BLASTX nr result

ID: Glycyrrhiza24_contig00021162 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00021162
         (302 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003543846.1| PREDICTED: pleiotropic regulator 1-like [Gly...    86   4e-15
ref|XP_003554878.1| PREDICTED: nuclear distribution protein PAC1...    79   5e-13
ref|XP_002324039.1| f-box family protein [Populus trichocarpa] g...    57   2e-06
emb|CAN79923.1| hypothetical protein VITISV_042443 [Vitis vinifera]    55   6e-06
ref|XP_002277161.2| PREDICTED: ribosome assembly protein C18.05c...    55   8e-06

>ref|XP_003543846.1| PREDICTED: pleiotropic regulator 1-like [Glycine max]
          Length = 501

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 40/52 (76%), Positives = 43/52 (82%)
 Frame = -1

Query: 299 VDGCRIATASYCEDYGVLRFRDFNNATRPVTKLENEPPSKFWDSLSHGNSDD 144
           VDGCRI TASY ED GVLRFRDFN+AT PVTKLENEP SKFW S+S  + DD
Sbjct: 450 VDGCRITTASYYEDLGVLRFRDFNHATNPVTKLENEPSSKFWISMSDDDRDD 501


>ref|XP_003554878.1| PREDICTED: nuclear distribution protein PAC1-like [Glycine max]
          Length = 452

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 39/54 (72%), Positives = 43/54 (79%), Gaps = 1/54 (1%)
 Frame = -1

Query: 302 AVDGCRIATASYCEDYGVLRFRDFNN-ATRPVTKLENEPPSKFWDSLSHGNSDD 144
           AVDGCRI T SY ED GVL FRD+N+ AT PVTKLENEP SKFW S+S  +SDD
Sbjct: 399 AVDGCRITTTSYSEDSGVLCFRDYNHDATNPVTKLENEPSSKFWISMSDDDSDD 452


>ref|XP_002324039.1| f-box family protein [Populus trichocarpa]
           gi|222867041|gb|EEF04172.1| f-box family protein
           [Populus trichocarpa]
          Length = 498

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 28/52 (53%), Positives = 37/52 (71%)
 Frame = -1

Query: 302 AVDGCRIATASYCEDYGVLRFRDFNNATRPVTKLENEPPSKFWDSLSHGNSD 147
           AV+G RI TASY E++G++ FRDF NAT  V+K E+   SKFWD  S+ + D
Sbjct: 444 AVNGTRIVTASYGEEHGLVCFRDFFNATCAVSKREDVLASKFWDPQSYSDGD 495


>emb|CAN79923.1| hypothetical protein VITISV_042443 [Vitis vinifera]
          Length = 491

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 30/57 (52%), Positives = 38/57 (66%), Gaps = 4/57 (7%)
 Frame = -1

Query: 302 AVDGCRIATASYCEDYGVLRFRDFNNATRPVTKL-ENEPPSKFWDSLSHG---NSDD 144
           A DGCRI TAS   + G++ FRDF +AT PV+   E++P SKFWD   +G   NSDD
Sbjct: 435 AADGCRIVTASCGTEDGLVWFRDFTDATCPVSSSHEDKPASKFWDPXCYGDTENSDD 491


>ref|XP_002277161.2| PREDICTED: ribosome assembly protein C18.05c [Vitis vinifera]
          Length = 494

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 30/57 (52%), Positives = 38/57 (66%), Gaps = 4/57 (7%)
 Frame = -1

Query: 302 AVDGCRIATASYCEDYGVLRFRDFNNATRPVTKL-ENEPPSKFWDSLSHG---NSDD 144
           A DGCRI TAS   + G++ FRDF +AT PV+   E++P SKFWD   +G   NSDD
Sbjct: 438 AADGCRIVTASCGTEDGLVWFRDFTDATCPVSSSHEDKPASKFWDPQCYGDTENSDD 494


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