BLASTX nr result

ID: Glycyrrhiza24_contig00021207 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00021207
         (1128 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK40428.1| unknown [Lotus japonicus]                              376   e-102
ref|NP_001240965.1| uncharacterized protein LOC100781449 [Glycin...   368   2e-99
ref|XP_003588536.1| Rhomboid family protein (ISS) [Medicago trun...   362   1e-97
ref|XP_002516572.1| conserved hypothetical protein [Ricinus comm...   342   1e-91
emb|CBI20892.3| unnamed protein product [Vitis vinifera]              341   2e-91

>gb|AFK40428.1| unknown [Lotus japonicus]
          Length = 284

 Score =  376 bits (965), Expect = e-102
 Identities = 190/260 (73%), Positives = 209/260 (80%), Gaps = 3/260 (1%)
 Frame = +1

Query: 46  MAQVQLQLGGMQAFKFHSTCKLTHLHXXXXXXXXXXXXXXXXKPPFSLSHHSLFMLRSRY 225
           MAQ+ + LGGM A+KF                          +     SHHSL +LR R 
Sbjct: 1   MAQLSVGLGGMSAYKFQLHIPFYSSFSSISIPIPPFNIKPFTRTALRHSHHSLSLLRFRS 60

Query: 226 PTSCNK---SDMISQLEVGKPELKKEPEKRVNGIFWVILLNIGIFVADHFFQVNGIKDLY 396
           PT C+K   SD++ QLE+GKPE K++PEKR +GIFWVILLNIGIFVAD FFQVNGIK +Y
Sbjct: 61  PTHCSKIKNSDLVPQLELGKPENKRKPEKRASGIFWVILLNIGIFVADKFFQVNGIKAMY 120

Query: 397 LYHNWPAWYQFVTATFCHANWKHLSSNLFFLYIFGKLVEEEGGSFALWLSYILTGVGANL 576
           LYHN P+WYQFVTATFCHANWKHLSSNLFFLYI GKLVEEE G+FALWL YILTGVGANL
Sbjct: 121 LYHNRPSWYQFVTATFCHANWKHLSSNLFFLYISGKLVEEEEGNFALWLCYILTGVGANL 180

Query: 577 VSWLVLPRNTISVGASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVVEKVMEAAQAST 756
           VSWL+LPR+ +SVGASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVVEKVMEAAQAST
Sbjct: 181 VSWLILPRDIVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVVEKVMEAAQAST 240

Query: 757 SLSGTFRGGYSLQSVNHIAH 816
           SL+GTFRGGYSLQSVNHIAH
Sbjct: 241 SLTGTFRGGYSLQSVNHIAH 260


>ref|NP_001240965.1| uncharacterized protein LOC100781449 [Glycine max]
           gi|255635279|gb|ACU17993.1| unknown [Glycine max]
          Length = 281

 Score =  368 bits (944), Expect = 2e-99
 Identities = 186/251 (74%), Positives = 204/251 (81%), Gaps = 9/251 (3%)
 Frame = +1

Query: 91  FHSTCKLTHLHXXXXXXXXXXXXXXXXKPPFSLS----HHSLFMLRSRYPT-----SCNK 243
           F  +CK +H+H                KP  +      HH L  L   + T     + NK
Sbjct: 9   FKLSCKPSHIHALKPFHSLPPLRTFTPKPSLNAKSHHHHHPLLTLLRSHRTLAPCCNSNK 68

Query: 244 SDMISQLEVGKPELKKEPEKRVNGIFWVILLNIGIFVADHFFQVNGIKDLYLYHNWPAWY 423
           SD++SQLE+GKPE K +PEKRVNGIFW+ILLNI IFVADHFF+VNGIK LYLYHNWP+WY
Sbjct: 69  SDIMSQLELGKPEQKGKPEKRVNGIFWIILLNIAIFVADHFFRVNGIKALYLYHNWPSWY 128

Query: 424 QFVTATFCHANWKHLSSNLFFLYIFGKLVEEEGGSFALWLSYILTGVGANLVSWLVLPRN 603
           QFVTATFCHANWKHLSSNLFFLYIFGKLVEEE G+FALWLSYILTGVGANLVSWLVLPRN
Sbjct: 129 QFVTATFCHANWKHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGVGANLVSWLVLPRN 188

Query: 604 TISVGASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVVEKVMEAAQASTSLSGTFRGG 783
           T+SVGASGAVFGLF+ISVLVKMSWDWRKILEVLILGQFV+EKVMEAAQASTSLSG  RGG
Sbjct: 189 TVSVGASGAVFGLFSISVLVKMSWDWRKILEVLILGQFVIEKVMEAAQASTSLSG--RGG 246

Query: 784 YSLQSVNHIAH 816
           Y+LQSVNHIAH
Sbjct: 247 YALQSVNHIAH 257


>ref|XP_003588536.1| Rhomboid family protein (ISS) [Medicago truncatula]
           gi|355477584|gb|AES58787.1| Rhomboid family protein
           (ISS) [Medicago truncatula]
          Length = 302

 Score =  362 bits (928), Expect = 1e-97
 Identities = 187/232 (80%), Positives = 197/232 (84%), Gaps = 22/232 (9%)
 Frame = +1

