BLASTX nr result

ID: Glycyrrhiza24_contig00021212 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00021212
         (603 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520739.1| protein binding protein, putative [Ricinus c...    88   1e-15
ref|XP_002873941.1| armadillo/beta-catenin repeat family protein...    82   6e-14
ref|XP_004134143.1| PREDICTED: ARM REPEAT PROTEIN INTERACTING WI...    82   9e-14
ref|NP_850852.1| ARM repeat protein interacting with ABF2 [Arabi...    80   2e-13
ref|XP_002314713.1| predicted protein [Populus trichocarpa] gi|2...    78   1e-12

>ref|XP_002520739.1| protein binding protein, putative [Ricinus communis]
           gi|223540124|gb|EEF41701.1| protein binding protein,
           putative [Ricinus communis]
          Length = 598

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 52/138 (37%), Positives = 77/138 (55%), Gaps = 6/138 (4%)
 Frame = -3

Query: 595 MDHNPRT--RCLKRKLDQQDYSTEEDQRDRKCKVLLLDHP----HDIPTEIHNHLALLDS 434
           MDH   T  + LKRKL+Q  +   +  R+RK   +  D       D+  +I  H+ +L+S
Sbjct: 1   MDHQTITARKSLKRKLEQDFHEDRDHDRNRKIPAIEADDDDTTREDLARDIQAHVDVLNS 60

Query: 433 AFSPFESHRATTKSALHVLSQLSKDEGHADTMVNCGAVPVLVRILQNAARDDADGVTDPY 254
            FS  E+ RA  K A ++LSQ +K+E   + +V+CGAVP LV+ L+       +    P 
Sbjct: 61  TFSSLEADRAAAKRAANLLSQFAKNEEIVNLIVDCGAVPALVKHLRAPTPSRGESGPKPN 120

Query: 253 KYEVEKACAFILGFLAIK 200
           ++EVEK  AF LG LA+K
Sbjct: 121 EHEVEKGSAFALGLLAVK 138


>ref|XP_002873941.1| armadillo/beta-catenin repeat family protein [Arabidopsis lyrata
           subsp. lyrata] gi|297319778|gb|EFH50200.1|
           armadillo/beta-catenin repeat family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 710

 Score = 82.4 bits (202), Expect = 6e-14
 Identities = 51/128 (39%), Positives = 74/128 (57%)
 Frame = -3

Query: 583 PRTRCLKRKLDQQDYSTEEDQRDRKCKVLLLDHPHDIPTEIHNHLALLDSAFSPFESHRA 404
           P  +  KRKL++   + E    DR+   +  D    + TE+   +++L+SAFS  ES RA
Sbjct: 14  PERKGQKRKLEEGAAAVE----DRQISAVTTDGGQALLTEVAAQVSVLNSAFSWQESDRA 69

Query: 403 TTKSALHVLSQLSKDEGHADTMVNCGAVPVLVRILQNAARDDADGVTDPYKYEVEKACAF 224
             K A  VL++L+K+E   + +V+ GAVP L+  LQ    +D D    PY++EVEK  AF
Sbjct: 70  AAKRATQVLAELAKNEDLVNVIVDGGAVPALMTHLQAPPYNDGDLAEKPYEHEVEKGSAF 129

Query: 223 ILGFLAIK 200
            LG LAIK
Sbjct: 130 ALGLLAIK 137


>ref|XP_004134143.1| PREDICTED: ARM REPEAT PROTEIN INTERACTING WITH ABF2-like [Cucumis
           sativus]
          Length = 703

 Score = 81.6 bits (200), Expect = 9e-14
 Identities = 52/133 (39%), Positives = 76/133 (57%), Gaps = 1/133 (0%)
 Frame = -3

Query: 595 MDHN-PRTRCLKRKLDQQDYSTEEDQRDRKCKVLLLDHPHDIPTEIHNHLALLDSAFSPF 419
           +D N P  +  KRKL+      EE + +R+  V   D    I TE+ + + +L+S FS  
Sbjct: 7   LDQNLPERKGHKRKLE------EEFEEEREISVPTGDAKQAILTEVSDQVEILNSTFSWK 60

Query: 418 ESHRATTKSALHVLSQLSKDEGHADTMVNCGAVPVLVRILQNAARDDADGVTDPYKYEVE 239
           E+ RA  K A HVL++L+K+E   + +V  GAVP LV+ LQ     + D    P+++EVE
Sbjct: 61  EADRAAAKRATHVLAELAKNEEVVNVIVEGGAVPALVKHLQAPPTIEGDRSLKPFEHEVE 120

Query: 238 KACAFILGFLAIK 200
           K  AF LG LA+K
Sbjct: 121 KGSAFALGLLAVK 133


>ref|NP_850852.1| ARM repeat protein interacting with ABF2 [Arabidopsis thaliana]
           gi|325529999|sp|B9DHT4.2|ARIA_ARATH RecName: Full=ARM
           REPEAT PROTEIN INTERACTING WITH ABF2; Short=ARIA
           gi|332005303|gb|AED92686.1| ARM repeat protein
           interacting with ABF2 [Arabidopsis thaliana]
          Length = 710

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 50/128 (39%), Positives = 74/128 (57%)
 Frame = -3

Query: 583 PRTRCLKRKLDQQDYSTEEDQRDRKCKVLLLDHPHDIPTEIHNHLALLDSAFSPFESHRA 404
           P  +  KRKL++   + E    DR+   +  D    + +E+   +++L+SAFS  ES RA
Sbjct: 14  PERKGQKRKLEEGAAAVE----DREISAVSTDGGQALLSEVAAQVSVLNSAFSWQESDRA 69

Query: 403 TTKSALHVLSQLSKDEGHADTMVNCGAVPVLVRILQNAARDDADGVTDPYKYEVEKACAF 224
             K A  VL++L+K+E   + +V+ GAVP L+  LQ    +D D    PY++EVEK  AF
Sbjct: 70  AAKRATQVLAELAKNEDLVNVIVDGGAVPALMTHLQAPPYNDGDLAEKPYEHEVEKGSAF 129

Query: 223 ILGFLAIK 200
            LG LAIK
Sbjct: 130 ALGLLAIK 137


>ref|XP_002314713.1| predicted protein [Populus trichocarpa] gi|222863753|gb|EEF00884.1|
           predicted protein [Populus trichocarpa]
          Length = 693

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 51/134 (38%), Positives = 77/134 (57%), Gaps = 6/134 (4%)
 Frame = -3

Query: 583 PRTRCLKRKLDQQDYSTEEDQRDRKCKVLLLDHPHD-----IPTEIHNHLALLDSAFSPF 419
           P  +  KRKL+++    EE+QR+          P+      I  E++  + +L+S FS  
Sbjct: 12  PERKGQKRKLEEE---IEEEQREISAVEEAAAAPYGEARKVILNEVYAQVNILNSTFSWD 68

Query: 418 ESHRATTKSALHVLSQLSKDEGHADTMVNCGAVPVLVRILQNAARDDAD-GVTDPYKYEV 242
           E+HRAT K A HVL++L+K+E   + +V  GAVP LV+ LQ     + D   + P+++EV
Sbjct: 69  EAHRATAKRATHVLAELAKNEEVVNLIVEGGAVPALVKHLQVPPSSEIDHDNSKPFEHEV 128

Query: 241 EKACAFILGFLAIK 200
           EK  AF LG LA+K
Sbjct: 129 EKGSAFALGLLAVK 142


Top