BLASTX nr result

ID: Glycyrrhiza24_contig00021160 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00021160
         (1098 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK33462.1| unknown [Medicago truncatula]                          323   6e-86
ref|XP_003624764.1| Presenilin [Medicago truncatula] gi|35750896...   320   5e-85
ref|XP_002530952.1| conserved hypothetical protein [Ricinus comm...   317   3e-84
ref|XP_003520917.1| PREDICTED: presenilin-like protein At1g08700...   314   3e-83
ref|XP_003554065.1| PREDICTED: presenilin-like protein At1g08700...   311   2e-82

>gb|AFK33462.1| unknown [Medicago truncatula]
          Length = 423

 Score =  323 bits (827), Expect = 6e-86
 Identities = 189/320 (59%), Positives = 208/320 (65%), Gaps = 15/320 (4%)
 Frame = -2

Query: 1097 GSIFLSLIQRFSLPLDSPTCFLLLLNFTVVGVLSIFSAAVPILLRQGYMVSLGIIVAAWF 918
            GSIF++LI+RFS+PLDS T F+ L NFT+VGVLS+F+ A+PI++RQ YMV LGI VAAWF
Sbjct: 114  GSIFINLIERFSIPLDSITFFIFLFNFTIVGVLSVFAEAIPIIVRQCYMVCLGIFVAAWF 173

Query: 917  TRLPEWTTWTXXXXXXXXXXXXXXAPGGPLKLLVDLASSRDEELPALVYEARPTVAPTGR 738
            T+LPEWTTWT              APGGPLKLLV+LASSR+EELPAL+YEARPTVAP  R
Sbjct: 174  TKLPEWTTWTLLVALALYDLVAVLAPGGPLKLLVELASSRNEELPALIYEARPTVAPNSR 233

Query: 737  XXXXXXXXXXXXXXXXXSDSETPRSIELQAVP---------PXXXXXXXXXXXXXRIID- 588
                               S      ELQ VP                        + D 
Sbjct: 234  AAAFGLFVAGVSEAQPTQSSSIELQ-ELQVVPIVNMNERDNDIHIEGGGGDDSVAGVEDF 292

Query: 587  -NEEEERSPLVGV----DEEMSPLVEVIXXXXXXXXXXXXXXXXXXXXXXXXXGIKLGLG 423
             N+E ERSPLVG     +EE SPLVEV+                          IKLGLG
Sbjct: 293  RNDEGERSPLVGNNGNREEERSPLVEVMGNERREPREREEFAERG---------IKLGLG 343

Query: 422  DFVFYSVLVGRAAMYDLMTVYACYLAIISGLGCTLILLSVCRRALPALPISITLGVLFYF 243
            DFVFYSVLVGRAAMYDLMTVYACYLAIISGLGCTLILLSVCR ALPALPISI LGVLFYF
Sbjct: 344  DFVFYSVLVGRAAMYDLMTVYACYLAIISGLGCTLILLSVCRHALPALPISIALGVLFYF 403

Query: 242  LTRLLMEPFIVGTATNLMMF 183
            LTRLLMEPFIVGTATNLMMF
Sbjct: 404  LTRLLMEPFIVGTATNLMMF 423


>ref|XP_003624764.1| Presenilin [Medicago truncatula] gi|357508963|ref|XP_003624770.1|
            Presenilin [Medicago truncatula]
            gi|355499779|gb|AES80982.1| Presenilin [Medicago
            truncatula] gi|355499785|gb|AES80988.1| Presenilin
            [Medicago truncatula]
          Length = 600

 Score =  320 bits (819), Expect = 5e-85
 Identities = 189/328 (57%), Positives = 209/328 (63%), Gaps = 15/328 (4%)
 Frame = -2

Query: 1097 GSIFLSLIQRFSLPLDSPTCFLLLLNFTVVGVLSIFSAAVPILLRQGYMVSLGIIVAAWF 918
            GSIF++LI+RFS+PLDS T F+ L NFT+VGVLS+F+ A+PI++RQ YMV LGI VAAWF
Sbjct: 114  GSIFINLIERFSIPLDSITFFIFLFNFTIVGVLSVFAEAIPIIVRQCYMVCLGIFVAAWF 173

Query: 917  TRLPEWTTWTXXXXXXXXXXXXXXAPGGPLKLLVDLASSRDEELPALVYEARPTVAPTGR 738
            T+LPEWTTWT              APGGPLKLLV+LASSR+EELPAL+YEARPTVAP  R
Sbjct: 174  TKLPEWTTWTLLVALALYDLVAVLAPGGPLKLLVELASSRNEELPALIYEARPTVAPNSR 233

