BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00021180
         (1514 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003545837.1| PREDICTED: DNA-directed RNA polymerase E sub...   356   8e-96
ref|XP_003541591.1| PREDICTED: DNA-directed RNA polymerase E sub...   342   2e-91
ref|XP_003627850.1| Protein DCL [Medicago truncatula] gi|3555218...   327   7e-87
ref|XP_003627838.1| DNA-directed RNA polymerase subunit [Medicag...   327   7e-87
ref|XP_002303926.1| predicted protein [Populus trichocarpa] gi|2...   231   5e-58

>ref|XP_003545837.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Glycine max]
          Length = 2098

 Score =  356 bits (914), Expect = 8e-96
 Identities = 190/341 (55%), Positives = 223/341 (65%), Gaps = 24/341 (7%)
 Frame = -3

Query: 1506 KPKANDWSTWGKNTDDIQDGGSSRPQEDSWSSGK-------------W---KAESNVGAD 1375
            K K+++WS+WGKN  +I  GGS   Q DSW SGK             W   KAE+  G  
Sbjct: 1764 KSKSSEWSSWGKNKSEIPAGGSENVQNDSWGSGKLEDDTQKENSGSAWVRNKAETIDGGS 1823

Query: 1374 V--MQDAWQHNSDNVKVNWEAKMSVDNCSWGKPKSPENKARDSQNESNQAASSRGWDSQI 1201
                +DAW         NW+A+  V N SWGKPKS E++A DS N+SNQ +SS+GW+S I
Sbjct: 1824 EKPQEDAWNSG------NWKAESKVGNASWGKPKSSESQAWDSHNQSNQNSSSQGWESHI 1877

Query: 1200 VSANSDGDRNYQWGKQGRESFKKNRYEGSQGWGSNAGDXXXXXXXXXXPGQRLDIYSSEE 1021
             SANS+ ++ +QWGKQGR+SFKKNR+EGSQG GSNAGD          PGQRLDIYSS E
Sbjct: 1878 ASANSESEKGFQWGKQGRDSFKKNRFEGSQGRGSNAGDWKNRNRPPRAPGQRLDIYSSGE 1937

Query: 1020 QDVLKDIEPXXXXXXXXXXXQGYNDGDPLAADDQHFVLENVFEHHPDKETKMGAGVDHVM 841
            QDVLKDIEP           QGYNDGDPLAA+DQ FVLENVFEHHPDKETKMG G+D+VM
Sbjct: 1938 QDVLKDIEPIMQSIRRIMQQQGYNDGDPLAAEDQLFVLENVFEHHPDKETKMGTGIDYVM 1997

Query: 840  VSRHSNFQDSRCFYVVLKDGKREDFSYRKCLDNLIRKKYPDIADSFIGKYFWKPRGRRDQ 661
            V++HS+FQ+SRCFYVV KDG+ +DFSYRKCL N I KKYPD+A+SF+GKYF KPR R DQ
Sbjct: 1998 VNKHSSFQESRCFYVVCKDGESKDFSYRKCLANYISKKYPDLAESFLGKYFRKPRARGDQ 2057

Query: 660  NQT---QNXXXXXXXXXXXXXXXAPVPVE---TNVPMETNE 556
              T                    A  P E   T  PMETNE
Sbjct: 2058 TATPGRDEAATPGEQTATPGRDEAATPAEQISTPTPMETNE 2098



 Score = 68.2 bits (165), Expect = 6e-09
 Identities = 44/141 (31%), Positives = 62/141 (43%), Gaps = 8/141 (5%)
 Frame = -3

Query: 1500 KANDWSTWGKNTDDIQDGGSSRPQEDSWSSGKWKAESNVGADVMQDAWQHN-SDNVKVNW 1324
            K+N+WS WG N  +I  GGS   QEDSW S KWKA+     +    AW  N +D  K   
Sbjct: 1458 KSNEWSAWGSNQSEIPAGGSKAVQEDSWGSSKWKADVAQEDNSRLGAWDANAADQTK--- 1514

Query: 1323 EAKMSVDNCSWGKPK--SPENKARDSQNESNQAASSR-----GWDSQIVSANSDGDRNYQ 1165
                S +   WGK K  + E+ +R    ++N A  ++     GW  +      D  R   
Sbjct: 1515 ----SSEWSGWGKKKDVTQEDNSRLGAWDANAADQTKSRDWSGWGKKKDITQEDNSRLGA 1570

