BLASTX nr result

ID: Glycyrrhiza24_contig00021203 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00021203
         (511 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003516776.1| PREDICTED: uncharacterized protein LOC100780...   303   1e-80
ref|XP_003636002.1| Gamma-tubulin complex component [Medicago tr...   256   2e-66
emb|CBI21631.3| unnamed protein product [Vitis vinifera]              246   1e-63
ref|XP_002273254.1| PREDICTED: uncharacterized protein LOC100255...   246   1e-63
ref|XP_002515845.1| gamma-tubulin complex component, putative [R...   243   1e-62

>ref|XP_003516776.1| PREDICTED: uncharacterized protein LOC100780017 [Glycine max]
          Length = 1179

 Score =  303 bits (776), Expect = 1e-80
 Identities = 143/161 (88%), Positives = 153/161 (95%)
 Frame = +3

Query: 3    GHLNILIKMRHQISHFVSALQQYVESQLSHVSWCRFLHSLQHKVKDMMDLESVHMEYLAD 182
            GHLN+L+KMRHQI+HFVS LQQYVESQLSHVSWCRFLHSLQHKVKDMMDLESVHMEYLAD
Sbjct: 1008 GHLNMLMKMRHQINHFVSTLQQYVESQLSHVSWCRFLHSLQHKVKDMMDLESVHMEYLAD 1067

Query: 183  SLCICFLSDETTAVGSIIESILQCAVDFRSCLTVGVWDTGSDQGNLLGKLSTINISQVLS 362
            SLCICFLSDET AVGSIIESILQCA+DFRSC+TVG WD+GSD  +LLGKLS INISQVLS
Sbjct: 1068 SLCICFLSDETKAVGSIIESILQCALDFRSCITVGSWDSGSDPEDLLGKLSKINISQVLS 1127

Query: 363  IKQKFDRSLNDLHVCYIKEPKHGNFGLSRFWEYLNYNEYYS 485
            IKQKFDRSL +LH+CYIK PKHGNFGLSRFW+YLNYNEYYS
Sbjct: 1128 IKQKFDRSLKELHICYIKGPKHGNFGLSRFWDYLNYNEYYS 1168


>ref|XP_003636002.1| Gamma-tubulin complex component [Medicago truncatula]
            gi|355501937|gb|AES83140.1| Gamma-tubulin complex
            component [Medicago truncatula]
          Length = 1206

 Score =  256 bits (653), Expect = 2e-66
 Identities = 138/199 (69%), Positives = 149/199 (74%), Gaps = 38/199 (19%)
 Frame = +3

Query: 3    GHLNILIKMR--------------------HQISHFVSALQQYVESQLSHVSWCRFLHSL 122
            GHLNIL+KMR                    HQISHFVS LQQYVESQLSHVSWCRFLHSL
Sbjct: 1002 GHLNILMKMRYMYWIFFGKSGTMNYVFYDRHQISHFVSTLQQYVESQLSHVSWCRFLHSL 1061

Query: 123  QHKVKDMMDLESVHMEYLADSLCICFLSDETTAVGSIIESILQCAVDFRSCLTVGVWDTG 302
            QHKVKDMMDLESVH EYLADSL ICFLSDET AVGSIIESILQCA+DFRSCLT+     G
Sbjct: 1062 QHKVKDMMDLESVHTEYLADSLSICFLSDETKAVGSIIESILQCALDFRSCLTI-----G 1116

Query: 303  SDQGNLLGKLSTINIS------------------QVLSIKQKFDRSLNDLHVCYIKEPKH 428
            + +G+ LG+LSTINIS                  QVLSIKQKF+RSLN+LHVCY+KEP+H
Sbjct: 1117 ACRGD-LGELSTINISQLMGTKYWILTPAVSNYFQVLSIKQKFERSLNELHVCYVKEPRH 1175

Query: 429  GNFGLSRFWEYLNYNEYYS 485
             NFGLSRFWEYLNYNEYYS
Sbjct: 1176 VNFGLSRFWEYLNYNEYYS 1194


>emb|CBI21631.3| unnamed protein product [Vitis vinifera]
          Length = 1043

 Score =  246 bits (629), Expect = 1e-63
 Identities = 114/160 (71%), Positives = 134/160 (83%)
 Frame = +3

