BLASTX nr result

ID: Glycyrrhiza24_contig00021135 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00021135
         (258 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003523498.1| PREDICTED: exoglucanase xynX-like [Glycine max]   100   1e-19
ref|XP_003527601.1| PREDICTED: probable endo-1,4-beta-xylanase C...    94   2e-17
ref|XP_003604034.1| Endo-1,4-beta-xylanase A [Medicago truncatul...    84   2e-14
ref|NP_195577.2| Glycosyl hydrolase family 10 protein [Arabidops...    67   2e-09
ref|XP_004147070.1| PREDICTED: endo-1,4-beta-xylanase C-like [Cu...    67   2e-09

>ref|XP_003523498.1| PREDICTED: exoglucanase xynX-like [Glycine max]
          Length = 558

 Score =  100 bits (250), Expect = 1e-19
 Identities = 47/73 (64%), Positives = 58/73 (79%), Gaps = 6/73 (8%)
 Frame = +1

Query: 58  PFYDGPLYDSTAYTQCKEQPEKPLYGGGVLNLRS------EASIASYAVNSNMPSLVLYN 219
           P YDGPLYDSTAY +CKE+PE+PLYGGG+ N R       ++SI++ A NS +PSLVLYN
Sbjct: 23  PLYDGPLYDSTAYAECKEKPEEPLYGGGLFNTRRGVEGTIDSSISNVANNSYVPSLVLYN 82

Query: 220 LTQGSIYSFSVWL 258
           LTQG+IYSFS W+
Sbjct: 83  LTQGTIYSFSAWV 95


>ref|XP_003527601.1| PREDICTED: probable endo-1,4-beta-xylanase C-like [Glycine max]
          Length = 547

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 42/64 (65%), Positives = 51/64 (79%)
 Frame = +1

Query: 67  DGPLYDSTAYTQCKEQPEKPLYGGGVLNLRSEASIASYAVNSNMPSLVLYNLTQGSIYSF 246
           +GPLYDSTAYT+CKE+PE+PLYGGG+      +   S A NS +PSLVLYNLTQG+IYSF
Sbjct: 21  NGPLYDSTAYTECKEKPEEPLYGGGLFKTEQHSRRGSIANNSYVPSLVLYNLTQGTIYSF 80

Query: 247 SVWL 258
           S W+
Sbjct: 81  SAWV 84


>ref|XP_003604034.1| Endo-1,4-beta-xylanase A [Medicago truncatula]
           gi|355493082|gb|AES74285.1| Endo-1,4-beta-xylanase A
           [Medicago truncatula]
          Length = 536

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 44/66 (66%), Positives = 51/66 (77%), Gaps = 2/66 (3%)
 Frame = +1

Query: 67  DGPLYDSTAYTQ-CKEQPEKPLYGGGVLNLRSEASIASYAVNSNMP-SLVLYNLTQGSIY 240
           +GPLYD TAYTQ CKE PEKPLYGGGV N++ + + A    N NMP SLVLYNLT  +IY
Sbjct: 10  NGPLYDFTAYTQVCKEHPEKPLYGGGVFNIKDKGN-AVNNTNINMPSSLVLYNLTYDTIY 68

Query: 241 SFSVWL 258
           SFSVW+
Sbjct: 69  SFSVWV 74


>ref|NP_195577.2| Glycosyl hydrolase family 10 protein [Arabidopsis thaliana]
           gi|28416709|gb|AAO42885.1| At4g38650 [Arabidopsis
           thaliana] gi|110743291|dbj|BAE99535.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|332661558|gb|AEE86958.1| Glycosyl hydrolase family 10
           protein [Arabidopsis thaliana]
          Length = 562

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 31/69 (44%), Positives = 46/69 (66%), Gaps = 5/69 (7%)
 Frame = +1

Query: 67  DGPLYDSTAYTQCKEQPEKPLYGGGVL-----NLRSEASIASYAVNSNMPSLVLYNLTQG 231
           DGP YDSTAYT+C+ + EKPLY GG+L     ++  + S+     +   P+ +L+NLTQ 
Sbjct: 30  DGPFYDSTAYTECRAEAEKPLYNGGMLKDQKPSVPGKDSLTGIGAHYT-PTYILHNLTQN 88

Query: 232 SIYSFSVWL 258
           +IY FS+W+
Sbjct: 89  TIYCFSIWV 97


>ref|XP_004147070.1| PREDICTED: endo-1,4-beta-xylanase C-like [Cucumis sativus]
          Length = 532

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 36/70 (51%), Positives = 46/70 (65%), Gaps = 3/70 (4%)
 Frame = +1

Query: 58  PFYDGPLYDSTAYTQCKEQPEKPLYGGGVLNLRSEASIASYAVNSN---MPSLVLYNLTQ 228
           P Y GPLYD TA+T+CK +PEKPLY GG+L      SI S   +SN    P+ +L+NLT 
Sbjct: 3   PIY-GPLYDYTAHTECKLRPEKPLYNGGILK-NQALSIQSIGDSSNAIYSPAFLLHNLTA 60

Query: 229 GSIYSFSVWL 258
            + YSFS W+
Sbjct: 61  RTYYSFSSWV 70


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