Query: 1164 WGKQGRESFKKNRYEGSQGWG 1102
            W     +  K + +    GWG
Sbjct: 1571 WDANAADQTKSSEW---SGWG 1588


>ref|XP_003541591.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Glycine max]
          Length = 2020

 Score =  342 bits (877), Expect = 2e-91
 Identities = 176/303 (58%), Positives = 210/303 (69%), Gaps = 20/303 (6%)
 Frame = -3

Query: 1500 KANDWSTWGKNTDDIQDGGSSRPQEDSWSSGKW----KAESNVGA--DVMQDAWQHNSDN 1339
            K+++WS+WGKN  +I  GGS+  Q DSW  GK     K  S  GA  +    AW  N   
Sbjct: 1700 KSSEWSSWGKNKTEIPAGGSANVQNDSWGLGKLNDTQKDNSGCGAWGENSGSAWVRNKAE 1759

Query: 1338 V--------------KVNWEAKMSVDNCSWGKPKSPENKARDSQNESNQAASSRGWDSQI 1201
                             NW+A+  V N +WGKPKS E+ A DS N+SNQ +SS+GW+S I
Sbjct: 1760 TIDGGSEKPQEDAWNSGNWKAESKVGNTTWGKPKSSESHAWDSHNQSNQNSSSQGWESHI 1819

Query: 1200 VSANSDGDRNYQWGKQGRESFKKNRYEGSQGWGSNAGDXXXXXXXXXXPGQRLDIYSSEE 1021
             SANS+ ++ +QWGK GR+SFKKNR+EGSQG GSNAGD          PGQRLDIYSSEE
Sbjct: 1820 ASANSENEKGFQWGK-GRDSFKKNRFEGSQGRGSNAGDWKNRNRPPRAPGQRLDIYSSEE 1878

Query: 1020 QDVLKDIEPXXXXXXXXXXXQGYNDGDPLAADDQHFVLENVFEHHPDKETKMGAGVDHVM 841
            QDVLKDIEP           QGY+DGDPLAA+DQ FVLENVFEHHPDKETKMGAG+D+VM
Sbjct: 1879 QDVLKDIEPIMQSIRRIMQQQGYSDGDPLAAEDQLFVLENVFEHHPDKETKMGAGIDYVM 1938

Query: 840  VSRHSNFQDSRCFYVVLKDGKREDFSYRKCLDNLIRKKYPDIADSFIGKYFWKPRGRRDQ 661
            V++HS+FQ+SRCFYVV KDG+ +DFSYRKCL N I KKYPD+A+SF+GKYF KPR R DQ
Sbjct: 1939 VNKHSSFQESRCFYVVCKDGQSKDFSYRKCLANYISKKYPDLAESFLGKYFRKPRARGDQ 1998

Query: 660  NQT 652
              T
Sbjct: 1999 TAT 2001



 Score = 65.9 bits (159), Expect = 3e-08
 Identities = 51/165 (30%), Positives = 70/165 (42%), Gaps = 25/165 (15%)
 Frame = -3

Query: 1509 TKPKANDWSTWGKNTDDIQDGGSSRPQEDSWSSGKWKAESNVGADVMQDAWQHN-SDNVK 1333
            TK K+N+WS    N  +I  GGS   QEDSW S KWKA+     +    AW  N +D  K
Sbjct: 1587 TKTKSNEWSARVSNKSEIPAGGSKAVQEDSWGSSKWKADVAQEDNSRLGAWDANAADQTK 1646

Query: 1332 VN----WEAKMSV---DNC--SWGKPKSPENKARDSQNESNQAASSR---------GWDS 1207
             N    W  K  V   DN   SWG  K  +   ++  + S    ++R          W S
Sbjct: 1647 SNEWSGWGKKKDVTQEDNVQHSWGSGKRKDKVTQEDNSGSGDWGANRTDLAITKSSEWSS 1706

Query: 1206 ------QIVSANSDGDRNYQWGKQGRESFKKNRYEGSQGWGSNAG 1090
                  +I +  S   +N  WG  G+ +  +    G   WG N+G
Sbjct: 1707 WGKNKTEIPAGGSANVQNDSWG-LGKLNDTQKDNSGCGAWGENSG 1750