Query: 6    HLNILIKMRHQISHFVSALQQYVESQLSHVSWCRFLHSLQHKVKDMMDLESVHMEYLADS 185
            HL+ILIK RHQ++HFVS LQQYV+S LSHVSWCRFL SL HKVKDMMDLESVHM YL DS
Sbjct: 875  HLHILIKTRHQVNHFVSTLQQYVQSHLSHVSWCRFLQSLNHKVKDMMDLESVHMTYLMDS 934

Query: 186  LCICFLSDETTAVGSIIESILQCAVDFRSCLTVGVWDTGSDQGNLLGKLSTINISQVLSI 365
            L +CFLSD T +V ++IESILQCAVDFR CLT   W+   DQG++  KLS INI+QVL+I
Sbjct: 935  LHVCFLSDATRSVATVIESILQCAVDFRFCLTGCTWEVKQDQGDVFSKLSQINITQVLAI 994

Query: 366  KQKFDRSLNDLHVCYIKEPKHGNFGLSRFWEYLNYNEYYS 485
            K+ FD++L +L++CY+K PKHG FGLSRFW YLNYNEYYS
Sbjct: 995  KRAFDKNLKELYLCYLKSPKHGEFGLSRFWGYLNYNEYYS 1034


>ref|XP_002273254.1| PREDICTED: uncharacterized protein LOC100255993 [Vitis vinifera]
          Length = 1239

 Score =  246 bits (629), Expect = 1e-63
 Identities = 114/160 (71%), Positives = 134/160 (83%)
 Frame = +3

Query: 6    HLNILIKMRHQISHFVSALQQYVESQLSHVSWCRFLHSLQHKVKDMMDLESVHMEYLADS 185
            HL+ILIK RHQ++HFVS LQQYV+S LSHVSWCRFL SL HKVKDMMDLESVHM YL DS
Sbjct: 1071 HLHILIKTRHQVNHFVSTLQQYVQSHLSHVSWCRFLQSLNHKVKDMMDLESVHMTYLMDS 1130

Query: 186  LCICFLSDETTAVGSIIESILQCAVDFRSCLTVGVWDTGSDQGNLLGKLSTINISQVLSI 365
            L +CFLSD T +V ++IESILQCAVDFR CLT   W+   DQG++  KLS INI+QVL+I
Sbjct: 1131 LHVCFLSDATRSVATVIESILQCAVDFRFCLTGCTWEVKQDQGDVFSKLSQINITQVLAI 1190

Query: 366  KQKFDRSLNDLHVCYIKEPKHGNFGLSRFWEYLNYNEYYS 485
            K+ FD++L +L++CY+K PKHG FGLSRFW YLNYNEYYS
Sbjct: 1191 KRAFDKNLKELYLCYLKSPKHGEFGLSRFWGYLNYNEYYS 1230


>ref|XP_002515845.1| gamma-tubulin complex component, putative [Ricinus communis]
            gi|223545000|gb|EEF46514.1| gamma-tubulin complex
            component, putative [Ricinus communis]
          Length = 1209

 Score =  243 bits (620), Expect = 1e-62
 Identities = 111/152 (73%), Positives = 131/152 (86%)
 Frame = +3

Query: 30   RHQISHFVSALQQYVESQLSHVSWCRFLHSLQHKVKDMMDLESVHMEYLADSLCICFLSD 209
            R Q++HF+S LQQYV+SQLSH+SWCRFLH+L++KVKDMMDLESVHMEYL DSL ICFLSD
Sbjct: 1049 RQQVNHFISTLQQYVQSQLSHISWCRFLHNLKYKVKDMMDLESVHMEYLTDSLHICFLSD 1108

Query: 210  ETTAVGSIIESILQCAVDFRSCLTVGVWDTGSDQGNLLGKLSTINISQVLSIKQKFDRSL 389
            ET  V SIIESILQCA++FR+CLT  +WD G D+G L GKLS INISQVL+IKQKFD++L
Sbjct: 1109 ETRPVASIIESILQCALNFRACLTTSIWDVGLDEGGLRGKLSRINISQVLAIKQKFDKNL 1168

Query: 390  NDLHVCYIKEPKHGNFGLSRFWEYLNYNEYYS 485
             +LH+CY K PKHG FGL  FW +LNYNEYY+
Sbjct: 1169 KELHLCYHKSPKHGEFGLYCFWGHLNYNEYYT 1200


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