BLASTX nr result
ID: Glycyrrhiza24_contig00021149
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza24_contig00021149
(313 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003613018.1| Pentatricopeptide repeat-containing protein ... 85 2e-22
ref|XP_002889138.1| hypothetical protein ARALYDRAFT_476899 [Arab... 67 2e-22
emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera] 75 3e-18
ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containi... 75 3e-18
ref|XP_002531694.1| pentatricopeptide repeat-containing protein,... 57 1e-17
>ref|XP_003613018.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514353|gb|AES95976.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 894
Score = 84.7 bits (208), Expect(2) = 2e-22
Identities = 37/53 (69%), Positives = 45/53 (84%)
Frame = +3
Query: 3 LYKEMLNDGVYPNLVTFNTMLNAHCKLGNVVAAKLYLTRLVKGGFCPDAFTYT 161
L+K+MLNDGV PNL++FNTM+NAHCK+GNVV AK Y L+K GFC D+FTYT
Sbjct: 177 LFKDMLNDGVEPNLISFNTMVNAHCKIGNVVVAKAYFCGLMKFGFCCDSFTYT 229
Score = 46.2 bits (108), Expect(2) = 2e-22
Identities = 22/50 (44%), Positives = 30/50 (60%)
Frame = +1
Query: 163 EDGCFPTVRTYTVLIGALCRSGRETEALRFFEEIGERGCEPNVYTYTVLI 312
++GC +YT LI C G+ EAL F ++ E GC P+V TYTVL+
Sbjct: 253 QEGCLRNEVSYTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTVLV 302
Score = 81.6 bits (200), Expect = 6e-14
Identities = 37/50 (74%), Positives = 41/50 (82%)
Frame = +1
Query: 163 EDGCFPTVRTYTVLIGALCRSGRETEALRFFEEIGERGCEPNVYTYTVLI 312
EDGCFP V TYTVL+ A C G+ETEAL+FFEE+ E G EPNVYTYTVLI
Sbjct: 288 EDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLI 337
Score = 43.5 bits (101), Expect(2) = 2e-07
Identities = 20/45 (44%), Positives = 26/45 (57%)
Frame = +1
Query: 178 PTVRTYTVLIGALCRSGRETEALRFFEEIGERGCEPNVYTYTVLI 312
PTV TYT+LI + R A F +++ GC+PNV TYT I
Sbjct: 573 PTVHTYTILIEEILRESDFDRANMFLDQMISSGCQPNVVTYTAFI 617
Score = 36.2 bits (82), Expect(2) = 2e-07
Identities = 20/53 (37%), Positives = 28/53 (52%)
Frame = +3
Query: 3 LYKEMLNDGVYPNLVTFNTMLNAHCKLGNVVAAKLYLTRLVKGGFCPDAFTYT 161
L+K ML +G +PN +TFN +L+ K G V A + + K P TYT
Sbjct: 527 LFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYT 579
>ref|XP_002889138.1| hypothetical protein ARALYDRAFT_476899 [Arabidopsis lyrata subsp.
lyrata] gi|297334979|gb|EFH65397.1| hypothetical protein
ARALYDRAFT_476899 [Arabidopsis lyrata subsp. lyrata]
Length = 382
Score = 67.0 bits (162), Expect(2) = 2e-22
Identities = 30/56 (53%), Positives = 42/56 (75%)
Frame = +1
Query: 145 MHLHTLEDGCFPTVRTYTVLIGALCRSGRETEALRFFEEIGERGCEPNVYTYTVLI 312
+++ + D C P VRTYTVLI ALC SG+++EAL F+++ E G +P+VY YTVLI
Sbjct: 187 LYMVFIYDNCCPNVRTYTVLIDALCGSGKKSEALNLFKQMSESGIKPDVYMYTVLI 242
Score = 63.5 bits (153), Expect(2) = 2e-22
Identities = 28/51 (54%), Positives = 38/51 (74%)
Frame = +3
Query: 6 YKEMLNDGVYPNLVTFNTMLNAHCKLGNVVAAKLYLTRLVKGGFCPDAFTY 158
Y EML+D V P++ TFNT++N +C LG VV AK Y++RL++ G PD FTY
Sbjct: 110 YTEMLDDLVSPDIYTFNTLVNGYCMLGYVVEAKQYVSRLIQAGLTPDYFTY 160
>emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