>ref|XP_003627850.1| Protein DCL [Medicago truncatula] gi|355521872|gb|AET02326.1| Protein
            DCL [Medicago truncatula]
          Length = 481

 Score =  327 bits (837), Expect = 7e-87
 Identities = 176/334 (52%), Positives = 211/334 (63%), Gaps = 45/334 (13%)
 Frame = -3

Query: 1512 ATKPKAND-WSTWGKNTDDI----QDGGSSRPQE-------DSW---------SSGKWKA 1396
            ATKPK+ND  S+WG+  D+I    +D   S   E       DSW         S GK K+
Sbjct: 86   ATKPKSNDNRSSWGQKKDEIHVMPEDSSRSNAWEQKPENVKDSWVAKVPVANSSWGKAKS 145

Query: 1395 ESNVGADVMQD------------------------AWQHNSDNVKVNWEAKMSVDNCSWG 1288
              N   D   +                        +W          W++K +  N SWG
Sbjct: 146  PENRPWDSKNEPNNSFGKPNSQENEPWDSKNESDSSWGKPKSQESQPWDSK-NESNSSWG 204

Query: 1287 KPKSPENKARDSQNESNQAASSRGWDSQIVSANSDGDRNYQWGKQGRESFKKNRYEGSQG 1108
            KPKS EN   DS+NESNQ A SRGWDSQ+ SANS+ D+++QWGKQGR+SFKKNR+EGSQ 
Sbjct: 205  KPKSQENHPWDSKNESNQTAGSRGWDSQVASANSESDKSFQWGKQGRDSFKKNRFEGSQS 264

Query: 1107 WGSNAGDXXXXXXXXXXPGQRLDIYSSEEQDVLKDIEPXXXXXXXXXXXQGYNDGDPLAA 928
             G NAGD          PGQR ++Y+ EEQD++KDIEP           QGYNDGDPLA 
Sbjct: 265  GGPNAGDWKNRSRPVRPPGQRFELYTPEEQDIMKDIEPIVQSIRRIMQLQGYNDGDPLAN 324

Query: 927  DDQHFVLENVFEHHPDKETKMGAGVDHVMVSRHSNFQDSRCFYVVLKDGKREDFSYRKCL 748
            +DQ +VLENVFEHHPDKETKMG GVDHVMVS+HSNFQDSRC YVVLKDGK+EDFSYRKCL
Sbjct: 325  EDQKYVLENVFEHHPDKETKMGVGVDHVMVSKHSNFQDSRCLYVVLKDGKKEDFSYRKCL 384

Query: 747  DNLIRKKYPDIADSFIGKYFWKPRGRRDQNQTQN 646
            +NL+RKKYP+ A+SF GKYF KP+ R  ++QT N
Sbjct: 385  ENLVRKKYPETAESFCGKYFRKPQPRVKRDQTPN 418


>ref|XP_003627838.1| DNA-directed RNA polymerase subunit [Medicago truncatula]
            gi|355521860|gb|AET02314.1| DNA-directed RNA polymerase
            subunit [Medicago truncatula]
          Length = 2032

 Score =  327 bits (837), Expect = 7e-87
 Identities = 176/334 (52%), Positives = 211/334 (63%), Gaps = 45/334 (13%)
 Frame = -3

Query: 1512 ATKPKAND-WSTWGKNTDDI----QDGGSSRPQE-------DSW---------SSGKWKA 1396
            ATKPK+ND  S+WG+  D+I    +D   S   E       DSW         S GK K+
Sbjct: 1637 ATKPKSNDNRSSWGQKKDEIHVMPEDSSRSNAWEQKPENVKDSWVAKVPVANSSWGKAKS 1696

Query: 1395 ESNVGADVMQD------------------------AWQHNSDNVKVNWEAKMSVDNCSWG 1288
              N   D   +                        +W          W++K +  N SWG
Sbjct: 1697 PENRPWDSKNEPNNSFGKPNSQENEPWDSKNESDSSWGKPKSQESQPWDSK-NESNSSWG 1755

