BLASTX nr result

ID: Glycyrrhiza24_contig00021205 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00021205
         (249 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266665.2| PREDICTED: LOW QUALITY PROTEIN: DNA repair p...   119   3e-25
emb|CAN60638.1| hypothetical protein VITISV_022224 [Vitis vinifera]   119   3e-25
ref|XP_004166115.1| PREDICTED: DNA repair protein RAD50-like, pa...   116   2e-24
ref|XP_004133980.1| PREDICTED: DNA repair protein RAD50-like [Cu...   116   2e-24
ref|XP_003552170.1| PREDICTED: DNA repair protein RAD50-like [Gl...   106   2e-21

>ref|XP_002266665.2| PREDICTED: LOW QUALITY PROTEIN: DNA repair protein RAD50-like [Vitis
            vinifera]
          Length = 1316

 Score =  119 bits (297), Expect = 3e-25
 Identities = 60/82 (73%), Positives = 67/82 (81%)
 Frame = +2

Query: 2    KLREEQRYMENDLSNIQIRWHTLREEKVKAANTLQDVKXXXXXXXXXXXXKAQVDLDEKS 181
            KLR+EQRYMENDLSNIQIRWHTLREEKVKAANTL+DVK            K+QVDL EK 
Sbjct: 862  KLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKKAEEELDRLVEEKSQVDLHEKH 921

Query: 182  LAEALGPLSKHKDKLLADHNEL 247
            LAEALGPLSK K+KLL+D+N+L
Sbjct: 922  LAEALGPLSKEKEKLLSDYNDL 943


>emb|CAN60638.1| hypothetical protein VITISV_022224 [Vitis vinifera]
          Length = 527

 Score =  119 bits (297), Expect = 3e-25
 Identities = 60/82 (73%), Positives = 67/82 (81%)
 Frame = +2

Query: 2   KLREEQRYMENDLSNIQIRWHTLREEKVKAANTLQDVKXXXXXXXXXXXXKAQVDLDEKS 181
           KLR+EQRYMENDLSNIQIRWHTLREEKVKAANTL+DVK            K+QVDL EK 
Sbjct: 273 KLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKKAEEELDRLVEEKSQVDLHEKH 332

Query: 182 LAEALGPLSKHKDKLLADHNEL 247
           LAEALGPLSK K+KLL+D+N+L
Sbjct: 333 LAEALGPLSKEKEKLLSDYNDL 354


>ref|XP_004166115.1| PREDICTED: DNA repair protein RAD50-like, partial [Cucumis sativus]
          Length = 1088

 Score =  116 bits (291), Expect = 2e-24
 Identities = 60/82 (73%), Positives = 65/82 (79%)
 Frame = +2

Query: 2   KLREEQRYMENDLSNIQIRWHTLREEKVKAANTLQDVKXXXXXXXXXXXXKAQVDLDEKS 181
           KLR+EQRYMENDL+NIQIRWHTLREEKVKAANTL+DV+            K QVDLDEK 
Sbjct: 634 KLRDEQRYMENDLANIQIRWHTLREEKVKAANTLRDVRKAEEELDRLTEEKGQVDLDEKH 693

Query: 182 LAEALGPLSKHKDKLLADHNEL 247
           LAEAL PLSK KDKLL D+NEL
Sbjct: 694 LAEALIPLSKEKDKLLNDYNEL 715


>ref|XP_004133980.1| PREDICTED: DNA repair protein RAD50-like [Cucumis sativus]
          Length = 1316

 Score =  116 bits (291), Expect = 2e-24
 Identities = 60/82 (73%), Positives = 65/82 (79%)
 Frame = +2

Query: 2    KLREEQRYMENDLSNIQIRWHTLREEKVKAANTLQDVKXXXXXXXXXXXXKAQVDLDEKS 181
            KLR+EQRYMENDL+NIQIRWHTLREEKVKAANTL+DV+            K QVDLDEK 
Sbjct: 862  KLRDEQRYMENDLANIQIRWHTLREEKVKAANTLRDVRKAEEELDRLTEEKGQVDLDEKH 921

Query: 182  LAEALGPLSKHKDKLLADHNEL 247
            LAEAL PLSK KDKLL D+NEL
Sbjct: 922  LAEALIPLSKEKDKLLNDYNEL 943


>ref|XP_003552170.1| PREDICTED: DNA repair protein RAD50-like [Glycine max]
          Length = 1316

 Score =  106 bits (265), Expect = 2e-21
 Identities = 53/82 (64%), Positives = 61/82 (74%)
 Frame = +2

Query: 2    KLREEQRYMENDLSNIQIRWHTLREEKVKAANTLQDVKXXXXXXXXXXXXKAQVDLDEKS 181
            +L++EQRYME DLS+IQ+RWHT+REEK KA N LQ VK            K QVDLDEK 
Sbjct: 862  RLKDEQRYMEKDLSSIQMRWHTVREEKTKATNILQGVKRLEEELERLTEEKTQVDLDEKH 921

Query: 182  LAEALGPLSKHKDKLLADHNEL 247
            LA+ALGPLSK  DKLLA+HNEL
Sbjct: 922  LADALGPLSKETDKLLANHNEL 943


Top