Length = 1099
Score = 68.9 bits (167), Expect(2) = 3e-18
Identities = 28/53 (52%), Positives = 41/53 (77%)
Frame = +3
Query: 3 LYKEMLNDGVYPNLVTFNTMLNAHCKLGNVVAAKLYLTRLVKGGFCPDAFTYT 161
+Y E+LN+ + PN+ TFN M+N +CK+GNVV A+LY +++V+ G PD FTYT
Sbjct: 181 VYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYT 233
Score = 47.4 bits (111), Expect(2) = 3e-18
Identities = 24/50 (48%), Positives = 30/50 (60%)
Frame = +1
Query: 163 EDGCFPTVRTYTVLIGALCRSGRETEALRFFEEIGERGCEPNVYTYTVLI 312
+ GC +YT LI LC +GR EAL+ F ++ E C P V TYTVLI
Sbjct: 257 QKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLI 306
Score = 75.5 bits (184), Expect = 4e-12
Identities = 36/50 (72%), Positives = 40/50 (80%)
Frame = +1
Query: 163 EDGCFPTVRTYTVLIGALCRSGRETEALRFFEEIGERGCEPNVYTYTVLI 312
ED C PTVRTYTVLI AL SGR+ EAL F E+ E+GCEPNV+TYTVLI
Sbjct: 292 EDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLI 341
Score = 52.4 bits (124), Expect(2) = 4e-07
Identities = 24/50 (48%), Positives = 30/50 (60%)
Frame = +1
Query: 163 EDGCFPTVRTYTVLIGALCRSGRETEALRFFEEIGERGCEPNVYTYTVLI 312
E GC P V TYTVLI LC+ + EA + E+ E+G P+V TY LI
Sbjct: 327 EKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALI 376
Score = 26.2 bits (56), Expect(2) = 4e-07
Identities = 12/49 (24%), Positives = 21/49 (42%)
Frame = +3
Query: 15 MLNDGVYPNLVTFNTMLNAHCKLGNVVAAKLYLTRLVKGGFCPDAFTYT 161
M G N V++ +++ C+ G + A + + CP TYT
Sbjct: 255 MPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYT 303
Score = 42.4 bits (98), Expect(2) = 2e-06
Identities = 20/48 (41%), Positives = 28/48 (58%)
Frame = +1
Query: 169 GCFPTVRTYTVLIGALCRSGRETEALRFFEEIGERGCEPNVYTYTVLI 312
G PTV TYT+LIG + + G AL+ F + G +P+V TYT +
Sbjct: 574 GVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFL 621
Score = 33.9 bits (76), Expect(2) = 2e-06
Identities = 14/52 (26%), Positives = 28/52 (53%)
Frame = +3
Query: 3 LYKEMLNDGVYPNLVTFNTMLNAHCKLGNVVAAKLYLTRLVKGGFCPDAFTY 158
L+ + GV N V + +++ +CK+G + A L R++ P+++TY
Sbjct: 496 LFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTY 547
Score = 40.0 bits (92), Expect(2) = 5e-06
Identities = 16/53 (30%), Positives = 34/53 (64%)
Frame = +3
Query: 3 LYKEMLNDGVYPNLVTFNTMLNAHCKLGNVVAAKLYLTRLVKGGFCPDAFTYT 161
L +ML + P+L+T+N++++ CK+ ++ +A L+ + + G PD +TY+
Sbjct: 426 LLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYS 478
Score = 35.0 bits (79), Expect(2) = 5e-06
Identities = 17/40 (42%), Positives = 20/40 (50%)
Frame = +1
Query: 193 YTVLIGALCRSGRETEALRFFEEIGERGCEPNVYTYTVLI 312
YT LI C+ G+ A E + C PN YTY VLI
Sbjct: 512 YTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLI 551
>ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
[Vitis vinifera] gi|296084392|emb|CBI24780.3| unnamed
protein product [Vitis vinifera]
Length = 890
Score = 68.9 bits (167), Expect(2) = 3e-18
Identities = 28/53 (52%), Positives = 41/53 (77%)
Frame = +3
Query: 3 LYKEMLNDGVYPNLVTFNTMLNAHCKLGNVVAAKLYLTRLVKGGFCPDAFTYT 161
+Y E+LN+ + PN+ TFN M+N +CK+GNVV A+LY +++V+ G PD FTYT
