BLASTX nr result

ID: Glycyrrhiza24_contig00021192 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00021192
         (1551 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631052.1| ATP-dependent RNA helicase A-like protein [M...   390   e-106
ref|XP_003532529.1| PREDICTED: probable ATP-dependent RNA helica...   379   e-102
ref|XP_003524350.1| PREDICTED: probable ATP-dependent RNA helica...   373   e-101
ref|XP_004137549.1| PREDICTED: probable ATP-dependent RNA helica...   359   1e-96
ref|XP_004160445.1| PREDICTED: probable ATP-dependent RNA helica...   355   2e-95

>ref|XP_003631052.1| ATP-dependent RNA helicase A-like protein [Medicago truncatula]
            gi|355525074|gb|AET05528.1| ATP-dependent RNA helicase
            A-like protein [Medicago truncatula]
          Length = 1214

 Score =  390 bits (1003), Expect = e-106
 Identities = 198/256 (77%), Positives = 212/256 (82%)
 Frame = -2

Query: 1550 TMEDGQVLLYGNSVNAGVPKIPYPWLVFNEKVKVNSVFLRDSTGISDSMLLLFGGNISRG 1371
            TMEDGQVLLY NSVN  V KIPYPW+VFNEK+KVN+VFLRDSTGISDSMLLLFGGNIS+G
Sbjct: 960  TMEDGQVLLYANSVNGSVAKIPYPWIVFNEKIKVNTVFLRDSTGISDSMLLLFGGNISKG 1019

Query: 1370 GLDGHLKMLGGYLEFFMKPELAKTYLSLKRELEELIQRKLLDPMLDIQSHNELLSALRLL 1191
            GLDGHLKMLGGYLEFFMKPELAKTY +LKRELEEL+ +KL DPM DI SHNELLSA+RLL
Sbjct: 1020 GLDGHLKMLGGYLEFFMKPELAKTYSTLKRELEELVHKKLADPMFDIHSHNELLSAVRLL 1079

Query: 1190 VSEDHCDGRFVFGRQDLTQLKKKETNSKSGDGVGGDNSKNQLQTFLNRAGHGSPTYKTNQ 1011
            VSED+CDGRFV+G Q L QL KKET SKSGDG GGDNSKNQLQTFL+RAGH  PTYKT +
Sbjct: 1080 VSEDNCDGRFVYGHQVLPQL-KKETKSKSGDGAGGDNSKNQLQTFLSRAGHQLPTYKTQE 1138

Query: 1010 LKNNQFRSTVIFNGLNFVGQPCGSXXXXXXXXXXXAILWLKGDNIHSSGDIDHASVLLXX 831
            L+NNQFRSTVIFNGL+FVGQPC S           AILWLKGDN HSSGDIDHASVLL  
Sbjct: 1139 LRNNQFRSTVIFNGLDFVGQPCNSKKLAEKSAAAEAILWLKGDNTHSSGDIDHASVLLKK 1198

Query: 830  XXXXXXXXXXSGAKWS 783
                      S AKWS
Sbjct: 1199 RNKKSKKKSFSDAKWS 1214


>ref|XP_003532529.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Glycine
            max]
          Length = 1177

 Score =  379 bits (972), Expect = e-102
 Identities = 195/256 (76%), Positives = 210/256 (82%)
 Frame = -2

Query: 1550 TMEDGQVLLYGNSVNAGVPKIPYPWLVFNEKVKVNSVFLRDSTGISDSMLLLFGGNISRG 1371
            TMEDGQVLLY +SVN  V +IP+PWLVFNEKVKVNSVFLRDSTGISDS+LLLFGGN+SRG
Sbjct: 924  TMEDGQVLLYSSSVNGCVSRIPFPWLVFNEKVKVNSVFLRDSTGISDSVLLLFGGNVSRG 983

Query: 1370 GLDGHLKMLGGYLEFFMKPELAKTYLSLKRELEELIQRKLLDPMLDIQSHNELLSALRLL 1191
            GLDGHLKMLGGYLEFFMKPELAKTYLSLK ELEELIQ+KLLDPML+ QSH+ELLSA+RLL
Sbjct: 984  GLDGHLKMLGGYLEFFMKPELAKTYLSLKMELEELIQKKLLDPMLETQSHSELLSAVRLL 1043

