BLASTX nr result
ID: Glycyrrhiza24_contig00021162
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza24_contig00021162 (302 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003543846.1| PREDICTED: pleiotropic regulator 1-like [Gly... 86 4e-15 ref|XP_003554878.1| PREDICTED: nuclear distribution protein PAC1... 79 5e-13 ref|XP_002324039.1| f-box family protein [Populus trichocarpa] g... 57 2e-06 emb|CAN79923.1| hypothetical protein VITISV_042443 [Vitis vinifera] 55 6e-06 ref|XP_002277161.2| PREDICTED: ribosome assembly protein C18.05c... 55 8e-06 >ref|XP_003543846.1| PREDICTED: pleiotropic regulator 1-like [Glycine max] Length = 501 Score = 85.5 bits (210), Expect = 4e-15 Identities = 40/52 (76%), Positives = 43/52 (82%) Frame = -1 Query: 299 VDGCRIATASYCEDYGVLRFRDFNNATRPVTKLENEPPSKFWDSLSHGNSDD 144 VDGCRI TASY ED GVLRFRDFN+AT PVTKLENEP SKFW S+S + DD Sbjct: 450 VDGCRITTASYYEDLGVLRFRDFNHATNPVTKLENEPSSKFWISMSDDDRDD 501 >ref|XP_003554878.1| PREDICTED: nuclear distribution protein PAC1-like [Glycine max] Length = 452 Score = 78.6 bits (192), Expect = 5e-13 Identities = 39/54 (72%), Positives = 43/54 (79%), Gaps = 1/54 (1%) Frame = -1 Query: 302 AVDGCRIATASYCEDYGVLRFRDFNN-ATRPVTKLENEPPSKFWDSLSHGNSDD 144 AVDGCRI T SY ED GVL FRD+N+ AT PVTKLENEP SKFW S+S +SDD Sbjct: 399 AVDGCRITTTSYSEDSGVLCFRDYNHDATNPVTKLENEPSSKFWISMSDDDSDD 452 >ref|XP_002324039.1| f-box family protein [Populus trichocarpa] gi|222867041|gb|EEF04172.1| f-box family protein [Populus trichocarpa] Length = 498 Score = 56.6 bits (135), Expect = 2e-06 Identities = 28/52 (53%), Positives = 37/52 (71%) Frame = -1 Query: 302 AVDGCRIATASYCEDYGVLRFRDFNNATRPVTKLENEPPSKFWDSLSHGNSD 147 AV+G RI TASY E++G++ FRDF NAT V+K E+ SKFWD S+ + D Sbjct: 444 AVNGTRIVTASYGEEHGLVCFRDFFNATCAVSKREDVLASKFWDPQSYSDGD 495 >emb|CAN79923.1| hypothetical protein VITISV_042443 [Vitis vinifera] Length = 491 Score = 55.1 bits (131), Expect = 6e-06 Identities = 30/57 (52%), Positives = 38/57 (66%), Gaps = 4/57 (7%) Frame = -1 Query: 302 AVDGCRIATASYCEDYGVLRFRDFNNATRPVTKL-ENEPPSKFWDSLSHG---NSDD 144 A DGCRI TAS + G++ FRDF +AT PV+ E++P SKFWD +G NSDD Sbjct: 435 AADGCRIVTASCGTEDGLVWFRDFTDATCPVSSSHEDKPASKFWDPXCYGDTENSDD 491 >ref|XP_002277161.2| PREDICTED: ribosome assembly protein C18.05c [Vitis vinifera] Length = 494 Score = 54.7 bits (130), Expect = 8e-06 Identities = 30/57 (52%), Positives = 38/57 (66%), Gaps = 4/57 (7%) Frame = -1 Query: 302 AVDGCRIATASYCEDYGVLRFRDFNNATRPVTKL-ENEPPSKFWDSLSHG---NSDD 144 A DGCRI TAS + G++ FRDF +AT PV+ E++P SKFWD +G NSDD Sbjct: 438 AADGCRIVTASCGTEDGLVWFRDFTDATCPVSSSHEDKPASKFWDPQCYGDTENSDD 494