Query: 1287 KPKSPENKARDSQNESNQAASSRGWDSQIVSANSDGDRNYQWGKQGRESFKKNRYEGSQG 1108
            KPKS EN   DS+NESNQ A SRGWDSQ+ SANS+ D+++QWGKQGR+SFKKNR+EGSQ 
Sbjct: 1756 KPKSQENHPWDSKNESNQTAGSRGWDSQVASANSESDKSFQWGKQGRDSFKKNRFEGSQS 1815

Query: 1107 WGSNAGDXXXXXXXXXXPGQRLDIYSSEEQDVLKDIEPXXXXXXXXXXXQGYNDGDPLAA 928
             G NAGD          PGQR ++Y+ EEQD++KDIEP           QGYNDGDPLA 
Sbjct: 1816 GGPNAGDWKNRSRPVRPPGQRFELYTPEEQDIMKDIEPIVQSIRRIMQLQGYNDGDPLAN 1875

Query: 927  DDQHFVLENVFEHHPDKETKMGAGVDHVMVSRHSNFQDSRCFYVVLKDGKREDFSYRKCL 748
            +DQ +VLENVFEHHPDKETKMG GVDHVMVS+HSNFQDSRC YVVLKDGK+EDFSYRKCL
Sbjct: 1876 EDQKYVLENVFEHHPDKETKMGVGVDHVMVSKHSNFQDSRCLYVVLKDGKKEDFSYRKCL 1935

Query: 747  DNLIRKKYPDIADSFIGKYFWKPRGRRDQNQTQN 646
            +NL+RKKYP+ A+SF GKYF KP+ R  ++QT N
Sbjct: 1936 ENLVRKKYPETAESFCGKYFRKPQPRVKRDQTPN 1969


>ref|XP_002303926.1| predicted protein [Populus trichocarpa] gi|222841358|gb|EEE78905.1|
            predicted protein [Populus trichocarpa]
          Length = 1020

 Score =  231 bits (588), Expect = 5e-58
 Identities = 131/308 (42%), Positives = 173/308 (56%), Gaps = 25/308 (8%)
 Frame = -3

Query: 1509 TKPKANDWSTWGKNTDDIQDGGSSRPQEDSWSSGKWKAESNVGADVMQDAWQHNSDNVKV 1330
            T  +A+  S WGK        G    +E      +W   ++ G +  +    +N++N  +
Sbjct: 705  TSNQADTASGWGKPKSSENSQGWGLSKESGKEVHEWGVPNSAGGNGSET--NNNNENQSL 762

Query: 1329 -------NWEAKMSVDN----CSWGKPKSPE-NKARDSQNESNQAASSRGWDSQIVSANS 1186
                    W+ K S +       WGKPKSP  ++   S  E  +A    GW        +
Sbjct: 763  VEQGKESGWDNKASSNQEGTASGWGKPKSPALSEGWGSPREPVKAV--HGWGVPNSGGGN 820

Query: 1185 DGDRNYQWGKQGRESFKKNRYEGSQGWGSNAGDXXXXXXXXXXPG-------------QR 1045
               R+ QWG+Q RE FKK+R+EGS+GWGSN GD          P              QR
Sbjct: 821  GSGRDQQWGQQSRE-FKKDRFEGSRGWGSNNGDWKNKRNRPSKPHEDLNASGIFTTTRQR 879

Query: 1044 LDIYSSEEQDVLKDIEPXXXXXXXXXXXQGYNDGDPLAADDQHFVLENVFEHHPDKETKM 865
            LD+++S+EQD+L DIEP            GYNDGDPL+ADDQ +VL+NVF +HPDK  KM
Sbjct: 880  LDVFTSQEQDILSDIEPLMLSIRRIMHQTGYNDGDPLSADDQSYVLDNVFHYHPDKAVKM 939

Query: 864  GAGVDHVMVSRHSNFQDSRCFYVVLKDGKREDFSYRKCLDNLIRKKYPDIADSFIGKYFW 685
            GAG+DHV VSRHSNFQ+SRCFY+V  DG ++DFSYRKCL+N I+ KYPD+AD FI KYF 
Sbjct: 940  GAGIDHVTVSRHSNFQESRCFYIVSTDGCKQDFSYRKCLENFIKGKYPDLADEFIAKYFA 999

Query: 684  KPRGRRDQ 661
            + RG R +
Sbjct: 1000 R-RGNRQR 1006