Query: 1190 VSEDHCDGRFVFGRQDLTQLKKKETNSKSGDGVGGDNSKNQLQTFLNRAGHGSPTYKTNQ 1011
            VSEDHCDGRFVFGRQ L Q  KKETNSK+G G  G N KN LQ FLNRAGH SPTYKT +
Sbjct: 1044 VSEDHCDGRFVFGRQVLPQ-SKKETNSKTGGGAEGKNYKNHLQAFLNRAGHDSPTYKTKE 1102

Query: 1010 LKNNQFRSTVIFNGLNFVGQPCGSXXXXXXXXXXXAILWLKGDNIHSSGDIDHASVLLXX 831
            LKNNQFR+TV+FNGLNFVGQPC S           A+LW+KGD  HSS DIDHASVLL  
Sbjct: 1103 LKNNQFRTTVVFNGLNFVGQPCSSKKLAEKSAAAEALLWIKGDG-HSSDDIDHASVLLKK 1161

Query: 830  XXXXXXXXXXSGAKWS 783
                      SGAKWS
Sbjct: 1162 SNKKSRKNSFSGAKWS 1177


>ref|XP_003524350.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Glycine
            max]
          Length = 1180

 Score =  373 bits (957), Expect = e-101
 Identities = 195/256 (76%), Positives = 208/256 (81%)
 Frame = -2

Query: 1550 TMEDGQVLLYGNSVNAGVPKIPYPWLVFNEKVKVNSVFLRDSTGISDSMLLLFGGNISRG 1371
            TMEDGQVLLY +SVN  VP+IP+PWLVFNEKVKVNSVFLRDSTGISDS+LLLFGGN+SRG
Sbjct: 927  TMEDGQVLLYSSSVNGCVPRIPFPWLVFNEKVKVNSVFLRDSTGISDSVLLLFGGNVSRG 986

Query: 1370 GLDGHLKMLGGYLEFFMKPELAKTYLSLKRELEELIQRKLLDPMLDIQSHNELLSALRLL 1191
            GLDGHLKMLGGYLEFFMKPELAKTYLSLK  LEELIQ+KLLDPML+ QSH+ELLSA+RLL
Sbjct: 987  GLDGHLKMLGGYLEFFMKPELAKTYLSLKMGLEELIQKKLLDPMLETQSHSELLSAVRLL 1046

Query: 1190 VSEDHCDGRFVFGRQDLTQLKKKETNSKSGDGVGGDNSKNQLQTFLNRAGHGSPTYKTNQ 1011
            VSEDHCDGRFVFGRQ L Q  KKETNSK+G      N KN LQ FLNRAGH SPTYKT +
Sbjct: 1047 VSEDHCDGRFVFGRQVLPQ-SKKETNSKTGGVAEEKNYKNHLQAFLNRAGHDSPTYKTKE 1105

Query: 1010 LKNNQFRSTVIFNGLNFVGQPCGSXXXXXXXXXXXAILWLKGDNIHSSGDIDHASVLLXX 831
            LKNNQFRSTVIFNGLNFVGQPC S           A+LWLKGD+ HSS DIDHASVLL  
Sbjct: 1106 LKNNQFRSTVIFNGLNFVGQPCSSKKLAEKSAAAEALLWLKGDS-HSSDDIDHASVLLKK 1164

Query: 830  XXXXXXXXXXSGAKWS 783
                      S AKWS
Sbjct: 1165 SNKKSRKNSFSSAKWS 1180


>ref|XP_004137549.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Cucumis
            sativus]
          Length = 1168

 Score =  359 bits (921), Expect = 1e-96
 Identities = 183/260 (70%), Positives = 203/260 (78%), Gaps = 4/260 (1%)
 Frame = -2