Query: 737  XXXXXXXXXXXXXXXXXSDSETPRSIELQAVP---------PXXXXXXXXXXXXXRIID- 588
                               S      ELQ VP                        + D 
Sbjct: 234  AAAFGLFVAGVSEAQPTQSSSIELQ-ELQVVPIVNMNERDNDIHIEGGGGDDSVAGVEDF 292

Query: 587  -NEEEERSPLVGV----DEEMSPLVEVIXXXXXXXXXXXXXXXXXXXXXXXXXGIKLGLG 423
             N+E ERSPLVG     +EE SPLVEV+                          IKLGLG
Sbjct: 293  RNDEGERSPLVGNNGNREEERSPLVEVMGNERREPREREEFAERG---------IKLGLG 343

Query: 422  DFVFYSVLVGRAAMYDLMTVYACYLAIISGLGCTLILLSVCRRALPALPISITLGVLFYF 243
            DFVFYSVLVGRAAMYDLMTVYACYLAIISGLGCTLILLSVCR ALPALPISI LGVLFYF
Sbjct: 344  DFVFYSVLVGRAAMYDLMTVYACYLAIISGLGCTLILLSVCRHALPALPISIALGVLFYF 403

Query: 242  LTRLLMEPFIVGTATNLMMF*LFLKWHC 159
            LTRLLMEPFIVGTATNLM+     K  C
Sbjct: 404  LTRLLMEPFIVGTATNLMIIQTAFKDSC 431


>ref|XP_002530952.1| conserved hypothetical protein [Ricinus communis]
            gi|223529467|gb|EEF31424.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 455

 Score =  317 bits (813), Expect = 3e-84
 Identities = 186/346 (53%), Positives = 209/346 (60%), Gaps = 41/346 (11%)
 Frame = -2

Query: 1097 GSIFLSLIQRFSLPLDSPTCFLLLLNFTVVGVLSIFSAAVPILLRQGYMVSLGIIVAAWF 918
            GSIFLSLIQ FS+P+DS TCF++L NFT+VGVLS+F   +PI  RQGYMV+LGI VAAWF
Sbjct: 119  GSIFLSLIQHFSIPIDSVTCFIMLFNFTIVGVLSVFGGGIPIFFRQGYMVALGIFVAAWF 178

Query: 917  TRLPEWTTWTXXXXXXXXXXXXXXAPGGPLKLLVDLASSRDEELPALVYEARPTVAPTGR 738
            T+LPEWTTWT              APGGPLKLLV+LA SRDEELPALVYEARPTV+  G 
Sbjct: 179  TKLPEWTTWTVLVALAVYDLVAVLAPGGPLKLLVELAQSRDEELPALVYEARPTVSQNGN 238

Query: 737  XXXXXXXXXXXXXXXXXS--------------DSETPRSIELQAVPPXXXXXXXXXXXXX 600
                             S              +SE   + E  ++P              
Sbjct: 239  NQGRSLDLLVGGVSDSGSVEMQMVSNANRNRNESENRVNSEYTSIP------VRNVGNVE 292

Query: 599  RIIDNEEEERSPLVG---------------------------VDEEMSPLVEVIXXXXXX 501
             I + ++ ER PLVG                           VDEE SPLV+++      
Sbjct: 293  GIGNGDDSERFPLVGFSRERCSSSRESSEFSTMVGNRESDVAVDEETSPLVDMLRLGSER 352

Query: 500  XXXXXXXXXXXXXXXXXXXGIKLGLGDFVFYSVLVGRAAMYDLMTVYACYLAIISGLGCT 321
                                IKLGLGDFVFYSVLVGRAAMYDLMTVYACYLAIISGLGCT
Sbjct: 353  EQVRRDAPEDSMLASRG---IKLGLGDFVFYSVLVGRAAMYDLMTVYACYLAIISGLGCT 409

Query: 320  LILLSVCRRALPALPISITLGVLFYFLTRLLMEPFIVGTATNLMMF 183
            LILLSVCRRALPALPISITLG++FYFLTRLLMEPFIVGTATNLMMF
Sbjct: 410  LILLSVCRRALPALPISITLGIIFYFLTRLLMEPFIVGTATNLMMF 455


>ref|XP_003520917.1| PREDICTED: presenilin-like protein At1g08700-like [Glycine max]
          Length = 385

 Score =  314 bits (804), Expect = 3e-83
 Identities = 191/306 (62%), Positives = 204/306 (66%), Gaps = 1/306 (0%)
 Frame = -2

