BLASTX nr result

ID: Glycyrrhiza24_contig00021170 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00021170
         (537 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003525614.1| PREDICTED: protein tipD-like [Glycine max]        145   5e-33
ref|XP_003549829.1| PREDICTED: protein tipD-like [Glycine max]        142   2e-32
ref|XP_002511279.1| Protein tipD, putative [Ricinus communis] gi...   132   4e-29
ref|XP_002321652.1| predicted protein [Populus trichocarpa] gi|2...   131   6e-29
ref|NP_199834.2| transducin/WD40 domain-containing protein [Arab...   128   6e-28

>ref|XP_003525614.1| PREDICTED: protein tipD-like [Glycine max]
          Length = 514

 Score =  145 bits (365), Expect = 5e-33
 Identities = 61/71 (85%), Positives = 69/71 (97%)
 Frame = +2

Query: 2   ASNWSRSCISPDDNHIAAGSADGSIYVWSTSRGDIVSTLKEHTSSILCCTWSGLGKPLAS 181
           ASNWSRSCISPDDNH+AAGSADGS+Y+WS S+GDIVSTLKEHTSS+LCC WSG+GKPLAS
Sbjct: 444 ASNWSRSCISPDDNHVAAGSADGSVYIWSISKGDIVSTLKEHTSSVLCCRWSGIGKPLAS 503

Query: 182 ADKNGVVCIWT 214
           ADKNG+VC+WT
Sbjct: 504 ADKNGIVCVWT 514


>ref|XP_003549829.1| PREDICTED: protein tipD-like [Glycine max]
          Length = 514

 Score =  142 bits (359), Expect = 2e-32
 Identities = 60/71 (84%), Positives = 68/71 (95%)
 Frame = +2

Query: 2   ASNWSRSCISPDDNHIAAGSADGSIYVWSTSRGDIVSTLKEHTSSILCCTWSGLGKPLAS 181
           ASNWSRSCISPDDNH+AAGSADGS+Y+WS S+GDIVSTLKEHTSS+LCC WSG+ KPLAS
Sbjct: 444 ASNWSRSCISPDDNHVAAGSADGSVYIWSISKGDIVSTLKEHTSSVLCCRWSGIAKPLAS 503

Query: 182 ADKNGVVCIWT 214
           ADKNG+VC+WT
Sbjct: 504 ADKNGIVCVWT 514


>ref|XP_002511279.1| Protein tipD, putative [Ricinus communis]
           gi|223550394|gb|EEF51881.1| Protein tipD, putative
           [Ricinus communis]
          Length = 520

 Score =  132 bits (331), Expect = 4e-29
 Identities = 55/71 (77%), Positives = 67/71 (94%)
 Frame = +2

Query: 2   ASNWSRSCISPDDNHIAAGSADGSIYVWSTSRGDIVSTLKEHTSSILCCTWSGLGKPLAS 181
           ASNWSRSCISPDDN++AAGSADGS+++WS ++ DIVSTLKEHTSS+LCC+WSGLGKPLA+
Sbjct: 450 ASNWSRSCISPDDNYVAAGSADGSVHIWSVAKADIVSTLKEHTSSVLCCSWSGLGKPLAT 509

Query: 182 ADKNGVVCIWT 214
           ADKNG++  WT
Sbjct: 510 ADKNGIIYTWT 520


>ref|XP_002321652.1| predicted protein [Populus trichocarpa] gi|222868648|gb|EEF05779.1|
           predicted protein [Populus trichocarpa]
          Length = 550

 Score =  131 bits (330), Expect = 6e-29
 Identities = 55/71 (77%), Positives = 67/71 (94%)
 Frame = +2

Query: 2   ASNWSRSCISPDDNHIAAGSADGSIYVWSTSRGDIVSTLKEHTSSILCCTWSGLGKPLAS 181
           ASNWSRSCISPDDN++AAGSADGS+++WS S+GDIVSTLKEHT+ +LCC+WSGLGKPLAS
Sbjct: 480 ASNWSRSCISPDDNYVAAGSADGSVHIWSISQGDIVSTLKEHTAPVLCCSWSGLGKPLAS 539

Query: 182 ADKNGVVCIWT 214
           +DKNG++  WT
Sbjct: 540 SDKNGIIYTWT 550


>ref|NP_199834.2| transducin/WD40 domain-containing protein [Arabidopsis thaliana]
           gi|40823395|gb|AAR92280.1| At5g50230 [Arabidopsis
           thaliana] gi|56381931|gb|AAV85684.1| At5g50230
           [Arabidopsis thaliana] gi|332008531|gb|AED95914.1|
           transducin/WD40 domain-containing protein [Arabidopsis
           thaliana]
          Length = 509

 Score =  128 bits (321), Expect = 6e-28
 Identities = 56/71 (78%), Positives = 65/71 (91%)
 Frame = +2

Query: 2   ASNWSRSCISPDDNHIAAGSADGSIYVWSTSRGDIVSTLKEHTSSILCCTWSGLGKPLAS 181
           ASNWSRSCISPDD+++AAGSADGS++VWS S+G+IVS LKE TS ILCC+WSG+GKPLAS
Sbjct: 439 ASNWSRSCISPDDDYVAAGSADGSVHVWSLSKGNIVSILKEQTSPILCCSWSGIGKPLAS 498

Query: 182 ADKNGVVCIWT 214
           ADKNG VC WT
Sbjct: 499 ADKNGYVCTWT 509


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