Sbjct: 181 VYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYT 233
Score = 47.4 bits (111), Expect(2) = 3e-18
Identities = 24/50 (48%), Positives = 30/50 (60%)
Frame = +1
Query: 163 EDGCFPTVRTYTVLIGALCRSGRETEALRFFEEIGERGCEPNVYTYTVLI 312
+ GC +YT LI LC +GR EAL+ F ++ E C P V TYTVLI
Sbjct: 257 QKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLI 306
Score = 75.5 bits (184), Expect = 4e-12
Identities = 36/50 (72%), Positives = 40/50 (80%)
Frame = +1
Query: 163 EDGCFPTVRTYTVLIGALCRSGRETEALRFFEEIGERGCEPNVYTYTVLI 312
ED C PTVRTYTVLI AL SGR+ EAL F E+ E+GCEPNV+TYTVLI
Sbjct: 292 EDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLI 341
Score = 52.4 bits (124), Expect(2) = 4e-07
Identities = 24/50 (48%), Positives = 30/50 (60%)
Frame = +1
Query: 163 EDGCFPTVRTYTVLIGALCRSGRETEALRFFEEIGERGCEPNVYTYTVLI 312
E GC P V TYTVLI LC+ + EA + E+ E+G P+V TY LI
Sbjct: 327 EKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALI 376
Score = 26.2 bits (56), Expect(2) = 4e-07
Identities = 12/49 (24%), Positives = 21/49 (42%)
Frame = +3
Query: 15 MLNDGVYPNLVTFNTMLNAHCKLGNVVAAKLYLTRLVKGGFCPDAFTYT 161
M G N V++ +++ C+ G + A + + CP TYT
Sbjct: 255 MPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYT 303
Score = 42.4 bits (98), Expect(2) = 2e-06
Identities = 20/48 (41%), Positives = 28/48 (58%)
Frame = +1
Query: 169 GCFPTVRTYTVLIGALCRSGRETEALRFFEEIGERGCEPNVYTYTVLI 312
G PTV TYT+LIG + + G AL+ F + G +P+V TYT +
Sbjct: 574 GVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFL 621
Score = 33.9 bits (76), Expect(2) = 2e-06
Identities = 14/52 (26%), Positives = 28/52 (53%)
Frame = +3
Query: 3 LYKEMLNDGVYPNLVTFNTMLNAHCKLGNVVAAKLYLTRLVKGGFCPDAFTY 158
L+ + GV N V + +++ +CK+G + A L R++ P+++TY
Sbjct: 496 LFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTY 547
Score = 40.0 bits (92), Expect(2) = 5e-06
Identities = 16/53 (30%), Positives = 34/53 (64%)
Frame = +3
Query: 3 LYKEMLNDGVYPNLVTFNTMLNAHCKLGNVVAAKLYLTRLVKGGFCPDAFTYT 161
L +ML + P+L+T+N++++ CK+ ++ +A L+ + + G PD +TY+
Sbjct: 426 LLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYS 478
Score = 35.0 bits (79), Expect(2) = 5e-06
Identities = 17/40 (42%), Positives = 20/40 (50%)
Frame = +1
Query: 193 YTVLIGALCRSGRETEALRFFEEIGERGCEPNVYTYTVLI 312
YT LI C+ G+ A E + C PN YTY VLI
Sbjct: 512 YTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLI 551
>ref|XP_002531694.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223528670|gb|EEF30685.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 821
Score = 57.4 bits (137), Expect(2) = 1e-17
Identities = 27/51 (52%), Positives = 33/51 (64%)
Frame = +1
Query: 160 LEDGCFPTVRTYTVLIGALCRSGRETEALRFFEEIGERGCEPNVYTYTVLI 312
++DGC P TY+ LI LC GR EA+ EE+ E+G EP VYTYTV I
Sbjct: 259 VKDGCNPNSVTYSTLINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPI 309
Score = 57.0 bits (136), Expect(2) = 1e-17
Identities = 25/53 (47%), Positives = 35/53 (66%)
Frame = +3
Query: 3 LYKEMLNDGVYPNLVTFNTMLNAHCKLGNVVAAKLYLTRLVKGGFCPDAFTYT 161
+Y ++ + GV P+L+TFNTM+N CK G V A L ++ + CPDAFTYT