Query: 1550 TMEDGQVLLYGNSVNAGVPKIPYPWLVFNEKVKVNSVFLRDSTGISDSMLLLFGGNISRG 1371
            TMEDGQV+LY NSVNAG PKIPYPWLVFNEKVKVNSVFLRDSTG+SDS+LLLFGGN+SRG
Sbjct: 909  TMEDGQVMLYSNSVNAGYPKIPYPWLVFNEKVKVNSVFLRDSTGVSDSVLLLFGGNVSRG 968

Query: 1370 GLDGHLKMLGGYLEFFMKPELAKTYLSLKRELEELIQRKLLDPMLDIQSHNELLSALRLL 1191
            GLDGHLKML GYLEFFMKP LA+TYLSLKREL+EL+ +KLL+P LD++ HNELL+ALRLL
Sbjct: 969  GLDGHLKMLDGYLEFFMKPALAETYLSLKRELDELVHQKLLNPKLDMEPHNELLTALRLL 1028

Query: 1190 VSEDHCDGRFVFGRQDLTQLKKKETNS----KSGDGVGGDNSKNQLQTFLNRAGHGSPTY 1023
            +SEDHC GRFVFGR      KK  T+S    K GDG GGDNSKNQLQT L RAGH +PTY
Sbjct: 1029 ISEDHCAGRFVFGRHMPVPSKKAMTDSLPRQKHGDGGGGDNSKNQLQTLLLRAGHETPTY 1088

Query: 1022 KTNQLKNNQFRSTVIFNGLNFVGQPCGSXXXXXXXXXXXAILWLKGDNIHSSGDIDHASV 843
             T QL+NNQFRSTVIFNGLNFVGQPCGS           A+LWL+G+   SS  IDHAS+
Sbjct: 1089 NTKQLRNNQFRSTVIFNGLNFVGQPCGSKKLAEKDAAAEALLWLQGETHSSSQAIDHASI 1148

Query: 842  LLXXXXXXXXXXXXSGAKWS 783
            LL              AKWS
Sbjct: 1149 LLKKSRKKNTNPSFHSAKWS 1168


>ref|XP_004160445.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Cucumis
            sativus]
          Length = 1231

 Score =  355 bits (910), Expect = 2e-95
 Identities = 179/242 (73%), Positives = 199/242 (82%), Gaps = 4/242 (1%)
 Frame = -2

Query: 1550 TMEDGQVLLYGNSVNAGVPKIPYPWLVFNEKVKVNSVFLRDSTGISDSMLLLFGGNISRG 1371
            TMEDGQV+LY NSVNAG PKIPYPWLVFNEKVKVNSVFLRDSTG+SDS+LLLFGGN+SRG
Sbjct: 956  TMEDGQVMLYSNSVNAGYPKIPYPWLVFNEKVKVNSVFLRDSTGVSDSVLLLFGGNVSRG 1015

Query: 1370 GLDGHLKMLGGYLEFFMKPELAKTYLSLKRELEELIQRKLLDPMLDIQSHNELLSALRLL 1191
            GLDGHLKML GYLEFFMKP LA+TYLSLKREL+EL+ +KLL+P LD++ HNELL+ALRLL
Sbjct: 1016 GLDGHLKMLDGYLEFFMKPALAETYLSLKRELDELVHQKLLNPKLDMEPHNELLTALRLL 1075

Query: 1190 VSEDHCDGRFVFGRQDLTQLKKKETNS----KSGDGVGGDNSKNQLQTFLNRAGHGSPTY 1023
            +SEDHC GRFVFGR      KK  T+S    K GDG GGDNSKNQLQT L RAGH +PTY
Sbjct: 1076 ISEDHCAGRFVFGRHMPVPSKKAMTDSLPRQKHGDGGGGDNSKNQLQTLLLRAGHETPTY 1135

Query: 1022 KTNQLKNNQFRSTVIFNGLNFVGQPCGSXXXXXXXXXXXAILWLKGDNIHSSGDIDHASV 843
             T QL+NNQFRSTVIFNGLNFVGQPCGS           A+LWL+G+   SS  IDHAS+
Sbjct: 1136 NTKQLRNNQFRSTVIFNGLNFVGQPCGSKKLAEKDAAAEALLWLQGETHSSSQAIDHASI 1195

Query: 842  LL 837
            LL
Sbjct: 1196 LL 1197


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