: 42  HFADIGVAFKFYSWYGSLHGFGARKSKILWNCKGEAIQQTFLCNREGYREPKHMIRVEKK 221
           +F    VAF FY+WYG  HGF  RKS+++ N KGE +QQTFLC+REG R  ++     +K
Sbjct: 122 NFDSENVAFMFYNWYGCSHGFAGRKSRVVRNVKGEIVQQTFLCHREGNRSERNRNPDVQK 181

Query: 222 REPKQNTRCGCTAKCHVHVEESCGRWFIKYFN 317
           RE K  +RCGC AK  VH++   GRW+IK+F+
Sbjct: 182 RELKPISRCGCEAKIQVHIDFDSGRWYIKFFD 213


>ref|XP_003597711.1| FAR1-related protein [Medicago truncatula]
           gi|355486759|gb|AES67962.1| FAR1-related protein
           [Medicago truncatula]
          Length = 211

 Score =  104 bits (260), Expect = 7e-21
 Identities = 45/101 (44%), Positives = 66/101 (65%)
 Frame = +3

Query: 15  LSNQNIMRFHFADIGVAFKFYSWYGSLHGFGARKSKILWNCKGEAIQQTFLCNREGYREP 194
           L+  ++M+FHF +I VA+ FY+WY  ++GF AR+ K+  N   E IQQ F+C R+G+RE 
Sbjct: 51  LNASDVMKFHFPNIAVAYAFYNWYARMNGFSARRRKVRRNKNNEIIQQIFVCYRQGFREK 110

Query: 195 KHMIRVEKKREPKQNTRCGCTAKCHVHVEESCGRWFIKYFN 317
           K      +KRE + +TRCGC AKC VH++     W++  FN
Sbjct: 111 KLENNKIRKREARADTRCGCDAKCSVHIDSGSRCWYVWDFN 151


>ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355502480|gb|AES83683.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 1280

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 38/80 (47%), Positives = 55/80 (68%)
 Frame = +3

Query: 15   LSNQNIMRFHFADIGVAFKFYSWYGSLHGFGARKSKILWNCKGEAIQQTFLCNREGYREP 194
            L+  ++M+FHF +I VA+ FY+WY  ++GF AR+SK+  N   E IQQ F+C R+G+RE 
Sbjct: 1178 LNASDVMKFHFPNIAVAYTFYNWYARMNGFSARRSKVRRNKNNEIIQQIFVCYRQGFREK 1237

Query: 195  KHMIRVEKKREPKQNTRCGC 254
            K      +KRE + +TRCGC
Sbjct: 1238 KLENNKIRKREARADTRCGC 1257


>emb|CAE02528.2| OSJNBb0003A12.15 [Oryza sativa Japonica Group]
          Length = 525

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 40/84 (47%), Positives = 49/84 (58%)
 Frame = +3

Query: 66  FKFYSWYGSLHGFGARKSKILWNCKGEAIQQTFLCNREGYREPKHMIRVEKKREPKQNTR 245
           +KFY  Y    GF  RK+  L    GE I + F+C+ EGYRE KH  R+E+KREP   T 
Sbjct: 9   YKFYLDYAKGKGFSVRKNN-LKRKDGEIIWRQFVCSSEGYRELKHFERIERKREPWALTH 67

Query: 246 CGCTAKCHVHVEESCGRWFIKYFN 317
           CGC AK  +   E  G WF+K FN
Sbjct: 68  CGCLAKLEIEWNEEKGVWFVKEFN 91


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