BLASTX nr result

ID: Glycyrrhiza24_contig00021082 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00021082
         (381 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003556932.1| PREDICTED: putative SWI/SNF-related matrix-a...   204   8e-51
emb|CBI23583.3| unnamed protein product [Vitis vinifera]              149   3e-34
ref|XP_002280814.1| PREDICTED: putative SWI/SNF-related matrix-a...   149   3e-34
emb|CAN71217.1| hypothetical protein VITISV_033485 [Vitis vinifera]   149   3e-34
ref|XP_002529311.1| DNA repair helicase rad5,16, putative [Ricin...   139   3e-31

>ref|XP_003556932.1| PREDICTED: putative SWI/SNF-related matrix-associated
           actin-dependent regulator of chromatin subfamily A
           member 3-like 3-like [Glycine max]
          Length = 1072

 Score =  204 bits (518), Expect = 8e-51
 Identities = 101/127 (79%), Positives = 110/127 (86%)
 Frame = -1

Query: 381 MMQEIMLLVSVYVHHSVFAESVDTSWRIEACGNINTTAYPLLTLLNMLEIKPYRKAEFTP 202
           MMQEIM LVS YVHHSVFAE VDTSWR+EACG I+ T YPLL LL MLEIKP +KA FTP
Sbjct: 280 MMQEIMFLVSFYVHHSVFAERVDTSWRLEACGKIDDTVYPLLALLKMLEIKPSQKAVFTP 339

Query: 201 EDINSRKRLLYGKLDSDEVAALPMTKRRKGGEPLPEKNEDEQALSESALNKLVGAAEVFD 22
           EDI+SRKRLLY K D DE AALP+ KRRKGGEPLPE+N DEQALSESALNKLVGAAE++D
Sbjct: 340 EDIDSRKRLLYPKADPDEAAALPLIKRRKGGEPLPEQNNDEQALSESALNKLVGAAEIYD 399

Query: 21  LEEMEAP 1
           L+E EAP
Sbjct: 400 LKEKEAP 406


>emb|CBI23583.3| unnamed protein product [Vitis vinifera]
          Length = 1287

 Score =  149 bits (375), Expect = 3e-34
 Identities = 73/128 (57%), Positives = 102/128 (79%), Gaps = 1/128 (0%)
 Frame = -1

Query: 381 MMQEIMLLVSVYVHHSVFAESVDTSWRIEACGNINTTAYPLLTLLNMLEIKPYRKAEFTP 202
           +MQEI+L VS Y+H SVF E   +SWR++A  NI++T YPL TL  +L+IKP+++AEFTP
Sbjct: 426 LMQEIVLYVSFYIHQSVFTEGNKSSWRLDAAPNIDSTVYPLPTLFKLLQIKPFQEAEFTP 485

Query: 201 EDINSRKRLLYGKLDSDEV-AALPMTKRRKGGEPLPEKNEDEQALSESALNKLVGAAEVF 25
           E+++SRKR L  + D+DE  + LP+ K++KG +  PE+N DEQALSES+LNKLVGAA+ +
Sbjct: 486 EELDSRKRKLNLEGDTDEAPSMLPIVKQKKGCQQYPEQNNDEQALSESSLNKLVGAADQY 545

Query: 24  DLEEMEAP 1
           +LEEME+P
Sbjct: 546 NLEEMESP 553


>ref|XP_002280814.1| PREDICTED: putative SWI/SNF-related matrix-associated
           actin-dependent regulator of chromatin subfamily A
           member 3-like 3-like [Vitis vinifera]
          Length = 1224

 Score =  149 bits (375), Expect = 3e-34
 Identities = 73/128 (57%), Positives = 102/128 (79%), Gaps = 1/128 (0%)
 Frame = -1

Query: 381 MMQEIMLLVSVYVHHSVFAESVDTSWRIEACGNINTTAYPLLTLLNMLEIKPYRKAEFTP 202
           +MQEI+L VS Y+H SVF E   +SWR++A  NI++T YPL TL  +L+IKP+++AEFTP
Sbjct: 426 LMQEIVLYVSFYIHQSVFTEGNKSSWRLDAAPNIDSTVYPLPTLFKLLQIKPFQEAEFTP 485

Query: 201 EDINSRKRLLYGKLDSDEV-AALPMTKRRKGGEPLPEKNEDEQALSESALNKLVGAAEVF 25
           E+++SRKR L  + D+DE  + LP+ K++KG +  PE+N DEQALSES+LNKLVGAA+ +
Sbjct: 486 EELDSRKRKLNLEGDTDEAPSMLPIVKQKKGCQQYPEQNNDEQALSESSLNKLVGAADQY 545

Query: 24  DLEEMEAP 1
           +LEEME+P
Sbjct: 546 NLEEMESP 553


>emb|CAN71217.1| hypothetical protein VITISV_033485 [Vitis vinifera]
          Length = 1249

 Score =  149 bits (375), Expect = 3e-34
 Identities = 73/128 (57%), Positives = 102/128 (79%), Gaps = 1/128 (0%)
 Frame = -1

Query: 381 MMQEIMLLVSVYVHHSVFAESVDTSWRIEACGNINTTAYPLLTLLNMLEIKPYRKAEFTP 202
           +MQEI+L VS Y+H SVF E   +SWR++A  NI++T YPL TL  +L+IKP+++AEFTP
Sbjct: 426 LMQEIVLYVSFYIHQSVFTEGNKSSWRLDAAPNIDSTVYPLPTLFKLLQIKPFQEAEFTP 485

Query: 201 EDINSRKRLLYGKLDSDEV-AALPMTKRRKGGEPLPEKNEDEQALSESALNKLVGAAEVF 25
           E+++SRKR L  + D+DE  + LP+ K++KG +  PE+N DEQALSES+LNKLVGAA+ +
Sbjct: 486 EELDSRKRKLNLEGDTDEAPSMLPIVKQKKGCQQYPEQNNDEQALSESSLNKLVGAADQY 545

Query: 24  DLEEMEAP 1
           +LEEME+P
Sbjct: 546 NLEEMESP 553


>ref|XP_002529311.1| DNA repair helicase rad5,16, putative [Ricinus communis]
           gi|223531235|gb|EEF33080.1| DNA repair helicase rad5,16,
           putative [Ricinus communis]
          Length = 1051

 Score =  139 bits (349), Expect = 3e-31
 Identities = 70/127 (55%), Positives = 94/127 (74%)
 Frame = -1

Query: 381 MMQEIMLLVSVYVHHSVFAESVDTSWRIEACGNINTTAYPLLTLLNMLEIKPYRKAEFTP 202
           +MQEIML VS Y+H S+F E   ++WR+EA  N ++T YPLLTL  +L+I PY+KAEFTP
Sbjct: 275 IMQEIMLYVSFYIHSSIFTELDKSTWRLEAHSNADSTIYPLLTLFKLLKIGPYQKAEFTP 334

Query: 201 EDINSRKRLLYGKLDSDEVAALPMTKRRKGGEPLPEKNEDEQALSESALNKLVGAAEVFD 22
           E+++SRKR L   L  +  A LP+ KRR G +   E+N+DEQA+ ES+LNKLVGA + ++
Sbjct: 335 EELDSRKRSL--NLQDEAGAMLPIVKRRMGCQQYLEQNKDEQAILESSLNKLVGAVDTYN 392

Query: 21  LEEMEAP 1
           LEEME P
Sbjct: 393 LEEMEPP 399


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