Query: 187 LSHHSLFMLRSRYPTSCN----KSDMISQLEVGKPEL-KKEPEKRVNGIFWVILLNIGIF 351
           LSHHSLF L S   T CN    KSDMISQLEV KPEL K+EP KRVNGIFW+ILLNIGIF
Sbjct: 47  LSHHSLFNLPSPSLTLCNNNNNKSDMISQLEVAKPELNKREPVKRVNGIFWIILLNIGIF 106

Query: 352 VADHFFQVNGIKDLYLYHNWPAWYQFVTATFCHANWKHLSSNLFFLYIFGK--------- 504
           VADHFFQV GIK LYL+H+ P W+QF+TATFCHANWKHLSSNLFFLYIFGK         
Sbjct: 107 VADHFFQVGGIKALYLFHSRPDWFQFLTATFCHANWKHLSSNLFFLYIFGKAVIRMNVCY 166

Query: 505 --------LVEEEGGSFALWLSYILTGVGANLVSWLVLPRNTISVGASGAVFGLFTISVL 660
                   LVEEEGGSFALWLSYILTGVGANLVSWL+LPRNT+SVGASGAVFGLFTISVL
Sbjct: 167 FVAFATGKLVEEEGGSFALWLSYILTGVGANLVSWLILPRNTVSVGASGAVFGLFTISVL 226

Query: 661 VKMSWDWRKILEVLILGQFVVEKVMEAAQASTSLSGTFRGGYSLQSVNHIAH 816
           VKMSWDWRKILEVLILGQFVVEKVMEAAQASTSL GTFRGGY+LQ+VNHIAH
Sbjct: 227 VKMSWDWRKILEVLILGQFVVEKVMEAAQASTSLPGTFRGGYALQNVNHIAH 278


>ref|XP_002516572.1| conserved hypothetical protein [Ricinus communis]
           gi|223544392|gb|EEF45913.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 308

 Score =  342 bits (876), Expect = 1e-91
 Identities = 173/258 (67%), Positives = 199/258 (77%)
 Frame = +1

Query: 43  RMAQVQLQLGGMQAFKFHSTCKLTHLHXXXXXXXXXXXXXXXXKPPFSLSHHSLFMLRSR 222
           +M Q+QLQ   +    + STC     H                 PP  L   S   L SR
Sbjct: 19  KMGQLQLQQLSLVKPSYSSTCVPMASHIRPFSMSLPKTNFPAY-PPCLLP--SFPALHSR 75

Query: 223 YPTSCNKSDMISQLEVGKPELKKEPEKRVNGIFWVILLNIGIFVADHFFQVNGIKDLYLY 402
           +    + SDMI  LE+ KPE +++P+K+ NGIFW+ILLN+GI+VADHFFQV GIK LYLY
Sbjct: 76  FVCKMSGSDMIRPLELDKPEGRRKPQKQANGIFWIILLNLGIYVADHFFQVRGIKSLYLY 135

Query: 403 HNWPAWYQFVTATFCHANWKHLSSNLFFLYIFGKLVEEEGGSFALWLSYILTGVGANLVS 582
           HN P WYQF++ATFCHA+W+HLSSNLFFLYIFGKLVEEE G+FALWLSYILTGVGANLVS
Sbjct: 136 HNRPTWYQFISATFCHASWEHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGVGANLVS 195

Query: 583 WLVLPRNTISVGASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVVEKVMEAAQASTSL 762
           WLVLPRN +SVGASGAVFGLF ISVLVK++WDWRKILEVLILGQFV+EKVMEAAQAS +L
Sbjct: 196 WLVLPRNAVSVGASGAVFGLFAISVLVKITWDWRKILEVLILGQFVIEKVMEAAQASAAL 255

Query: 763 SGTFRGGYSLQSVNHIAH 816
           SGTFRGGY +QSVNHIAH
Sbjct: 256 SGTFRGGYPMQSVNHIAH 273


>emb|CBI20892.3| unnamed protein product [Vitis vinifera]
          Length = 293

 Score =  341 bits (874), Expect = 2e-91
 Identities = 161/200 (80%), Positives = 178/200 (89%)
 Frame = +1

Query: 217 SRYPTSCNKSDMISQLEVGKPELKKEPEKRVNGIFWVILLNIGIFVADHFFQVNGIKDLY 396
           SR+    N SD+ SQ+E+GK   K +P+++VNGIFW+ILLN+GIFVADH FQV  IK LY
Sbjct: 57  SRFVCKMNGSDLTSQMELGKSGGKWKPQRQVNGIFWIILLNLGIFVADHLFQVRAIKTLY 116

Query: 397 LYHNWPAWYQFVTATFCHANWKHLSSNLFFLYIFGKLVEEEGGSFALWLSYILTGVGANL 576
           LYHNWPAWYQFVTATFCHANW HLSSNLFFLYIFG+LVEEE G+F LWLSYILTG GANL
Sbjct: 117 LYHNWPAWYQFVTATFCHANWNHLSSNLFFLYIFGRLVEEEEGNFGLWLSYILTGAGANL 176

Query: 577 VSWLVLPRNTISVGASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVVEKVMEAAQAST 756
           VSWLVLPRN +SVGASGAVFGLF ISVLVK+SWDWRKILEVLILGQFV+EKVMEAAQAST
Sbjct: 177 VSWLVLPRNAVSVGASGAVFGLFAISVLVKISWDWRKILEVLILGQFVIEKVMEAAQAST 236

Query: 757 SLSGTFRGGYSLQSVNHIAH 816
            LSGTF GGYS+QS+NHIAH
Sbjct: 237 GLSGTFLGGYSIQSINHIAH 256


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