Query: 1097 GSIFLSLIQRFSLPLDSPTCFLLLLNFTVVGVLSIF-SAAVPILLRQGYMVSLGIIVAAW 921
            GSI LSL+QRFSLPLD+ T FLLL NF+VVGVLS+F S  +PILLRQ Y V LGIIVAAW
Sbjct: 113  GSILLSLLQRFSLPLDAVTSFLLLFNFSVVGVLSVFASGGLPILLRQCYTVCLGIIVAAW 172

Query: 920  FTRLPEWTTWTXXXXXXXXXXXXXXAPGGPLKLLVDLASSRDEELPALVYEARPTVAPTG 741
            FT+LPEWTTWT              APGGPLKLLV+LASSRDEELPALVYEARPTV    
Sbjct: 173  FTKLPEWTTWTLLVALALYDLVAVLAPGGPLKLLVELASSRDEELPALVYEARPTV---- 228

Query: 740  RXXXXXXXXXXXXXXXXXSDSETPRSIELQAVPPXXXXXXXXXXXXXRIIDNEEEERSPL 561
                              SDSET R IELQ V                   N+E ERSPL
Sbjct: 229  NTRNHAAAVGFIVTTAGVSDSETSR-IELQVVSRDNDNNNNENEI------NDEGERSPL 281

Query: 560  VGVDEEMSPLVEVIXXXXXXXXXXXXXXXXXXXXXXXXXGIKLGLGDFVFYSVLVGRAAM 381
            VG +EE   +   I                         GIKLGLGDFVFYSVLVGRA+M
Sbjct: 282  VGRNEEEEGVRREI----------------------GERGIKLGLGDFVFYSVLVGRASM 319

Query: 380  YDLMTVYACYLAIISGLGCTLILLSVCRRALPALPISITLGVLFYFLTRLLMEPFIVGTA 201
            YDLMTVYACYLAIISGLGCTLILLSVCR+ALPALPISI LGVLFYFLTRLLMEPFIVGTA
Sbjct: 320  YDLMTVYACYLAIISGLGCTLILLSVCRKALPALPISIALGVLFYFLTRLLMEPFIVGTA 379

Query: 200  TNLMMF 183
            TNL+MF
Sbjct: 380  TNLIMF 385


>ref|XP_003554065.1| PREDICTED: presenilin-like protein At1g08700-like [Glycine max]
          Length = 417

 Score =  311 bits (797), Expect = 2e-82
 Identities = 191/317 (60%), Positives = 206/317 (64%), Gaps = 12/317 (3%)
 Frame = -2

Query: 1097 GSIFLSLIQRFSLPLDSPTCFLLLLNFTVVGVLSIFSAA-VPILLRQGYMVSLGIIVAAW 921
            GSI LSL++RFS+PLD+ T FLLL NF VVGVLS+F+   +PILLRQ Y V LGIIVAAW
Sbjct: 114  GSILLSLLERFSVPLDAVTSFLLLFNFAVVGVLSVFAGGGLPILLRQCYTVCLGIIVAAW 173

Query: 920  FTRLPEWTTWTXXXXXXXXXXXXXXAPGGPLKLLVDLASSRDEELPALVYEARPTVAPTG 741
            FT+LPEWTTWT              APGGPLKLLV+L SSR+EELPALVYEARPTV    
Sbjct: 174  FTKLPEWTTWTVLVALALYDLVAVLAPGGPLKLLVELESSRNEELPALVYEARPTVNTRN 233

Query: 740  RXXXXXXXXXXXXXXXXXSDSETPRSIELQAVPPXXXXXXXXXXXXXRIIDN---EEEER 570
                               DSET R IELQ V                  +N   +E ER
Sbjct: 234  HAAAVGFIVAGVS------DSETSR-IELQVVSRVNSNNNNNLSSNNDNGENGINDEWER 286

Query: 569  SPLVG--------VDEEMSPLVEVIXXXXXXXXXXXXXXXXXXXXXXXXXGIKLGLGDFV 414
            SPLVG        VDE MSPLVE+                          GIK GLGDFV
Sbjct: 287  SPLVGGMRFGEVVVDEGMSPLVEM------SGVGENEEEGEGVRRKIGERGIKFGLGDFV 340

Query: 413  FYSVLVGRAAMYDLMTVYACYLAIISGLGCTLILLSVCRRALPALPISITLGVLFYFLTR 234
            FYSVLVGRAAMYDLMTVYACYLAIISGLGCTLILLS+CR+ALPALPISI LGVLFYFLTR
Sbjct: 341  FYSVLVGRAAMYDLMTVYACYLAIISGLGCTLILLSMCRKALPALPISIALGVLFYFLTR 400

Query: 233  LLMEPFIVGTATNLMMF 183
            LLMEPFIVGTATNLMMF
Sbjct: 401  LLMEPFIVGTATNLMMF 417


Top