Sbjct: 184 VYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVFNKIFQFDLCPDAFTYT 236
Score = 43.1 bits (100), Expect(2) = 9e-09
Identities = 19/48 (39%), Positives = 29/48 (60%)
Frame = +1
Query: 169 GCFPTVRTYTVLIGALCRSGRETEALRFFEEIGERGCEPNVYTYTVLI 312
GC P+V+TYT +I L R+G+ A+ + ++ + G PN TY LI
Sbjct: 332 GCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALI 379
Score = 41.2 bits (95), Expect(2) = 9e-09
Identities = 18/53 (33%), Positives = 29/53 (54%)
Frame = +3
Query: 3 LYKEMLNDGVYPNLVTFNTMLNAHCKLGNVVAAKLYLTRLVKGGFCPDAFTYT 161
++ M+ DG PN VT++T++N C G + A L + + G P +TYT
Sbjct: 254 VFDRMVKDGCNPNSVTYSTLINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYT 306
Score = 50.4 bits (119), Expect(2) = 6e-08
Identities = 21/50 (42%), Positives = 31/50 (62%)
Frame = +1
Query: 163 EDGCFPTVRTYTVLIGALCRSGRETEALRFFEEIGERGCEPNVYTYTVLI 312
E+GC PT+ TY+ L+ LCR GR EA + E + E+G P++ Y L+
Sbjct: 641 ENGCEPTIDTYSTLVSGLCREGRSNEASQLVENMKEKGLSPSMEIYCSLL 690
Score = 31.2 bits (69), Expect(2) = 6e-08
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +3
Query: 12 EMLNDGVYPNLVTFNTMLNAHCKLGNVVAAKLYLTRLVKGGFCPDAFTYT 161
+M G+ PN +T+ +++N CK A + K P+A TYT
Sbjct: 572 KMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYT 621
Score = 53.1 bits (126), Expect(2) = 7e-08
Identities = 24/50 (48%), Positives = 32/50 (64%)
Frame = +1
Query: 163 EDGCFPTVRTYTVLIGALCRSGRETEALRFFEEIGERGCEPNVYTYTVLI 312
E G PTV TYTV I +LC GR +A+ +G++GC P+V TYT +I
Sbjct: 295 EKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAII 344
Score = 28.1 bits (61), Expect(2) = 7e-08
Identities = 12/53 (22%), Positives = 28/53 (52%)
Frame = +3
Query: 3 LYKEMLNDGVYPNLVTFNTMLNAHCKLGNVVAAKLYLTRLVKGGFCPDAFTYT 161
++ ++ + P+ T+ +++ HC+ + A R+VK G P++ TY+
Sbjct: 219 VFNKIFQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYS 271
Score = 45.4 bits (106), Expect(2) = 3e-07
Identities = 21/50 (42%), Positives = 28/50 (56%)
Frame = +1
Query: 163 EDGCFPTVRTYTVLIGALCRSGRETEALRFFEEIGERGCEPNVYTYTVLI 312
E G P TYT LI LC++ A + F E+ ++ C PN +TYT LI
Sbjct: 575 EQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLI 624
Score = 33.9 bits (76), Expect(2) = 3e-07
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = +3
Query: 6 YKEMLNDGVYPNLVTFNTMLNAHCKLGNVVAAKLYLTRLVKGGFCPDAFTY 158
+ EML G+ PN T+ M++ +CK G + A R+ + G TY
Sbjct: 500 FYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETY 550
Score = 42.0 bits (97), Expect(2) = 2e-06
Identities = 19/51 (37%), Positives = 27/51 (52%)
Frame = +1
Query: 160 LEDGCFPTVRTYTVLIGALCRSGRETEALRFFEEIGERGCEPNVYTYTVLI 312
L+ G P TYT +I C+ G+ AL FE + E GC ++ TY +I
Sbjct: 504 LKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAII 554
Score = 34.3 bits (77), Expect(2) = 2e-06
Identities = 17/52 (32%), Positives = 29/52 (55%)
Frame = +3
Query: 3 LYKEMLNDGVYPNLVTFNTMLNAHCKLGNVVAAKLYLTRLVKGGFCPDAFTY 158
++ +ML DG P +VT+NT++ + K G + A +L + + PD TY
Sbjct: 429 VFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTY 480